2-1520687-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520687
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520687
    reference: chr 2
allele count: 2
allele frequency: 1.656836105772417e-5
allele num: 120712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.842T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2380T>C
  hgvsp: ENSP00000371636.3:p.Ser794Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2551T>C
  hgvsp: ENSP00000337263.3:p.Ser851Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.457T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2419T>C
  hgvsp: ENSP00000263886.6:p.Ser807Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.205T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2206T>C
  hgvsp: ENSP00000405788.1:p.Ser736Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2032T>C
  hgvsp: ENSP00000371633.1:p.Ser678Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2032T>C
  hgvsp: ENSP00000332044.3:p.Ser678Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2551T>C
  hgvsp: ENSP00000329869.4:p.Ser851Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.841T>C
  hgvsp: ENSP00000419461.1:p.Ser281Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.975T>C
  hgvsp: ENSP00000400033.1:p.Ser326Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2551T>C
  hgvsp: ENSP00000318820.7:p.Ser851Pro
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.214T>C
  hgvsp: ENSP00000389659.1:p.Ser72Pro
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser851Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

2-1520690-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520690
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520690
    reference: chr 2
allele count: 3
allele frequency: 2.485336514564072e-5
allele num: 120708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.978A>G
  hgvsp: ENSP00000400033.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2035A>G
  hgvsp: ENSP00000332044.3:p.Met679Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2554A>G
  hgvsp: ENSP00000329869.4:p.Met852Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.208A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2554A>G
  hgvsp: ENSP00000318820.7:p.Met852Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2422A>G
  hgvsp: ENSP00000263886.6:p.Met808Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.217A>G
  hgvsp: ENSP00000389659.1:p.Met73Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2554A>G
  hgvsp: ENSP00000337263.3:p.Met852Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2209A>G
  hgvsp: ENSP00000405788.1:p.Met737Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2383A>G
  hgvsp: ENSP00000371636.3:p.Met795Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.844A>G
  hgvsp: ENSP00000419461.1:p.Met282Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2035A>G
  hgvsp: ENSP00000371633.1:p.Met679Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.460A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.845A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met852Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

2-1520694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520694
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520694
    reference: chr 2
allele count: 4
allele frequency: 3.315210184325686e-5
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2558C>T
  hgvsp: ENSP00000329869.4:p.Ser853Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.982C>T
  hgvsp: ENSP00000400033.1:p.Ser328Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2039C>T
  hgvsp: ENSP00000332044.3:p.Ser680Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2426C>T
  hgvsp: ENSP00000263886.6:p.Ser809Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2039C>T
  hgvsp: ENSP00000371633.1:p.Ser680Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2558C>T
  hgvsp: ENSP00000318820.7:p.Ser853Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2213C>T
  hgvsp: ENSP00000405788.1:p.Ser738Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2387C>T
  hgvsp: ENSP00000371636.3:p.Ser796Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2558C>T
  hgvsp: ENSP00000337263.3:p.Ser853Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.212C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.849C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.221C>T
  hgvsp: ENSP00000389659.1:p.Ser74Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.848C>T
  hgvsp: ENSP00000419461.1:p.Ser283Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.464C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser853Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

2-1520695-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520695
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520695
    reference: chr 2
allele count: 4
allele frequency: 3.315594900615043e-5
allele num: 120642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.213G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2427G>A
  hgvsp: ENST00000346956.3:c.2427G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2559G>A
  hgvsp: ENST00000329066.4:c.2559G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2388G>A
  hgvsp: ENST00000382201.3:c.2388G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.222G>A
  hgvsp: ENST00000425083.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2559G>A
  hgvsp: ENST00000337415.3:c.2559G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.849G>A
  hgvsp: ENST00000469607.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2559G>A
  hgvsp: ENST00000345913.4:c.2559G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.983G>A
  hgvsp: ENST00000446278.1:c.983G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.465G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2040G>A
  hgvsp: ENST00000349624.3:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2214G>A
  hgvsp: ENST00000422464.1:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.850G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2040G>A
  hgvsp: ENST00000382198.1:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser853Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-1520711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520711
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520711
    reference: chr 2
allele count: 1
allele frequency: 8.299581701082266e-6
allele num: 120488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2230A>G
  hgvsp: ENSP00000405788.1:p.Ile744Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2443A>G
  hgvsp: ENSP00000263886.6:p.Ile815Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2056A>G
  hgvsp: ENSP00000332044.3:p.Ile686Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2575A>G
  hgvsp: ENSP00000337263.3:p.Ile859Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2575A>G
  hgvsp: ENSP00000318820.7:p.Ile859Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2056A>G
  hgvsp: ENSP00000371633.1:p.Ile686Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2404A>G
  hgvsp: ENSP00000371636.3:p.Ile802Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.229A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2575A>G
  hgvsp: ENSP00000329869.4:p.Ile859Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.481A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.865A>G
  hgvsp: ENSP00000419461.1:p.Ile289Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.999A>G
  hgvsp: ENSP00000400033.1:p.Ile334Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.866A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.238A>G
  hgvsp: ENSP00000389659.1:p.Ile80Val
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile859Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

2-1520713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520713
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520713
    reference: chr 2
allele count: 4
allele frequency: 3.321321221581945e-5
allele num: 120434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1001C>T
  hgvsp: ENST00000446278.1:c.1001C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2058C>T
  hgvsp: ENST00000349624.3:c.2058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.868C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.231C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2577C>T
  hgvsp: ENST00000337415.3:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2406C>T
  hgvsp: ENST00000382201.3:c.2406C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2058C>T
  hgvsp: ENST00000382198.1:c.2058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2577C>T
  hgvsp: ENST00000345913.4:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2232C>T
  hgvsp: ENST00000422464.1:c.2232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2445C>T
  hgvsp: ENST00000346956.3:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.483C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2577C>T
  hgvsp: ENST00000329066.4:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.240C>T
  hgvsp: ENST00000425083.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.867C>T
  hgvsp: ENST00000469607.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ile859Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

2-1520714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520714
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520714
    reference: chr 2
allele count: 3
allele frequency: 2.491156394798465e-5
allele num: 120426
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2578G>A
  hgvsp: ENSP00000318820.7:p.Gly860Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2407G>A
  hgvsp: ENSP00000371636.3:p.Gly803Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.868G>A
  hgvsp: ENSP00000419461.1:p.Gly290Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2233G>A
  hgvsp: ENSP00000405788.1:p.Gly745Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1002G>A
  hgvsp: ENSP00000400033.1:p.Gly335Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.241G>A
  hgvsp: ENSP00000389659.1:p.Gly81Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2446G>A
  hgvsp: ENSP00000263886.6:p.Gly816Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2059G>A
  hgvsp: ENSP00000371633.1:p.Gly687Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2578G>A
  hgvsp: ENSP00000337263.3:p.Gly860Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2059G>A
  hgvsp: ENSP00000332044.3:p.Gly687Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2578G>A
  hgvsp: ENSP00000329869.4:p.Gly860Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.869G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.484G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.232G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly860Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

2-1520718-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520718
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520718
    reference: chr 2
allele count: 1
allele frequency: 8.306613725848521e-6
allele num: 120386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.245G>A
  hgvsp: ENSP00000389659.1:p.Gly82Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.872G>A
  hgvsp: ENSP00000419461.1:p.Gly291Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2582G>A
  hgvsp: ENSP00000329869.4:p.Gly861Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2582G>A
  hgvsp: ENSP00000318820.7:p.Gly861Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2450G>A
  hgvsp: ENSP00000263886.6:p.Gly817Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1006G>A
  hgvsp: ENSP00000400033.1:p.Gly336Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2582G>A
  hgvsp: ENSP00000337263.3:p.Gly861Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2063G>A
  hgvsp: ENSP00000371633.1:p.Gly688Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.488G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2411G>A
  hgvsp: ENSP00000371636.3:p.Gly804Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.873G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.236G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2237G>A
  hgvsp: ENSP00000405788.1:p.Gly746Asp
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2063G>A
  hgvsp: ENSP00000332044.3:p.Gly688Asp
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly861Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

2-1520718-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520718
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520718
    reference: chr 2
allele count: 2
allele frequency: 1.661322745169704e-5
allele num: 120386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2063G>C
  hgvsp: ENSP00000332044.3:p.Gly688Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2450G>C
  hgvsp: ENSP00000263886.6:p.Gly817Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.872G>C
  hgvsp: ENSP00000419461.1:p.Gly291Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2582G>C
  hgvsp: ENSP00000337263.3:p.Gly861Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2582G>C
  hgvsp: ENSP00000329869.4:p.Gly861Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.873G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1006G>C
  hgvsp: ENSP00000400033.1:p.Gly336Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.488G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2063G>C
  hgvsp: ENSP00000371633.1:p.Gly688Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2237G>C
  hgvsp: ENSP00000405788.1:p.Gly746Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2411G>C
  hgvsp: ENSP00000371636.3:p.Gly804Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.236G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.245G>C
  hgvsp: ENSP00000389659.1:p.Gly82Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2582G>C
  hgvsp: ENSP00000318820.7:p.Gly861Ala
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly861Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

2-1520721-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520721
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520721
    reference: chr 2
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2240T>C
  hgvsp: ENSP00000405788.1:p.Phe747Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.239T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2585T>C
  hgvsp: ENSP00000337263.3:p.Phe862Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2066T>C
  hgvsp: ENSP00000371633.1:p.Phe689Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1009T>C
  hgvsp: ENSP00000400033.1:p.Phe337Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2585T>C
  hgvsp: ENSP00000329869.4:p.Phe862Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.491T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2453T>C
  hgvsp: ENSP00000263886.6:p.Phe818Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.248T>C
  hgvsp: ENSP00000389659.1:p.Phe83Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.875T>C
  hgvsp: ENSP00000419461.1:p.Phe292Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2585T>C
  hgvsp: ENSP00000318820.7:p.Phe862Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.876T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2414T>C
  hgvsp: ENSP00000371636.3:p.Phe805Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2066T>C
  hgvsp: ENSP00000332044.3:p.Phe689Ser
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe862Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-1520722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520722
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520722
    reference: chr 2
allele count: 2
allele frequency: 1.66237220513673e-5
allele num: 120310
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2586C>T
  hgvsp: ENST00000345913.4:c.2586C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2415C>T
  hgvsp: ENST00000382201.3:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.876C>T
  hgvsp: ENST00000469607.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2067C>T
  hgvsp: ENST00000349624.3:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1010C>T
  hgvsp: ENST00000446278.1:c.1010C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2241C>T
  hgvsp: ENST00000422464.1:c.2241C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2454C>T
  hgvsp: ENST00000346956.3:c.2454C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2586C>T
  hgvsp: ENST00000337415.3:c.2586C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.249C>T
  hgvsp: ENST00000425083.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2067C>T
  hgvsp: ENST00000382198.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.877C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.492C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2586C>T
  hgvsp: ENST00000329066.4:c.2586C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.240C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe862Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

2-1520723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520723
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520723
    reference: chr 2
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2587G>A
  hgvsp: ENSP00000337263.3:p.Ala863Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.241G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2455G>A
  hgvsp: ENSP00000263886.6:p.Ala819Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.878G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2587G>A
  hgvsp: ENSP00000329869.4:p.Ala863Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2416G>A
  hgvsp: ENSP00000371636.3:p.Ala806Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.877G>A
  hgvsp: ENSP00000419461.1:p.Ala293Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2242G>A
  hgvsp: ENSP00000405788.1:p.Ala748Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2068G>A
  hgvsp: ENSP00000371633.1:p.Ala690Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2587G>A
  hgvsp: ENSP00000318820.7:p.Ala863Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2068G>A
  hgvsp: ENSP00000332044.3:p.Ala690Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.250G>A
  hgvsp: ENSP00000389659.1:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1011G>A
  hgvsp: ENSP00000400033.1:p.Ala338Thr
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.493G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala863Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-1520729-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520729
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520729
    reference: chr 2
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.884C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2593C>G
  hgvsp: ENSP00000337263.3:p.Leu865Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2074C>G
  hgvsp: ENSP00000371633.1:p.Leu692Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2248C>G
  hgvsp: ENSP00000405788.1:p.Leu750Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.883C>G
  hgvsp: ENSP00000419461.1:p.Leu295Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2593C>G
  hgvsp: ENSP00000329869.4:p.Leu865Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2422C>G
  hgvsp: ENSP00000371636.3:p.Leu808Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2461C>G
  hgvsp: ENSP00000263886.6:p.Leu821Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2593C>G
  hgvsp: ENSP00000318820.7:p.Leu865Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1017C>G
  hgvsp: ENSP00000400033.1:p.Leu340Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.256C>G
  hgvsp: ENSP00000389659.1:p.Leu86Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2074C>G
  hgvsp: ENSP00000332044.3:p.Leu692Val
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.247C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.499C>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu865Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-1520731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520731
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520731
    reference: chr 2
allele count: 2
allele frequency: 1.668084538524412e-5
allele num: 119898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2250C>T
  hgvsp: ENST00000422464.1:c.2250C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.258C>T
  hgvsp: ENST00000425083.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2463C>T
  hgvsp: ENST00000346956.3:c.2463C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1019C>T
  hgvsp: ENST00000446278.1:c.1019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.885C>T
  hgvsp: ENST00000469607.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.249C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2424C>T
  hgvsp: ENST00000382201.3:c.2424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.501C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2076C>T
  hgvsp: ENST00000349624.3:c.2076C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2595C>T
  hgvsp: ENST00000329066.4:c.2595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2076C>T
  hgvsp: ENST00000382198.1:c.2076C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2595C>T
  hgvsp: ENST00000345913.4:c.2595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.886C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2595C>T
  hgvsp: ENST00000337415.3:c.2595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9647
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu865Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-1520732-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520732
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520732
    reference: chr 2
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.502A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.886A>G
  hgvsp: ENSP00000419461.1:p.Thr296Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.250A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.259A>G
  hgvsp: ENSP00000389659.1:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2425A>G
  hgvsp: ENSP00000371636.3:p.Thr809Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2596A>G
  hgvsp: ENSP00000329869.4:p.Thr866Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2077A>G
  hgvsp: ENSP00000332044.3:p.Thr693Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2596A>G
  hgvsp: ENSP00000337263.3:p.Thr866Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2464A>G
  hgvsp: ENSP00000263886.6:p.Thr822Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2077A>G
  hgvsp: ENSP00000371633.1:p.Thr693Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2251A>G
  hgvsp: ENSP00000405788.1:p.Thr751Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2596A>G
  hgvsp: ENSP00000318820.7:p.Thr866Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1020A>G
  hgvsp: ENSP00000400033.1:p.Thr341Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.887A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr866Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

2-1520739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520739
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520739
    reference: chr 2
allele count: 13
allele frequency: 1.089854294864271e-4
allele num: 119282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2471C>T
  hgvsp: ENSP00000263886.6:p.Thr824Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.509C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2084C>T
  hgvsp: ENSP00000332044.3:p.Thr695Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2432C>T
  hgvsp: ENSP00000371636.3:p.Thr811Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.266C>T
  hgvsp: ENSP00000389659.1:p.Thr89Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2084C>T
  hgvsp: ENSP00000371633.1:p.Thr695Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2603C>T
  hgvsp: ENSP00000337263.3:p.Thr868Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2603C>T
  hgvsp: ENSP00000318820.7:p.Thr868Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.257C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2258C>T
  hgvsp: ENSP00000405788.1:p.Thr753Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.893C>T
  hgvsp: ENSP00000419461.1:p.Thr298Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1027C>T
  hgvsp: ENSP00000400033.1:p.Thr343Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.894C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2603C>T
  hgvsp: ENSP00000329869.4:p.Thr868Met
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr868Met
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

2-1520740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520740
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520740
    reference: chr 2
allele count: 2
allele frequency: 1.677064466358087e-5
allele num: 119256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2472G>A
  hgvsp: ENST00000346956.3:c.2472G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2085G>A
  hgvsp: ENST00000382198.1:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2604G>A
  hgvsp: ENST00000337415.3:c.2604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2433G>A
  hgvsp: ENST00000382201.3:c.2433G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.267G>A
  hgvsp: ENST00000425083.1:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.895G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2085G>A
  hgvsp: ENST00000349624.3:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2604G>A
  hgvsp: ENST00000329066.4:c.2604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2259G>A
  hgvsp: ENST00000422464.1:c.2259G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2604G>A
  hgvsp: ENST00000345913.4:c.2604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.894G>A
  hgvsp: ENST00000469607.1:c.894G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1028G>A
  hgvsp: ENST00000446278.1:c.1028G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000462973
  gene symbol: TPO
  hgvsc: ENST00000462973.1:n.510G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.258G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr868Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-1520757-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520757
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520757
    reference: chr 2
allele count: 1
allele frequency: 8.643640009680878e-6
allele num: 115692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+3A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+3A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2618+3A>G
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

2-1520767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520767
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520767
    reference: chr 2
allele count: 6
allele frequency: 5.335420075407271e-5
allele num: 112456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+13C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+13C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9831
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

2-1520776-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520776
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520776
    reference: chr 2
allele count: 8
allele frequency: 7.264802034144569e-5
allele num: 110120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+22T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+22T>C
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14610
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15413
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP

2-1520777-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520777
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520778
    reference: chr 2
allele count: 1
allele frequency: 9.110289160577956e-6
allele num: 109766
alternate allele: GT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+25dupT
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+25dupT
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

2-1520783-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520783
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520783
    reference: chr 2
allele count: 1
allele frequency: 9.204712812960235e-6
allele num: 108640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+29T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+29T>C
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-1520784-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520784
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520784
    reference: chr 2
allele count: 1
allele frequency: 9.223900972199163e-6
allele num: 108414
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+30A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+30A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

2-1520787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520787
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520787
    reference: chr 2
allele count: 1
allele frequency: 9.311160356803665e-6
allele num: 107398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+33C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+33C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

2-1520796-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1520796
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1520796
    reference: chr 2
allele count: 1
allele frequency: 9.567363808576184e-6
allele num: 104522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1042+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2099+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2273+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2099+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2486+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2618+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.908+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2618+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2618+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2447+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.909+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.272+42A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.281+42A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18901
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

2-1544315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544315
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544315
    reference: chr 2
allele count: 1
allele frequency: 8.328613785521537e-6
allele num: 120068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1878C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1878C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1878C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1878C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-51C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-51C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-1544321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544321
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544321
    reference: chr 2
allele count: 1
allele frequency: 8.330972891014212e-6
allele num: 120034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1872C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1872C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1872C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1872C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-45C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-45C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

2-1544322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544322
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544322
    reference: chr 2
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1871G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1871G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1871G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-44G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1871G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-44G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

2-1544327-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544327
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544327
    reference: chr 2
allele count: 2
allele frequency: 1.665556295802798e-5
allele num: 120080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1866C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1866C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-39C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1866C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1866C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

2-1544328-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544328
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544328
    reference: chr 2
allele count: 1
allele frequency: 8.327226700419692e-6
allele num: 120088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1865G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1865G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-38G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1865G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1865G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-38G>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

2-1544339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544339
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544339
    reference: chr 2
allele count: 2
allele frequency: 1.664585934248856e-5
allele num: 120150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1854C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1854C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1854C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-27C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1854C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-27C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

2-1544342-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544342
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544342
    reference: chr 2
allele count: 1
allele frequency: 8.32209850035785e-6
allele num: 120162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1851T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1851T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1851T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-24T>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1851T>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

2-1544347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544347
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544347
    reference: chr 2
allele count: 1
allele frequency: 8.319467554076538e-6
allele num: 120200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1846G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1846G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1846G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1846G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-19G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-19G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

2-1544349-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544349
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544349
    reference: chr 2
allele count: 1
allele frequency: 8.317253310266817e-6
allele num: 120232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1844A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1844A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1844A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-17A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1844A>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/2-1544351-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544351
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544351
    reference: chr 2
allele count: 1
allele frequency: 8.316561600771776e-6
allele num: 120242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1842A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1842A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1842A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1842A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-15A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-15A>C
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

2-1544352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544352
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544352
    reference: chr 2
allele count: 5
allele frequency: 4.158419135381493e-5
allele num: 120238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1841C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1841C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-14C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1841C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1841C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-14C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

2-1544353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544353
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544353
    reference: chr 2
allele count: 4
allele frequency: 3.326292680492956e-5
allele num: 120254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1840G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1840G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1840G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1840G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-13G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-13G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-1544354-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544354
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544354
    reference: chr 2
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1839T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1839T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1839T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1839T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-12T>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-12T>C
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

2-1544361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544361
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544361
    reference: chr 2
allele count: 1
allele frequency: 8.309098462816784e-6
allele num: 120350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1832C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1832C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1832C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448-5C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1832C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100-5C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2619-5C>T
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

2-1544366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544366
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544366
    reference: chr 2
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487G>A
  hgvsp: ENSP00000263886.6:p.Trp829Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909G>A
  hgvsp: ENSP00000419461.1:p.Trp303Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619G>A
  hgvsp: ENSP00000329869.4:p.Trp873Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1827G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619G>A
  hgvsp: ENSP00000318820.7:p.Trp873Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100G>A
  hgvsp: ENSP00000371633.1:p.Trp700Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1827G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282G>A
  hgvsp: ENSP00000389659.1:p.Trp94Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274G>A
  hgvsp: ENSP00000405788.1:p.Trp758Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1827G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100G>A
  hgvsp: ENSP00000332044.3:p.Trp700Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448G>A
  hgvsp: ENSP00000371636.3:p.Trp816Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1827G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp873Ter
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

2-1544366-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544366
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544366
    reference: chr 2
allele count: 21
allele frequency: 1.74433092449539e-4
allele num: 120390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2448G>T
  hgvsp: ENSP00000371636.3:p.Trp816Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2619G>T
  hgvsp: ENSP00000329869.4:p.Trp873Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1827G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2619G>T
  hgvsp: ENSP00000318820.7:p.Trp873Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1827G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1827G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.909G>T
  hgvsp: ENSP00000419461.1:p.Trp303Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2100G>T
  hgvsp: ENSP00000371633.1:p.Trp700Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.282G>T
  hgvsp: ENSP00000389659.1:p.Trp94Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2274G>T
  hgvsp: ENSP00000405788.1:p.Trp758Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1827G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2487G>T
  hgvsp: ENSP00000263886.6:p.Trp829Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2100G>T
  hgvsp: ENSP00000332044.3:p.Trp700Cys
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp873Cys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

2-1544370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544370
    reference: chr 2
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2623C>T
  hgvsp: ENSP00000318820.7:p.Arg875Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2278C>T
  hgvsp: ENSP00000405788.1:p.Arg760Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2104C>T
  hgvsp: ENSP00000332044.3:p.Arg702Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2452C>T
  hgvsp: ENSP00000371636.3:p.Arg818Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2623C>T
  hgvsp: ENSP00000329869.4:p.Arg875Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1823C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1823C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.913C>T
  hgvsp: ENSP00000419461.1:p.Arg305Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.286C>T
  hgvsp: ENSP00000389659.1:p.Arg96Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2491C>T
  hgvsp: ENSP00000263886.6:p.Arg831Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2104C>T
  hgvsp: ENSP00000371633.1:p.Arg702Cys
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1823C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1823C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg875Cys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-1544370-CGCACTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544364
    reference: chr 2
allele count: 2
allele frequency: 1.660798511924533e-5
allele num: 120424
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2284_2289delGGCACT
  hgvsp: ENSP00000405788.1:p.Gly762_Thr763del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2110_2115delGGCACT
  hgvsp: ENSP00000332044.3:p.Gly704_Thr705del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2497_2502delGGCACT
  hgvsp: ENSP00000263886.6:p.Gly833_Thr834del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.292_297delGGCACT
  hgvsp: ENSP00000389659.1:p.Gly98_Thr99del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2629_2634delGGCACT
  hgvsp: ENSP00000329869.4:p.Gly877_Thr878del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2458_2463delGGCACT
  hgvsp: ENSP00000371636.3:p.Gly820_Thr821del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.919_924delGGCACT
  hgvsp: ENSP00000419461.1:p.Gly307_Thr308del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2110_2115delGGCACT
  hgvsp: ENSP00000371633.1:p.Gly704_Thr705del
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2629_2634delGGCACT
  hgvsp: ENSP00000318820.7:p.Gly877_Thr878del
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly877_Thr878del
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CGCACTG
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

2-1544371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544371
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544371
    reference: chr 2
allele count: 2
allele frequency: 1.66096402351925e-5
allele num: 120412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2624G>A
  hgvsp: ENSP00000329869.4:p.Arg875His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2105G>A
  hgvsp: ENSP00000371633.1:p.Arg702His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.287G>A
  hgvsp: ENSP00000389659.1:p.Arg96His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2624G>A
  hgvsp: ENSP00000318820.7:p.Arg875His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2492G>A
  hgvsp: ENSP00000263886.6:p.Arg831His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1822G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2453G>A
  hgvsp: ENSP00000371636.3:p.Arg818His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.914G>A
  hgvsp: ENSP00000419461.1:p.Arg305His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1822G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2279G>A
  hgvsp: ENSP00000405788.1:p.Arg760His
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1822G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1822G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2105G>A
  hgvsp: ENSP00000332044.3:p.Arg702His
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg875His
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-1544379-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544379
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544379
    reference: chr 2
allele count: 1
allele frequency: 8.30137304710199e-6
allele num: 120462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1814A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2461A>G
  hgvsp: ENSP00000371636.3:p.Thr821Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1814A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.295A>G
  hgvsp: ENSP00000389659.1:p.Thr99Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2287A>G
  hgvsp: ENSP00000405788.1:p.Thr763Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2632A>G
  hgvsp: ENSP00000329869.4:p.Thr878Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.922A>G
  hgvsp: ENSP00000419461.1:p.Thr308Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1814A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2113A>G
  hgvsp: ENSP00000332044.3:p.Thr705Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2113A>G
  hgvsp: ENSP00000371633.1:p.Thr705Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2500A>G
  hgvsp: ENSP00000263886.6:p.Thr834Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1814A>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2632A>G
  hgvsp: ENSP00000318820.7:p.Thr878Ala
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr878Ala
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-1544380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544380
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544380
    reference: chr 2
allele count: 6
allele frequency: 4.980741134280781e-5
allele num: 120464
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2633C>T
  hgvsp: ENSP00000318820.7:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2288C>T
  hgvsp: ENSP00000405788.1:p.Thr763Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.923C>T
  hgvsp: ENSP00000419461.1:p.Thr308Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2462C>T
  hgvsp: ENSP00000371636.3:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2114C>T
  hgvsp: ENSP00000371633.1:p.Thr705Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1813C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1813C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.296C>T
  hgvsp: ENSP00000389659.1:p.Thr99Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1813C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2501C>T
  hgvsp: ENSP00000263886.6:p.Thr834Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2114C>T
  hgvsp: ENSP00000332044.3:p.Thr705Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2633C>T
  hgvsp: ENSP00000329869.4:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1813C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr878Ile
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

2-1544394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544394
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544394
    reference: chr 2
allele count: 60
allele frequency: 4.98231278959693e-4
allele num: 120426
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2647C>T
  hgvsp: ENSP00000318820.7:p.Pro883Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.937C>T
  hgvsp: ENSP00000419461.1:p.Pro313Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1799C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.310C>T
  hgvsp: ENSP00000389659.1:p.Pro104Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1799C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2302C>T
  hgvsp: ENSP00000405788.1:p.Pro768Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2128C>T
  hgvsp: ENSP00000332044.3:p.Pro710Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1799C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2515C>T
  hgvsp: ENSP00000263886.6:p.Pro839Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2128C>T
  hgvsp: ENSP00000371633.1:p.Pro710Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2476C>T
  hgvsp: ENSP00000371636.3:p.Pro826Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2647C>T
  hgvsp: ENSP00000329869.4:p.Pro883Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1799C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29438
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 11679
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Pro883Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-1544399-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544399
    reference: chr 2
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2307C>G
  hgvsp: ENSP00000405788.1:p.Ile769Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2133C>G
  hgvsp: ENSP00000371633.1:p.Ile711Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2481C>G
  hgvsp: ENSP00000371636.3:p.Ile827Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1794C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1794C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.942C>G
  hgvsp: ENSP00000419461.1:p.Ile314Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1794C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2652C>G
  hgvsp: ENSP00000329869.4:p.Ile884Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2652C>G
  hgvsp: ENSP00000318820.7:p.Ile884Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.315C>G
  hgvsp: ENSP00000389659.1:p.Ile105Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2133C>G
  hgvsp: ENSP00000332044.3:p.Ile711Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2520C>G
  hgvsp: ENSP00000263886.6:p.Ile840Met
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1794C>G
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile884Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

2-1544399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544399
    reference: chr 2
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2307C>T
  hgvsp: ENST00000422464.1:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2652C>T
  hgvsp: ENST00000329066.4:c.2652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.942C>T
  hgvsp: ENST00000469607.1:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2481C>T
  hgvsp: ENST00000382201.3:c.2481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2652C>T
  hgvsp: ENST00000345913.4:c.2652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1794C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1794C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.315C>T
  hgvsp: ENST00000425083.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2520C>T
  hgvsp: ENST00000346956.3:c.2520C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2133C>T
  hgvsp: ENST00000382198.1:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1794C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2133C>T
  hgvsp: ENST00000349624.3:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1794C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile884Ile
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP

2-1544401-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544401
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544401
    reference: chr 2
allele count: 2
allele frequency: 1.661792076575379e-5
allele num: 120352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.317C>T
  hgvsp: ENSP00000389659.1:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2654C>T
  hgvsp: ENSP00000318820.7:p.Ser885Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2654C>T
  hgvsp: ENSP00000329869.4:p.Ser885Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1792C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2309C>T
  hgvsp: ENSP00000405788.1:p.Ser770Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1792C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2135C>T
  hgvsp: ENSP00000332044.3:p.Ser712Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2135C>T
  hgvsp: ENSP00000371633.1:p.Ser712Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2522C>T
  hgvsp: ENSP00000263886.6:p.Ser841Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2483C>T
  hgvsp: ENSP00000371636.3:p.Ser828Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.944C>T
  hgvsp: ENSP00000419461.1:p.Ser315Leu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1792C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1792C>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser885Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

2-1544402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544402
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544402
    reference: chr 2
allele count: 1
allele frequency: 8.309512730173502e-6
allele num: 120344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.318G>A
  hgvsp: ENST00000425083.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2655G>A
  hgvsp: ENST00000345913.4:c.2655G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2310G>A
  hgvsp: ENST00000422464.1:c.2310G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1791G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2136G>A
  hgvsp: ENST00000349624.3:c.2136G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2484G>A
  hgvsp: ENST00000382201.3:c.2484G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2523G>A
  hgvsp: ENST00000346956.3:c.2523G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.945G>A
  hgvsp: ENST00000469607.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2136G>A
  hgvsp: ENST00000382198.1:c.2136G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2655G>A
  hgvsp: ENST00000329066.4:c.2655G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1791G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1791G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1791G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser885Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

2-1544409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544409
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544409
    reference: chr 2
allele count: 1
allele frequency: 8.310065150910783e-6
allele num: 120336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2143G>A
  hgvsp: ENSP00000371633.1:p.Gly715Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1784G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2143G>A
  hgvsp: ENSP00000332044.3:p.Gly715Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.325G>A
  hgvsp: ENSP00000389659.1:p.Gly109Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.952G>A
  hgvsp: ENSP00000419461.1:p.Gly318Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1784G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2662G>A
  hgvsp: ENSP00000318820.7:p.Gly888Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2530G>A
  hgvsp: ENSP00000263886.6:p.Gly844Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2317G>A
  hgvsp: ENSP00000405788.1:p.Gly773Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2491G>A
  hgvsp: ENSP00000371636.3:p.Gly831Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1784G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2662G>A
  hgvsp: ENSP00000329869.4:p.Gly888Ser
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1784G>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly888Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

2-1544411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544411
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544411
    reference: chr 2
allele count: 3
allele frequency: 2.493558307705095e-5
allele num: 120310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2319C>T
  hgvsp: ENST00000422464.1:c.2319C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2664C>T
  hgvsp: ENST00000329066.4:c.2664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1782C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2145C>T
  hgvsp: ENST00000349624.3:c.2145C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1782C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2532C>T
  hgvsp: ENST00000346956.3:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1782C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.327C>T
  hgvsp: ENST00000425083.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.954C>T
  hgvsp: ENST00000469607.1:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2664C>T
  hgvsp: ENST00000345913.4:c.2664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2493C>T
  hgvsp: ENST00000382201.3:c.2493C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1782C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2145C>T
  hgvsp: ENST00000382198.1:c.2145C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly888Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-1544412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544412
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544412
    reference: chr 2
allele count: 5
allele frequency: 4.156137784279825e-5
allele num: 120304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1781G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2146G>A
  hgvsp: ENSP00000332044.3:p.Gly716Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1781G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2494G>A
  hgvsp: ENSP00000371636.3:p.Gly832Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2146G>A
  hgvsp: ENSP00000371633.1:p.Gly716Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1781G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.955G>A
  hgvsp: ENSP00000419461.1:p.Gly319Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2533G>A
  hgvsp: ENSP00000263886.6:p.Gly845Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2320G>A
  hgvsp: ENSP00000405788.1:p.Gly774Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2665G>A
  hgvsp: ENSP00000318820.7:p.Gly889Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1781G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.328G>A
  hgvsp: ENSP00000389659.1:p.Gly110Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2665G>A
  hgvsp: ENSP00000329869.4:p.Gly889Arg
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly889Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

2-1544413-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544413
    reference: chr 2
allele count: 1
allele frequency: 8.311032063961702e-6
allele num: 120322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2534G>C
  hgvsp: ENSP00000263886.6:p.Gly845Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1780G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2147G>C
  hgvsp: ENSP00000371633.1:p.Gly716Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1780G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2321G>C
  hgvsp: ENSP00000405788.1:p.Gly774Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.956G>C
  hgvsp: ENSP00000419461.1:p.Gly319Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1780G>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2495G>C
  hgvsp: ENSP00000371636.3:p.Gly832Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.329G>C
  hgvsp: ENSP00000389659.1:p.Gly110Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2147G>C
  hgvsp: ENSP00000332044.3:p.Gly716Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2666G>C
  hgvsp: ENSP00000329869.4:p.Gly889Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2666G>C
  hgvsp: ENSP00000318820.7:p.Gly889Ala
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1780G>C
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly889Ala
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-1544414-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544414
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544414
    reference: chr 2
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2496A>C
  hgvsp: ENST00000382201.3:c.2496A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2148A>C
  hgvsp: ENST00000382198.1:c.2148A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2322A>C
  hgvsp: ENST00000422464.1:c.2322A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2667A>C
  hgvsp: ENST00000345913.4:c.2667A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1779A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1779A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2667A>C
  hgvsp: ENST00000329066.4:c.2667A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2535A>C
  hgvsp: ENST00000346956.3:c.2535A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1779A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1779A>C
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.957A>C
  hgvsp: ENST00000469607.1:c.957A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.330A>C
  hgvsp: ENST00000425083.1:c.330A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2148A>C
  hgvsp: ENST00000349624.3:c.2148A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly889Gly
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

2-1544419-C-CTCCCGAGCTGAGATGCGGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544419
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544439
    reference: chr 2
allele count: 11
allele frequency: 9.146392164036385e-5
allele num: 120266
alternate allele: CTCCCGAGCTGAGATGCGGAA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsp: ENSP00000419461.1:p.Lys328IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsp: ENSP00000389659.1:p.Lys119IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsp: ENSP00000371633.1:p.Lys725IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsp: ENSP00000263886.6:p.Lys854IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsp: ENSP00000332044.3:p.Lys725IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsp: ENSP00000371636.3:p.Lys841IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsp: ENSP00000405788.1:p.Lys783IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsp: ENSP00000318820.7:p.Lys898IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsp: ENSP00000329869.4:p.Lys898IlefsTer4
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys898IlefsTer4
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

2-1544423-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544423
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544423
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 120252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2157C>G
  hgvsp: ENST00000349624.3:c.2157C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1770C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1770C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2676C>G
  hgvsp: ENST00000329066.4:c.2676C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2676C>G
  hgvsp: ENST00000345913.4:c.2676C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1770C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1770C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2505C>G
  hgvsp: ENST00000382201.3:c.2505C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.966C>G
  hgvsp: ENST00000469607.1:c.966C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.339C>G
  hgvsp: ENST00000425083.1:c.339C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2157C>G
  hgvsp: ENST00000382198.1:c.2157C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2331C>G
  hgvsp: ENST00000422464.1:c.2331C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2544C>G
  hgvsp: ENST00000346956.3:c.2544C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro892Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-1544429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544429
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544429
    reference: chr 2
allele count: 1
allele frequency: 8.319190709127816e-6
allele num: 120204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.972G>A
  hgvsp: ENST00000469607.1:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2511G>A
  hgvsp: ENST00000382201.3:c.2511G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1764G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2337G>A
  hgvsp: ENST00000422464.1:c.2337G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1764G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2682G>A
  hgvsp: ENST00000345913.4:c.2682G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2550G>A
  hgvsp: ENST00000346956.3:c.2550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.345G>A
  hgvsp: ENST00000425083.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2163G>A
  hgvsp: ENST00000382198.1:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2682G>A
  hgvsp: ENST00000329066.4:c.2682G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1764G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1764G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2163G>A
  hgvsp: ENST00000349624.3:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu894Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ

2-1544433-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544433
    reference: chr 2
allele count: 5
allele frequency: 4.160287559076083e-5
allele num: 120184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.349T>G
  hgvsp: ENSP00000389659.1:p.Cys117Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.976T>G
  hgvsp: ENSP00000419461.1:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1760T>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1760T>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2686T>G
  hgvsp: ENSP00000329869.4:p.Cys896Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2515T>G
  hgvsp: ENSP00000371636.3:p.Cys839Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2341T>G
  hgvsp: ENSP00000405788.1:p.Cys781Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2167T>G
  hgvsp: ENSP00000371633.1:p.Cys723Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2167T>G
  hgvsp: ENSP00000332044.3:p.Cys723Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2686T>G
  hgvsp: ENSP00000318820.7:p.Cys896Gly
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1760T>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1760T>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2554T>G
  hgvsp: ENSP00000263886.6:p.Cys852Gly
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys896Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

2-1544434-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544434
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544434
    reference: chr 2
allele count: 1
allele frequency: 8.321821480285606e-6
allele num: 120166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1759G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2687G>T
  hgvsp: ENSP00000318820.7:p.Cys896Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2516G>T
  hgvsp: ENSP00000371636.3:p.Cys839Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2687G>T
  hgvsp: ENSP00000329869.4:p.Cys896Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2168G>T
  hgvsp: ENSP00000371633.1:p.Cys723Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.977G>T
  hgvsp: ENSP00000419461.1:p.Cys326Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1759G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.350G>T
  hgvsp: ENSP00000389659.1:p.Cys117Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2168G>T
  hgvsp: ENSP00000332044.3:p.Cys723Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2342G>T
  hgvsp: ENSP00000405788.1:p.Cys781Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1759G>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2555G>T
  hgvsp: ENSP00000263886.6:p.Cys852Phe
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1759G>T
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys896Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-1544435-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544435
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544435
    reference: chr 2
allele count: 5
allele frequency: 4.162296255598289e-5
allele num: 120126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2517C>A
  hgvsp: ENSP00000371636.3:p.Cys839Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2169C>A
  hgvsp: ENSP00000332044.3:p.Cys723Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2688C>A
  hgvsp: ENSP00000318820.7:p.Cys896Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.351C>A
  hgvsp: ENSP00000389659.1:p.Cys117Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1758C>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2688C>A
  hgvsp: ENSP00000329869.4:p.Cys896Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2169C>A
  hgvsp: ENSP00000371633.1:p.Cys723Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2556C>A
  hgvsp: ENSP00000263886.6:p.Cys852Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1758C>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1758C>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2343C>A
  hgvsp: ENSP00000405788.1:p.Cys781Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.978C>A
  hgvsp: ENSP00000419461.1:p.Cys326Ter
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1758C>A
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys896Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-1544436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544436
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544436
    reference: chr 2
allele count: 24
allele frequency: 1.997702641961744e-4
allele num: 120138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1757G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1757G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.979G>A
  hgvsp: ENSP00000419461.1:p.Gly327Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.352G>A
  hgvsp: ENSP00000389659.1:p.Gly118Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2518G>A
  hgvsp: ENSP00000371636.3:p.Gly840Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2689G>A
  hgvsp: ENSP00000318820.7:p.Gly897Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2689G>A
  hgvsp: ENSP00000329869.4:p.Gly897Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1757G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2170G>A
  hgvsp: ENSP00000332044.3:p.Gly724Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2170G>A
  hgvsp: ENSP00000371633.1:p.Gly724Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1757G>A
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2344G>A
  hgvsp: ENSP00000405788.1:p.Gly782Arg
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2557G>A
  hgvsp: ENSP00000263886.6:p.Gly853Arg
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly897Arg
num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-1544438-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544438
    reference: chr 2
allele count: 2
allele frequency: 1.66461364317342e-5
allele num: 120148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1755A>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.354A>T
  hgvsp: ENST00000425083.1:c.354A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2691A>T
  hgvsp: ENST00000345913.4:c.2691A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2520A>T
  hgvsp: ENST00000382201.3:c.2520A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1755A>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2346A>T
  hgvsp: ENST00000422464.1:c.2346A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2172A>T
  hgvsp: ENST00000349624.3:c.2172A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2559A>T
  hgvsp: ENST00000346956.3:c.2559A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1755A>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2691A>T
  hgvsp: ENST00000329066.4:c.2691A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.981A>T
  hgvsp: ENST00000469607.1:c.981A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1755A>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2172A>T
  hgvsp: ENST00000382198.1:c.2172A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly897Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-1544445-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544445
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544445
    reference: chr 2
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2179C>G
  hgvsp: ENSP00000371633.1:p.Gln727Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1748C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.988C>G
  hgvsp: ENSP00000419461.1:p.Gln330Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2566C>G
  hgvsp: ENSP00000263886.6:p.Gln856Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1748C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2698C>G
  hgvsp: ENSP00000329869.4:p.Gln900Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1748C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2698C>G
  hgvsp: ENSP00000318820.7:p.Gln900Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2353C>G
  hgvsp: ENSP00000405788.1:p.Gln785Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.361C>G
  hgvsp: ENSP00000389659.1:p.Gln121Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2179C>G
  hgvsp: ENSP00000332044.3:p.Gln727Glu
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1748C>G
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2527C>G
  hgvsp: ENSP00000371636.3:p.Gln843Glu
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln900Glu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

2-1544450-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1544450
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 1544450
    reference: chr 2
allele count: 33
allele frequency: 2.750871109184575e-4
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000479902
  gene symbol: TPO
  hgvsc: ENST00000479902.1:n.273-1743C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000329869
  ensembl transcript: ENST00000329066
  gene symbol: TPO
  hgvsc: ENST00000329066.4:c.2703C>T
  hgvsp: ENST00000329066.4:c.2703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000419461
  ensembl transcript: ENST00000469607
  gene symbol: TPO
  hgvsc: ENST00000469607.1:c.993C>T
  hgvsp: ENST00000469607.1:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000400033
  ensembl transcript: ENST00000446278
  gene symbol: TPO
  hgvsc: ENST00000446278.1:c.1043-1743C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371633
  ensembl transcript: ENST00000382198
  gene symbol: TPO
  hgvsc: ENST00000382198.1:c.2184C>T
  hgvsp: ENST00000382198.1:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000318820
  ensembl transcript: ENST00000345913
  gene symbol: TPO
  hgvsc: ENST00000345913.4:c.2703C>T
  hgvsp: ENST00000345913.4:c.2703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000389659
  ensembl transcript: ENST00000425083
  gene symbol: TPO
  hgvsc: ENST00000425083.1:c.366C>T
  hgvsp: ENST00000425083.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000337263
  ensembl transcript: ENST00000337415
  gene symbol: TPO
  hgvsc: ENST00000337415.3:c.2619-1743C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000405788
  ensembl transcript: ENST00000422464
  gene symbol: TPO
  hgvsc: ENST00000422464.1:c.2358C>T
  hgvsp: ENST00000422464.1:c.2358C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000371636
  ensembl transcript: ENST00000382201
  gene symbol: TPO
  hgvsc: ENST00000382201.3:c.2532C>T
  hgvsp: ENST00000382201.3:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000332044
  ensembl transcript: ENST00000349624
  gene symbol: TPO
  hgvsc: ENST00000349624.3:c.2184C>T
  hgvsp: ENST00000349624.3:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115705
  ensembl transcript: ENST00000497517
  gene symbol: TPO
  hgvsc: ENST00000497517.2:n.910-1743C>T
  variant of: http://identifiers.org/hgnc/12015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115705
  ensembl protein: ENSP00000263886
  ensembl transcript: ENST00000346956
  gene symbol: TPO
  hgvsc: ENST00000346956.3:c.2571C>T
  hgvsp: ENST00000346956.3:c.2571C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12015
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala901Ala
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 289
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11026
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 406
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 505
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 504
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2294
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40746
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7767
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.06e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.75e-1

FS
type: SiteQuality
SIO_000300: 5.596e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.060857e6

VQSLOD
type: SiteQuality
SIO_000300: -2.994e-1

GenotypeDepth
all individuals: 29366
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 204
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 754
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1612
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 549
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2294
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 504
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.532680627322999e-5
allele num: 66186
num of homozygotes: 0

MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.023157385573493e-5
allele num: 66156
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.935e1

ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511761504505049e-5
allele num: 66148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.059152e6

QD
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MQRankSum
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SIO_000300: 2.64e-1

BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 5.16e-1

VQSLOD
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SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
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SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66070
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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FS
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SIO_000300: 2.628e0

ClippingRankSum
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SIO_000300: 1.3e0

BaseQRankSum
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SIO_000300: -4.443e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.215066828675577e-4
allele num: 16460
num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.027917398413371e-5
allele num: 66052
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BaseQRankSum
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DP
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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SIO_000300: 5.938e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.028100775193798e-5
allele num: 66048
num of homozygotes: 0

Other
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allele count: 0
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African
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allele count: 0
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.72762645914397e-5
allele num: 10280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 6.06e-1

QD
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InbreedingCoeff
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SIO_000300: 1.1e-3

MQ
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SIO_000300: 5.952e1

VQSLOD
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ClippingRankSum
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SIO_000300: -1.254e0

FS
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SIO_000300: 5.74e-1

ReadPosRankSum
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SIO_000300: 3.16e-1

DP
type: SiteQuality
SIO_000300: 2.05064e6

MQRankSum
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SIO_000300: -3.67e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.311e1

VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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MQ
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SIO_000300: 5.952e1

ReadPosRankSum
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SIO_000300: 3.16e-1

InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
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MQRankSum
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DP
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SIO_000300: 2.048943e6

BaseQRankSum
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SIO_000300: 2.99e0

QD
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SIO_000300: 1.282e1

ReadPosRankSum
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SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515518913676043e-5
allele num: 65984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 5.18e-1

BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
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VQSLOD
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QD
type: SiteQuality
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MQRankSum
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SIO_000300: 1.22e-1

MQ
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SIO_000300: 5.907e1

DP
type: SiteQuality
SIO_000300: 2.048758e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.515702679762338e-5
allele num: 65976
num of homozygotes: 0

African
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

MQ
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 1.161170459823502e-4
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num of homozygotes: 0

European (Non-Finnish)
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Other
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European (Finnish)
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African
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Latino
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FS
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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South Asian
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10206
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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South Asian
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Latino
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ReadPosRankSum
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VQSLOD
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DP
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FS
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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allele frequency: 7.009345794392523e-4
allele num: 8560
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European (Finnish)
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Latino
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allele frequency: 1.750393838613688e-4
allele num: 11426
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South Asian
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European (Non-Finnish)
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allele frequency: 7.626834253637999e-5
allele num: 65558
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QD
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BaseQRankSum
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DP
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65540
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African
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allele num: 10148
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East Asian
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Other
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Latino
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South Asian
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European (Finnish)
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FS
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VQSLOD
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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MQ
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DP
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QD
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7583
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60578
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.535947712418301e-5
allele num: 15300
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

MQRankSum
type: SiteQuality
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VQSLOD
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 6.852e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.018e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7522
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 800
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.576351440220966e-5
allele num: 15206
num of homozygotes: 0

Latino
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.9e-3

QD
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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DP
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ClippingRankSum
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SIO_000300: 7.89e-1

ReadPosRankSum
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SIO_000300: -9.59e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669449081803005e-5
allele num: 59900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
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SIO_000300: 0.0e0

VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQ
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SIO_000300: 5.787e1

QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
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allele num: 59332
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

ReadPosRankSum
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ClippingRankSum
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FS
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DP
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MQ
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.727414061150458e-5
allele num: 57890
num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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BaseQRankSum
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SIO_000300: 9.78e-1

ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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African
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European (Finnish)
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.00048e6

MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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Latino
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African
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65642
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DP
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QD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6342
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 452
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522672594938636e-5
allele num: 65674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

ReadPosRankSum
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SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 8.66e-1

FS
type: SiteQuality
SIO_000300: 2.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.93e0

DP
type: SiteQuality
SIO_000300: 2.00143e6

VQSLOD
type: SiteQuality
SIO_000300: -6.571e-1

GenotypeDepth
all individuals: 640
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 1901
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variant carriers: 0

GenotypeQuality
all individuals: 38618
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variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.044974269967419e-5
allele num: 65682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.612e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.44e-1

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 2.002507e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 1980
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1048
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GenotypeQuality
all individuals: 64
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

InbreedingCoeff
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SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.418e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e0

QD
type: SiteQuality
SIO_000300: 8.84e0

DP
type: SiteQuality
SIO_000300: 2.003189e6

GenotypeDepth
all individuals: 2217
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 1040
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 1911
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GenotypeQuality
all individuals: 60
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1992
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
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GenotypeQuality
all individuals: 38957
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 6327
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 600
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042380358392406e-5
allele num: 65738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.69e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

QD
type: SiteQuality
SIO_000300: 1.096e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

DP
type: SiteQuality
SIO_000300: 2.005733e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1993
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GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
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SIO_000300: 1.814e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

DP
type: SiteQuality
SIO_000300: 2.006205e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1992
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

VQSLOD
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FS
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
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DP
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

BaseQRankSum
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SIO_000300: -2.527e0

QD
type: SiteQuality
SIO_000300: 1.072e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519710647092794e-5
allele num: 65802
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

DP
type: SiteQuality
SIO_000300: 2.0081e6

GenotypeDepth
all individuals: 263
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2333
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6323
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.900000000000001e-2

FS
type: SiteQuality
SIO_000300: 3.366e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 2.008486e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

GenotypeDepth
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 418
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variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7980
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
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GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
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GenotypeQuality
all individuals: 39265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6322
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519710647092794e-5
allele num: 65802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.502218071445249e-4
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.58e-1

FS
type: SiteQuality
SIO_000300: 1.756e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

DP
type: SiteQuality
SIO_000300: 2.008966e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.173e1

GenotypeDepth
all individuals: 9799
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 7992
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
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variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6319
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39284
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519387383007172e-5
allele num: 65816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.936858415649816e-4
allele num: 10326
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.00889e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

QD
type: SiteQuality
SIO_000300: 1.306e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

GenotypeDepth
all individuals: 263
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 250
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39293
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
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variant carriers: 0

GenotypeQuality
all individuals: 516
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 128
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 551
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6316
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7989
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519433555170632e-5
allele num: 65814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 3.377e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 2.008884e6

GenotypeDepth
all individuals: 270
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
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variant carriers: 0

GenotypeDepth
all individuals: 2331
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variant carriers: 1

GenotypeDepth
all individuals: 323
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variant carriers: 0

GenotypeQuality
all individuals: 457
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 522
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variant carriers: 0

GenotypeQuality
all individuals: 8010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39362
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-5
allele num: 65880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.259e0

DP
type: SiteQuality
SIO_000300: 2.010396e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-2

QD
type: SiteQuality
SIO_000300: 6.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.84e-1

GenotypeDepth
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 29328
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1046
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 414
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
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GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 8.25e1
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GenotypeQuality
all individuals: 39392
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517174414370676e-5
allele num: 65912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.847e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

DP
type: SiteQuality
SIO_000300: 2.011532e6

GenotypeDepth
all individuals: 247
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11655
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 8.25e1
variant carriers: 3

GenotypeDepth
all individuals: 2226
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29328
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2337
bin: 9.75e1
variant carriers: 11

GenotypeDepth
all individuals: 263
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 9.75e1
variant carriers: 21

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
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allele frequency: 1.732201628269531e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.730913945867217e-4
allele num: 65912
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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MQRankSum
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele num: 10344
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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QD
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DP
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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East Asian
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European (Non-Finnish)
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South Asian
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FS
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MQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65920
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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DP
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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East Asian
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ClippingRankSum
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FS
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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VQSLOD
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MQRankSum
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BaseQRankSum
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DP
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MQ
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FS
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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European (Non-Finnish)
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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QD
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BaseQRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
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South Asian
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African
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele num: 8594
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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SIO_000300: 2.007179e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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DP
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65822
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Other
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South Asian
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East Asian
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European (Finnish)
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Latino
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African
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VQSLOD
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FS
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DP
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8592
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Other
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South Asian
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allele frequency: 1.21153380179307e-4
allele num: 16508
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Non-Finnish)
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allele num: 65794
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South Asian
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 6614
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 1.52012647452268e-4
allele num: 65784
num of homozygotes: 0

East Asian
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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East Asian
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allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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QD
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MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 6.840000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65736
num of homozygotes: 0

East Asian
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Latino
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African
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Other
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European (Finnish)
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South Asian
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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QD
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MQRankSum
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MQ
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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Latino
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African
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Other
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South Asian
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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FS
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DP
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MQ
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.521977352976988e-5
allele num: 65704
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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VQSLOD
type: SiteQuality
SIO_000300: -8.001e-1

MQ
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SIO_000300: 5.968e1

FS
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BaseQRankSum
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SIO_000300: -2.731e0

MQRankSum
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QD
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DP
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SIO_000300: 2.003018e6

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

ReadPosRankSum
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SIO_000300: 2.19e0

ClippingRankSum
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SIO_000300: -1.341e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

African
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allele count: 5
allele frequency: 4.856254856254856e-4
allele num: 10296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65680
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.091e0

ReadPosRankSum
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SIO_000300: 7.12e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

DP
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SIO_000300: 2.002742e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Latino
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allele count: 11
allele frequency: 9.523809523809524e-4
allele num: 11550
num of homozygotes: 0

South Asian
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allele count: 12
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allele num: 16506
num of homozygotes: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

QD
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SIO_000300: 1.351e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQRankSum
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SIO_000300: -1.93e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 3.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.003028e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65696
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 1
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allele num: 8588
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 2.00135e6

QD
type: SiteQuality
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FS
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SIO_000300: 2.165e0

BaseQRankSum
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MQRankSum
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SIO_000300: -4.0e-2

InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

VQSLOD
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SIO_000300: 2.17e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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East Asian
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MQRankSum
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QD
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MQ
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0