3-9792821-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792821
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792822
    reference: chr 3
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.330_331insA
  hgvsp: ENSP00000305527.8:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.330_331insA
  hgvsp: ENSP00000306561.7:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.46_47insA
  hgvsp: ENSP00000344899.5:p.His17ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.330_331insA
  hgvsp: ENSP00000345520.5:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-633_79-632insA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.262_263insA
  hgvsp: ENSP00000393726.1:p.His89ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.330_331insA
  hgvsp: ENSP00000305584.7:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.330_331insA
  hgvsp: ENSP00000303132.6:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.330_331insA
  hgvsp: ENSP00000342851.7:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.59_60insA
  hgvsp: ENSP00000399810.1:p.His21ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.330_331insA
  hgvsp: ENSP00000403598.2:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.330_331insA
  hgvsp: ENSP00000373337.5:p.His111ThrfsTer64
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+714_137+715insA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.174_175insA
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His111ThrfsTer64
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

3-9792822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792822
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792822
    reference: chr 3
allele count: 1
allele frequency: 8.314763694415805e-6
allele num: 120268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.331C>T
  hgvsp: ENSP00000345520.5:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.60C>T
  hgvsp: ENSP00000399810.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-632C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.331C>T
  hgvsp: ENSP00000305527.8:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.331C>T
  hgvsp: ENSP00000373337.5:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.263C>T
  hgvsp: ENSP00000393726.1:p.His89Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.331C>T
  hgvsp: ENSP00000306561.7:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.331C>T
  hgvsp: ENSP00000403598.2:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+715C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.175C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.331C>T
  hgvsp: ENSP00000303132.6:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.331C>T
  hgvsp: ENSP00000342851.7:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.331C>T
  hgvsp: ENSP00000305584.7:p.His111Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.47C>T
  hgvsp: ENSP00000344899.5:p.His17Tyr
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His111Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

3-9792826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792826
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792826
    reference: chr 3
allele count: 1
allele frequency: 8.320990530712775e-6
allele num: 120178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.64A>G
  hgvsp: ENSP00000399810.1:p.His22Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.335A>G
  hgvsp: ENSP00000303132.6:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.179A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.335A>G
  hgvsp: ENSP00000373337.5:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.335A>G
  hgvsp: ENSP00000403598.2:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.335A>G
  hgvsp: ENSP00000305584.7:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.335A>G
  hgvsp: ENSP00000342851.7:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.335A>G
  hgvsp: ENSP00000306561.7:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.51A>G
  hgvsp: ENSP00000344899.5:p.His18Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.335A>G
  hgvsp: ENSP00000305527.8:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.335A>G
  hgvsp: ENSP00000345520.5:p.His112Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-628A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.267A>G
  hgvsp: ENSP00000393726.1:p.His90Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+719A>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His112Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

3-9792843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792843
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792843
    reference: chr 3
allele count: 1
allele frequency: 8.392923087252828e-6
allele num: 119148
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.352T>C
  hgvsp: ENSP00000306561.7:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.352T>C
  hgvsp: ENSP00000345520.5:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.352T>C
  hgvsp: ENSP00000342851.7:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-611T>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.352T>C
  hgvsp: ENSP00000403598.2:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.284T>C
  hgvsp: ENSP00000393726.1:p.Ser96Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.81T>C
  hgvsp: ENSP00000399810.1:p.Ser28Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.352T>C
  hgvsp: ENSP00000303132.6:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+736T>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.352T>C
  hgvsp: ENSP00000373337.5:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.196T>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.352T>C
  hgvsp: ENSP00000305584.7:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.352T>C
  hgvsp: ENSP00000305527.8:p.Ser118Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.68T>C
  hgvsp: ENSP00000344899.5:p.Ser24Pro
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser118Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

3-9792851-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792851
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792851
    reference: chr 3
allele count: 1
allele frequency: 8.48147645542136e-6
allele num: 117904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.360C>G
  hgvsp: ENSP00000303132.6:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.89C>G
  hgvsp: ENSP00000399810.1:p.Phe30Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.360C>G
  hgvsp: ENSP00000342851.7:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.360C>G
  hgvsp: ENSP00000305584.7:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.292C>G
  hgvsp: ENSP00000393726.1:p.Phe98Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.204C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.360C>G
  hgvsp: ENSP00000345520.5:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.360C>G
  hgvsp: ENSP00000306561.7:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.76C>G
  hgvsp: ENSP00000344899.5:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.360C>G
  hgvsp: ENSP00000403598.2:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.360C>G
  hgvsp: ENSP00000373337.5:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-603C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.360C>G
  hgvsp: ENSP00000305527.8:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+744C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21136
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe120Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

3-9792860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792860
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792860
    reference: chr 3
allele count: 6
allele frequency: 5.147475163432337e-5
allele num: 116562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+753G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.369G>A
  hgvsp: ENST00000302008.8:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.369G>A
  hgvsp: ENST00000344629.7:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.369G>A
  hgvsp: ENST00000449570.2:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.369G>A
  hgvsp: ENST00000302036.7:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.98G>A
  hgvsp: ENST00000426518.1:c.98G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.85G>A
  hgvsp: ENST00000352937.5:c.85G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.213G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.369G>A
  hgvsp: ENST00000339511.5:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.369G>A
  hgvsp: ENST00000349503.5:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.369G>A
  hgvsp: ENST00000302003.7:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.369G>A
  hgvsp: ENST00000383826.5:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-594G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.301G>A
  hgvsp: ENST00000429146.1:c.301G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22938
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val123Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-9792866-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792866
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792866
    reference: chr 3
allele count: 1
allele frequency: 8.681761355743853e-6
allele num: 115184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.375G>C
  hgvsp: ENSP00000342851.7:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.375G>C
  hgvsp: ENSP00000305584.7:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.375G>C
  hgvsp: ENSP00000305527.8:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.375G>C
  hgvsp: ENSP00000373337.5:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.104G>C
  hgvsp: ENSP00000399810.1:p.Gln35His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.307G>C
  hgvsp: ENSP00000393726.1:p.Gln103His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-588G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.375G>C
  hgvsp: ENSP00000403598.2:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.91G>C
  hgvsp: ENSP00000344899.5:p.Gln31His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.375G>C
  hgvsp: ENSP00000303132.6:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+759G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.375G>C
  hgvsp: ENSP00000306561.7:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.375G>C
  hgvsp: ENSP00000345520.5:p.Gln125His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.219G>C
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21727
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln125His
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-9792886-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792886
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792886
    reference: chr 3
allele count: 2
allele frequency: 1.823320266204759e-5
allele num: 109690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+779G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-568G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+10G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+10G>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

3-9792890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792890
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792890
    reference: chr 3
allele count: 1
allele frequency: 9.215570628133294e-6
allele num: 108512
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-564C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+783C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+14C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14742
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

3-9792895-C-CTGGGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792895
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792901
    reference: chr 3
allele count: 1
allele frequency: 9.352437245146085e-6
allele num: 106924
alternate allele: CTGGGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+21_101+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+790_137+795dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+21_229+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+21_317+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+21_114+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+21_385+26dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-557_79-552dupGGGGTT
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17965
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

3-9792895-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792895
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792895
    reference: chr 3
allele count: 1
allele frequency: 9.352437245146085e-6
allele num: 106924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-559C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+788C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+19C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+19C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17965
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

3-9792904-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792904
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792904
    reference: chr 3
allele count: 9
allele frequency: 8.641382621219396e-5
allele num: 104150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+797G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+28G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-550G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+28G>A
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22001
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-9792912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792912
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792912
    reference: chr 3
allele count: 1
allele frequency: 9.885330170027678e-6
allele num: 101160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-542G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+36G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+805G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+36G>A
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

3-9792922-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9792922
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9792922
    reference: chr 3
allele count: 1
allele frequency: 1.043906716495814e-5
allele num: 95794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.101+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.229+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+815C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.114+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.317+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-532C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.385+46C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12563
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-9793430-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793430
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793429
    reference: chr 3
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1328delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.230-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.318-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.115-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.386-19delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.102-19delC
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: AC
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

3-9793433-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793433
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793433
    reference: chr 3
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.102-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.230-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.115-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1326C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.318-21C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.386-21C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

3-9793434-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793434
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793434
    reference: chr 3
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.318-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1327C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.102-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.115-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.230-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.386-20C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

3-9793443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793443
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793443
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.230-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.115-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.318-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.102-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1336C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.386-11C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

3-9793454-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793454
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793454
    reference: chr 3
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.79G>C
  hgvsp: ENSP00000390337.1:p.Gly27Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.386G>C
  hgvsp: ENSP00000373337.5:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.386G>C
  hgvsp: ENSP00000303132.6:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.386G>C
  hgvsp: ENSP00000305584.7:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.386G>C
  hgvsp: ENSP00000306561.7:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.386G>C
  hgvsp: ENSP00000403598.2:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.115G>C
  hgvsp: ENSP00000399810.1:p.Gly39Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.102G>C
  hgvsp: ENSP00000344899.5:p.Gly35Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.386G>C
  hgvsp: ENSP00000345520.5:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.318G>C
  hgvsp: ENSP00000393726.1:p.Gly107Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1347G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.386G>C
  hgvsp: ENSP00000305527.8:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.386G>C
  hgvsp: ENSP00000342851.7:p.Gly129Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.230G>C
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly129Ala
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-9793459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793459
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793459
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.84C>T
  hgvsp: ENSP00000390337.1:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.391C>T
  hgvsp: ENSP00000305584.7:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.391C>T
  hgvsp: ENSP00000342851.7:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.120C>T
  hgvsp: ENSP00000399810.1:p.Arg41Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.391C>T
  hgvsp: ENSP00000403598.2:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1352C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.391C>T
  hgvsp: ENSP00000345520.5:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.391C>T
  hgvsp: ENSP00000306561.7:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.391C>T
  hgvsp: ENSP00000373337.5:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.107C>T
  hgvsp: ENSP00000344899.5:p.Arg37Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.391C>T
  hgvsp: ENSP00000303132.6:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.235C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.391C>T
  hgvsp: ENSP00000305527.8:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.323C>T
  hgvsp: ENSP00000393726.1:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg131Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

3-9793460-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793460
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793460
    reference: chr 3
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.392G>A
  hgvsp: ENSP00000305584.7:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.121G>A
  hgvsp: ENSP00000399810.1:p.Arg41Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.392G>A
  hgvsp: ENSP00000373337.5:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.392G>A
  hgvsp: ENSP00000306561.7:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.392G>A
  hgvsp: ENSP00000403598.2:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.392G>A
  hgvsp: ENSP00000342851.7:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.392G>A
  hgvsp: ENSP00000303132.6:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.324G>A
  hgvsp: ENSP00000393726.1:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.108G>A
  hgvsp: ENSP00000344899.5:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.392G>A
  hgvsp: ENSP00000305527.8:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1353G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.236G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.392G>A
  hgvsp: ENSP00000345520.5:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.85G>A
  hgvsp: ENSP00000390337.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg131Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

3-9793469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793469
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793469
    reference: chr 3
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1362G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.117G>A
  hgvsp: ENSP00000344899.5:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.401G>A
  hgvsp: ENSP00000306561.7:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.94G>A
  hgvsp: ENSP00000390337.1:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.401G>A
  hgvsp: ENSP00000303132.6:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.401G>A
  hgvsp: ENSP00000345520.5:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.401G>A
  hgvsp: ENSP00000403598.2:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.401G>A
  hgvsp: ENSP00000373337.5:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.130G>A
  hgvsp: ENSP00000399810.1:p.Arg44Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.401G>A
  hgvsp: ENSP00000342851.7:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.401G>A
  hgvsp: ENSP00000305527.8:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.333G>A
  hgvsp: ENSP00000393726.1:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.245G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.401G>A
  hgvsp: ENSP00000305584.7:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg134Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

3-9793471-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793471
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793471
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.132C>G
  hgvsp: ENSP00000399810.1:p.Gln45Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.403C>G
  hgvsp: ENSP00000345520.5:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.403C>G
  hgvsp: ENSP00000303132.6:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.403C>G
  hgvsp: ENSP00000306561.7:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.119C>G
  hgvsp: ENSP00000344899.5:p.Gln41Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.96C>G
  hgvsp: ENSP00000390337.1:p.Gln33Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1364C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.403C>G
  hgvsp: ENSP00000342851.7:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.403C>G
  hgvsp: ENSP00000305584.7:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.335C>G
  hgvsp: ENSP00000393726.1:p.Gln113Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.403C>G
  hgvsp: ENSP00000305527.8:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.403C>G
  hgvsp: ENSP00000373337.5:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.247C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.403C>G
  hgvsp: ENSP00000403598.2:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln135Glu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS

3-9793474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793474
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793474
    reference: chr 3
allele count: 7
allele frequency: 5.765492702533522e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.406G>A
  hgvsp: ENSP00000345520.5:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.406G>A
  hgvsp: ENSP00000303132.6:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.406G>A
  hgvsp: ENSP00000403598.2:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.406G>A
  hgvsp: ENSP00000342851.7:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.406G>A
  hgvsp: ENSP00000306561.7:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.338G>A
  hgvsp: ENSP00000393726.1:p.Asp114Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.122G>A
  hgvsp: ENSP00000344899.5:p.Asp42Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.135G>A
  hgvsp: ENSP00000399810.1:p.Asp46Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.406G>A
  hgvsp: ENSP00000373337.5:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1367G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.406G>A
  hgvsp: ENSP00000305527.8:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.250G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.406G>A
  hgvsp: ENSP00000305584.7:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.99G>A
  hgvsp: ENSP00000390337.1:p.Asp34Asn
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23234
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp136Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-9793474-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793474
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793474
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.406G>C
  hgvsp: ENSP00000306561.7:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.99G>C
  hgvsp: ENSP00000390337.1:p.Asp34His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.406G>C
  hgvsp: ENSP00000303132.6:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.135G>C
  hgvsp: ENSP00000399810.1:p.Asp46His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.406G>C
  hgvsp: ENSP00000342851.7:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.338G>C
  hgvsp: ENSP00000393726.1:p.Asp114His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.406G>C
  hgvsp: ENSP00000345520.5:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.406G>C
  hgvsp: ENSP00000403598.2:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1367G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.406G>C
  hgvsp: ENSP00000373337.5:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.122G>C
  hgvsp: ENSP00000344899.5:p.Asp42His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.250G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.406G>C
  hgvsp: ENSP00000305584.7:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.406G>C
  hgvsp: ENSP00000305527.8:p.Asp136His
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp136His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

3-9793480-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793480
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793480
    reference: chr 3
allele count: 22
allele frequency: 1.812011992224821e-4
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.412A>G
  hgvsp: ENSP00000373337.5:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.128A>G
  hgvsp: ENSP00000344899.5:p.Ile44Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.412A>G
  hgvsp: ENSP00000342851.7:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.412A>G
  hgvsp: ENSP00000345520.5:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.412A>G
  hgvsp: ENSP00000306561.7:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.412A>G
  hgvsp: ENSP00000303132.6:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.256A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.105A>G
  hgvsp: ENSP00000390337.1:p.Ile36Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.344A>G
  hgvsp: ENSP00000393726.1:p.Ile116Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.141A>G
  hgvsp: ENSP00000399810.1:p.Ile48Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1373A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.412A>G
  hgvsp: ENSP00000305527.8:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.412A>G
  hgvsp: ENSP00000305584.7:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.412A>G
  hgvsp: ENSP00000403598.2:p.Ile138Val
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 23238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16649
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile138Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

3-9793482-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793482
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793482
    reference: chr 3
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.143C>T
  hgvsp: ENST00000426518.1:c.143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.414C>T
  hgvsp: ENST00000344629.7:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.414C>T
  hgvsp: ENST00000383826.5:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.346C>T
  hgvsp: ENST00000429146.1:c.346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.130C>T
  hgvsp: ENST00000352937.5:c.130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.414C>T
  hgvsp: ENST00000302003.7:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.414C>T
  hgvsp: ENST00000302036.7:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.414C>T
  hgvsp: ENST00000349503.5:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.414C>T
  hgvsp: ENST00000449570.2:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.414C>T
  hgvsp: ENST00000339511.5:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1375C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.414C>T
  hgvsp: ENST00000302008.8:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.107C>T
  hgvsp: ENST00000441094.1:c.107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.258C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile138Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

3-9793483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793483
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793483
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.415G>A
  hgvsp: ENSP00000305527.8:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.415G>A
  hgvsp: ENSP00000342851.7:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.415G>A
  hgvsp: ENSP00000303132.6:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.347G>A
  hgvsp: ENSP00000393726.1:p.Glu117Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.415G>A
  hgvsp: ENSP00000403598.2:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.415G>A
  hgvsp: ENSP00000306561.7:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.144G>A
  hgvsp: ENSP00000399810.1:p.Glu49Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1376G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.415G>A
  hgvsp: ENSP00000373337.5:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.131G>A
  hgvsp: ENSP00000344899.5:p.Glu45Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.259G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.108G>A
  hgvsp: ENSP00000390337.1:p.Glu37Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.415G>A
  hgvsp: ENSP00000305584.7:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.415G>A
  hgvsp: ENSP00000345520.5:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu139Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

3-9793487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793487
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793487
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.419G>A
  hgvsp: ENSP00000373337.5:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.148G>A
  hgvsp: ENSP00000399810.1:p.Cys50Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.135G>A
  hgvsp: ENSP00000344899.5:p.Cys46Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1380G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.112G>A
  hgvsp: ENSP00000390337.1:p.Cys38Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.419G>A
  hgvsp: ENSP00000305527.8:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.419G>A
  hgvsp: ENSP00000303132.6:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.419G>A
  hgvsp: ENSP00000305584.7:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.351G>A
  hgvsp: ENSP00000393726.1:p.Cys118Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.419G>A
  hgvsp: ENSP00000345520.5:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.419G>A
  hgvsp: ENSP00000306561.7:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.419G>A
  hgvsp: ENSP00000342851.7:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.419G>A
  hgvsp: ENSP00000403598.2:p.Cys140Tyr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.263G>A
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys140Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-9793509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793509
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793509
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.441C>T
  hgvsp: ENST00000383826.5:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.441C>T
  hgvsp: ENST00000349503.5:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.441C>T
  hgvsp: ENST00000302003.7:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1402C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.441C>T
  hgvsp: ENST00000344629.7:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.441C>T
  hgvsp: ENST00000302036.7:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.441C>T
  hgvsp: ENST00000449570.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.373C>T
  hgvsp: ENST00000429146.1:c.373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.170C>T
  hgvsp: ENST00000426518.1:c.170C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.285C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.441C>T
  hgvsp: ENST00000339511.5:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.134C>T
  hgvsp: ENST00000441094.1:c.134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.157C>T
  hgvsp: ENST00000352937.5:c.157C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.441C>T
  hgvsp: ENST00000302008.8:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser147Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-9793511-CCAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793511
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793508
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.452_454delACA
  hgvsp: ENSP00000345520.5:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.452_454delACA
  hgvsp: ENSP00000303132.6:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.452_454delACA
  hgvsp: ENSP00000306561.7:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.181_183delACA
  hgvsp: ENSP00000399810.1:p.Asn61del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.452_454delACA
  hgvsp: ENSP00000373337.5:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.168_170delACA
  hgvsp: ENSP00000344899.5:p.Asn57del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.452_454delACA
  hgvsp: ENSP00000403598.2:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.296_298delACA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.145_147delACA
  hgvsp: ENSP00000390337.1:p.Asn49del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.452_454delACA
  hgvsp: ENSP00000305584.7:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.384_386delACA
  hgvsp: ENSP00000393726.1:p.Asn129del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1413_137+1415delACA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.452_454delACA
  hgvsp: ENSP00000342851.7:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.452_454delACA
  hgvsp: ENSP00000305527.8:p.Asn151del
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn151del
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CCAA
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

3-9793520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793520
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793520
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.168A>G
  hgvsp: ENSP00000344899.5:p.Asn57Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.181A>G
  hgvsp: ENSP00000399810.1:p.Asn61Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.452A>G
  hgvsp: ENSP00000373337.5:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.452A>G
  hgvsp: ENSP00000403598.2:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.452A>G
  hgvsp: ENSP00000303132.6:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.452A>G
  hgvsp: ENSP00000345520.5:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1413A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.384A>G
  hgvsp: ENSP00000393726.1:p.Asn129Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.145A>G
  hgvsp: ENSP00000390337.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.452A>G
  hgvsp: ENSP00000306561.7:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.296A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.452A>G
  hgvsp: ENSP00000305584.7:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.452A>G
  hgvsp: ENSP00000342851.7:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.452A>G
  hgvsp: ENSP00000305527.8:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn151Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-9793524-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793524
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793524
    reference: chr 3
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.456C>A
  hgvsp: ENST00000344629.7:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.300C>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.456C>A
  hgvsp: ENST00000302036.7:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.456C>A
  hgvsp: ENST00000383826.5:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.185C>A
  hgvsp: ENST00000426518.1:c.185C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.456C>A
  hgvsp: ENST00000449570.2:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.456C>A
  hgvsp: ENST00000302003.7:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1417C>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.456C>A
  hgvsp: ENST00000339511.5:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.456C>A
  hgvsp: ENST00000349503.5:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.388C>A
  hgvsp: ENST00000429146.1:c.388C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.149C>A
  hgvsp: ENST00000441094.1:c.149C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.172C>A
  hgvsp: ENST00000352937.5:c.172C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.456C>A
  hgvsp: ENST00000302008.8:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile152Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

3-9793524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793524
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793524
    reference: chr 3
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.388C>T
  hgvsp: ENST00000429146.1:c.388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.456C>T
  hgvsp: ENST00000302003.7:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.456C>T
  hgvsp: ENST00000349503.5:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.149C>T
  hgvsp: ENST00000441094.1:c.149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.185C>T
  hgvsp: ENST00000426518.1:c.185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.456C>T
  hgvsp: ENST00000449570.2:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.300C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.456C>T
  hgvsp: ENST00000383826.5:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.456C>T
  hgvsp: ENST00000344629.7:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.456C>T
  hgvsp: ENST00000302036.7:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.456C>T
  hgvsp: ENST00000302008.8:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.456C>T
  hgvsp: ENST00000339511.5:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1417C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.172C>T
  hgvsp: ENST00000352937.5:c.172C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile152Ile
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-9793525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793525
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.457G>A
  hgvsp: ENSP00000303132.6:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.457G>A
  hgvsp: ENSP00000342851.7:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.457G>A
  hgvsp: ENSP00000305527.8:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.457G>A
  hgvsp: ENSP00000373337.5:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1418G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.457G>A
  hgvsp: ENSP00000306561.7:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.173G>A
  hgvsp: ENSP00000344899.5:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.301G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.389G>A
  hgvsp: ENSP00000393726.1:p.Ala131Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.457G>A
  hgvsp: ENSP00000403598.2:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.457G>A
  hgvsp: ENSP00000305584.7:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.186G>A
  hgvsp: ENSP00000399810.1:p.Ala63Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.150G>A
  hgvsp: ENSP00000390337.1:p.Ala51Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.457G>A
  hgvsp: ENSP00000345520.5:p.Ala153Thr
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala153Thr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

3-9793525-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793525
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.186G>T
  hgvsp: ENSP00000399810.1:p.Ala63Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.457G>T
  hgvsp: ENSP00000305527.8:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.457G>T
  hgvsp: ENSP00000345520.5:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.457G>T
  hgvsp: ENSP00000306561.7:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.389G>T
  hgvsp: ENSP00000393726.1:p.Ala131Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.457G>T
  hgvsp: ENSP00000305584.7:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.457G>T
  hgvsp: ENSP00000342851.7:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.457G>T
  hgvsp: ENSP00000303132.6:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.173G>T
  hgvsp: ENSP00000344899.5:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1418G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.457G>T
  hgvsp: ENSP00000403598.2:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.150G>T
  hgvsp: ENSP00000390337.1:p.Ala51Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.457G>T
  hgvsp: ENSP00000373337.5:p.Ala153Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.301G>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala153Ser
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

3-9793528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793528
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793528
    reference: chr 3
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.189C>T
  hgvsp: ENSP00000399810.1:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.153C>T
  hgvsp: ENSP00000390337.1:p.Arg52Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.460C>T
  hgvsp: ENSP00000305584.7:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.460C>T
  hgvsp: ENSP00000342851.7:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.304C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.392C>T
  hgvsp: ENSP00000393726.1:p.Arg132Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.460C>T
  hgvsp: ENSP00000305527.8:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.460C>T
  hgvsp: ENSP00000345520.5:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.460C>T
  hgvsp: ENSP00000403598.2:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1421C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.460C>T
  hgvsp: ENSP00000303132.6:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.460C>T
  hgvsp: ENSP00000306561.7:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.176C>T
  hgvsp: ENSP00000344899.5:p.Arg60Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.460C>T
  hgvsp: ENSP00000373337.5:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg154Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

3-9793529-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793529
    reference: chr 3
allele count: 45
allele frequency: 3.706388165914407e-4
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.305G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.461G>A
  hgvsp: ENSP00000403598.2:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.393G>A
  hgvsp: ENSP00000393726.1:p.Arg132His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.154G>A
  hgvsp: ENSP00000390337.1:p.Arg52His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.461G>A
  hgvsp: ENSP00000342851.7:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.461G>A
  hgvsp: ENSP00000306561.7:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.461G>A
  hgvsp: ENSP00000373337.5:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.461G>A
  hgvsp: ENSP00000305584.7:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.461G>A
  hgvsp: ENSP00000305527.8:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1422G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.461G>A
  hgvsp: ENSP00000303132.6:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.461G>A
  hgvsp: ENSP00000345520.5:p.Arg154His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.190G>A
  hgvsp: ENSP00000399810.1:p.Arg64His
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.177G>A
  hgvsp: ENSP00000344899.5:p.Arg60His
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
hgvs: p.Arg154His
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

3-9793529-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793529
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.461G>T
  hgvsp: ENSP00000342851.7:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.461G>T
  hgvsp: ENSP00000305527.8:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.461G>T
  hgvsp: ENSP00000303132.6:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.461G>T
  hgvsp: ENSP00000345520.5:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.190G>T
  hgvsp: ENSP00000399810.1:p.Arg64Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.461G>T
  hgvsp: ENSP00000306561.7:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.177G>T
  hgvsp: ENSP00000344899.5:p.Arg60Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1422G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.393G>T
  hgvsp: ENSP00000393726.1:p.Arg132Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.305G>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.461G>T
  hgvsp: ENSP00000403598.2:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.154G>T
  hgvsp: ENSP00000390337.1:p.Arg52Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.461G>T
  hgvsp: ENSP00000305584.7:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.461G>T
  hgvsp: ENSP00000373337.5:p.Arg154Leu
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg154Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

3-9793532-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793532
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793532
    reference: chr 3
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.193T>C
  hgvsp: ENSP00000399810.1:p.Ile65Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.464T>C
  hgvsp: ENSP00000303132.6:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.180T>C
  hgvsp: ENSP00000344899.5:p.Ile61Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.464T>C
  hgvsp: ENSP00000373337.5:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.464T>C
  hgvsp: ENSP00000345520.5:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.464T>C
  hgvsp: ENSP00000305527.8:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.464T>C
  hgvsp: ENSP00000306561.7:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.464T>C
  hgvsp: ENSP00000305584.7:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.308T>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.464T>C
  hgvsp: ENSP00000403598.2:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.464T>C
  hgvsp: ENSP00000342851.7:p.Ile155Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.396T>C
  hgvsp: ENSP00000393726.1:p.Ile133Thr
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1425T>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.157T>C
  hgvsp: ENSP00000390337.1:p.Ile53Thr
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile155Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

3-9793533-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793533
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793533
    reference: chr 3
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.465C>T
  hgvsp: ENST00000302036.7:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.465C>T
  hgvsp: ENST00000302008.8:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.465C>T
  hgvsp: ENST00000339511.5:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.465C>T
  hgvsp: ENST00000383826.5:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1426C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.309C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.181C>T
  hgvsp: ENST00000352937.5:c.181C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.194C>T
  hgvsp: ENST00000426518.1:c.194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.397C>T
  hgvsp: ENST00000429146.1:c.397C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.158C>T
  hgvsp: ENST00000441094.1:c.158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.465C>T
  hgvsp: ENST00000349503.5:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.465C>T
  hgvsp: ENST00000302003.7:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.465C>T
  hgvsp: ENST00000449570.2:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.465C>T
  hgvsp: ENST00000344629.7:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16677
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile155Ile
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

3-9793548-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793548
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793549
    reference: chr 3
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.325dupC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.481dupC
  hgvsp: ENSP00000345520.5:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.481dupC
  hgvsp: ENSP00000305527.8:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.197dupC
  hgvsp: ENSP00000344899.5:p.Arg67ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.210dupC
  hgvsp: ENSP00000399810.1:p.Arg71ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.481dupC
  hgvsp: ENSP00000342851.7:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.481dupC
  hgvsp: ENSP00000403598.2:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.413dupC
  hgvsp: ENSP00000393726.1:p.Arg139ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.481dupC
  hgvsp: ENSP00000303132.6:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.481dupC
  hgvsp: ENSP00000373337.5:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.481dupC
  hgvsp: ENSP00000306561.7:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.481dupC
  hgvsp: ENSP00000305584.7:p.Arg161ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1442dupC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.174dupC
  hgvsp: ENSP00000390337.1:p.Arg59ProfsTer14
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg161ProfsTer14
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

3-9793549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793549
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793549
    reference: chr 3
allele count: 16
allele frequency: 1.31784861214068e-4
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.413C>T
  hgvsp: ENSP00000393726.1:p.Arg139Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1442C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.481C>T
  hgvsp: ENSP00000342851.7:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.481C>T
  hgvsp: ENSP00000303132.6:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.197C>T
  hgvsp: ENSP00000344899.5:p.Arg67Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.481C>T
  hgvsp: ENSP00000373337.5:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.174C>T
  hgvsp: ENSP00000390337.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.481C>T
  hgvsp: ENSP00000306561.7:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.481C>T
  hgvsp: ENSP00000345520.5:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.481C>T
  hgvsp: ENSP00000305584.7:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.481C>T
  hgvsp: ENSP00000403598.2:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.481C>T
  hgvsp: ENSP00000305527.8:p.Arg161Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.210C>T
  hgvsp: ENSP00000399810.1:p.Arg71Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.325C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg161Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-9793550-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793550
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793550
    reference: chr 3
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.326G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.482G>A
  hgvsp: ENSP00000305584.7:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.211G>A
  hgvsp: ENSP00000399810.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.482G>A
  hgvsp: ENSP00000342851.7:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.482G>A
  hgvsp: ENSP00000305527.8:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.414G>A
  hgvsp: ENSP00000393726.1:p.Arg139Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.482G>A
  hgvsp: ENSP00000306561.7:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.482G>A
  hgvsp: ENSP00000303132.6:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.175G>A
  hgvsp: ENSP00000390337.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.482G>A
  hgvsp: ENSP00000403598.2:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1443G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.482G>A
  hgvsp: ENSP00000345520.5:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.198G>A
  hgvsp: ENSP00000344899.5:p.Arg67Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.482G>A
  hgvsp: ENSP00000373337.5:p.Arg161Gln
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg161Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

3-9793553-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793553
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793553
    reference: chr 3
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.201T>G
  hgvsp: ENSP00000344899.5:p.Leu68Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.485T>G
  hgvsp: ENSP00000306561.7:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.485T>G
  hgvsp: ENSP00000345520.5:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.178T>G
  hgvsp: ENSP00000390337.1:p.Leu60Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.485T>G
  hgvsp: ENSP00000305584.7:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1446T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.214T>G
  hgvsp: ENSP00000399810.1:p.Leu72Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.485T>G
  hgvsp: ENSP00000303132.6:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.485T>G
  hgvsp: ENSP00000305527.8:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.485T>G
  hgvsp: ENSP00000342851.7:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.329T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.485T>G
  hgvsp: ENSP00000403598.2:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.417T>G
  hgvsp: ENSP00000393726.1:p.Leu140Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.485T>G
  hgvsp: ENSP00000373337.5:p.Leu162Arg
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu162Arg
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

3-9793561-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793561
    reference: chr 3
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.425G>C
  hgvsp: ENSP00000393726.1:p.Ala143Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.493G>C
  hgvsp: ENSP00000303132.6:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.209G>C
  hgvsp: ENSP00000344899.5:p.Ala71Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.493G>C
  hgvsp: ENSP00000403598.2:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.493G>C
  hgvsp: ENSP00000345520.5:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.337G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.493G>C
  hgvsp: ENSP00000342851.7:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.493G>C
  hgvsp: ENSP00000373337.5:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.493G>C
  hgvsp: ENSP00000306561.7:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.222G>C
  hgvsp: ENSP00000399810.1:p.Ala75Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.493G>C
  hgvsp: ENSP00000305527.8:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1454G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.186G>C
  hgvsp: ENSP00000390337.1:p.Ala63Pro
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.493G>C
  hgvsp: ENSP00000305584.7:p.Ala165Pro
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16682
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala165Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-9793563-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793563
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793563
    reference: chr 3
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.188T>G
  hgvsp: ENST00000441094.1:c.188T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.495T>G
  hgvsp: ENST00000449570.2:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.495T>G
  hgvsp: ENST00000349503.5:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.495T>G
  hgvsp: ENST00000344629.7:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.495T>G
  hgvsp: ENST00000302008.8:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.495T>G
  hgvsp: ENST00000339511.5:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1456T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.224T>G
  hgvsp: ENST00000426518.1:c.224T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.427T>G
  hgvsp: ENST00000429146.1:c.427T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.495T>G
  hgvsp: ENST00000302036.7:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.211T>G
  hgvsp: ENST00000352937.5:c.211T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.495T>G
  hgvsp: ENST00000383826.5:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.495T>G
  hgvsp: ENST00000302003.7:c.495T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.339T>G
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala165Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

3-9793566-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793566
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793565
    reference: chr 3
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.500delG
  hgvsp: ENSP00000303132.6:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.500delG
  hgvsp: ENSP00000342851.7:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.500delG
  hgvsp: ENSP00000306561.7:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.216delG
  hgvsp: ENSP00000344899.5:p.Gly73AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.229delG
  hgvsp: ENSP00000399810.1:p.Gly77AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1461delG
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.500delG
  hgvsp: ENSP00000305584.7:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.432delG
  hgvsp: ENSP00000393726.1:p.Gly145AspfsTer98
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.500delG
  hgvsp: ENSP00000345520.5:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.500delG
  hgvsp: ENSP00000373337.5:p.Gly167AspfsTer?
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.500delG
  hgvsp: ENSP00000403598.2:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.500delG
  hgvsp: ENSP00000305527.8:p.Gly167AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.193delG
  hgvsp: ENSP00000390337.1:p.Gly65AspfsTer42
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.344delG
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly167AspfsTer42
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: TG
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

3-9793572-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793572
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793572
    reference: chr 3
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.348T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.504T>G
  hgvsp: ENST00000339511.5:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.220T>G
  hgvsp: ENST00000352937.5:c.220T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.504T>G
  hgvsp: ENST00000349503.5:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.233T>G
  hgvsp: ENST00000426518.1:c.233T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.504T>G
  hgvsp: ENST00000449570.2:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.504T>G
  hgvsp: ENST00000302036.7:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.197T>G
  hgvsp: ENST00000441094.1:c.197T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.504T>G
  hgvsp: ENST00000344629.7:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.436T>G
  hgvsp: ENST00000429146.1:c.436T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.504T>G
  hgvsp: ENST00000383826.5:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1465T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.504T>G
  hgvsp: ENST00000302008.8:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.504T>G
  hgvsp: ENST00000302003.7:c.504T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro168Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

3-9793573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793573
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793573
    reference: chr 3
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.505C>T
  hgvsp: ENSP00000306561.7:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.349C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.437C>T
  hgvsp: ENSP00000393726.1:p.Arg147Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.505C>T
  hgvsp: ENSP00000345520.5:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.505C>T
  hgvsp: ENSP00000373337.5:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.505C>T
  hgvsp: ENSP00000305584.7:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.505C>T
  hgvsp: ENSP00000403598.2:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.505C>T
  hgvsp: ENSP00000303132.6:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.198C>T
  hgvsp: ENSP00000390337.1:p.Arg67Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.221C>T
  hgvsp: ENSP00000344899.5:p.Arg75Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.505C>T
  hgvsp: ENSP00000305527.8:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.234C>T
  hgvsp: ENSP00000399810.1:p.Arg79Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.505C>T
  hgvsp: ENSP00000342851.7:p.Arg169Trp
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1466C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg169Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

3-9793574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793574
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793574
    reference: chr 3
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.506G>A
  hgvsp: ENSP00000303132.6:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.506G>A
  hgvsp: ENSP00000305527.8:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.506G>A
  hgvsp: ENSP00000342851.7:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.506G>A
  hgvsp: ENSP00000403598.2:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.506G>A
  hgvsp: ENSP00000306561.7:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.506G>A
  hgvsp: ENSP00000345520.5:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.506G>A
  hgvsp: ENSP00000305584.7:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.438G>A
  hgvsp: ENSP00000393726.1:p.Arg147Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.350G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.235G>A
  hgvsp: ENSP00000399810.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1467G>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.199G>A
  hgvsp: ENSP00000390337.1:p.Arg67Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.506G>A
  hgvsp: ENSP00000373337.5:p.Arg169Gln
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.222G>A
  hgvsp: ENSP00000344899.5:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg169Gln
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-9793581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793581
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793581
    reference: chr 3
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1474C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.513C>T
  hgvsp: ENST00000302008.8:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.513C>T
  hgvsp: ENST00000383826.5:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.513C>T
  hgvsp: ENST00000339511.5:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.513C>T
  hgvsp: ENST00000349503.5:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.229C>T
  hgvsp: ENST00000352937.5:c.229C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.513C>T
  hgvsp: ENST00000302036.7:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.242C>T
  hgvsp: ENST00000426518.1:c.242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.513C>T
  hgvsp: ENST00000449570.2:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.513C>T
  hgvsp: ENST00000302003.7:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.445C>T
  hgvsp: ENST00000429146.1:c.445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.357C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.513C>T
  hgvsp: ENST00000344629.7:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.206C>T
  hgvsp: ENST00000441094.1:c.206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile171Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

3-9793590-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793590
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793590
    reference: chr 3
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.522T>G
  hgvsp: ENSP00000403598.2:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.522T>G
  hgvsp: ENSP00000306561.7:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.4T>G
  hgvsp: ENSP00000402713.1:p.Met2Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.522T>G
  hgvsp: ENSP00000342851.7:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.522T>G
  hgvsp: ENSP00000345520.5:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.215T>G
  hgvsp: ENSP00000390337.1:p.Asp72Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.251T>G
  hgvsp: ENSP00000399810.1:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.522T>G
  hgvsp: ENSP00000305527.8:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.4T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.522T>G
  hgvsp: ENSP00000303132.6:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.522T>G
  hgvsp: ENSP00000305584.7:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.454T>G
  hgvsp: ENSP00000393726.1:p.Asp152Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1483T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.366T>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.238T>G
  hgvsp: ENSP00000344899.5:p.Asp80Glu
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.522T>G
  hgvsp: ENSP00000373337.5:p.Asp174Glu
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp174Glu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

3-9793597-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793597
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793597
    reference: chr 3
allele count: 15
allele frequency: 1.235910618944038e-4
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.245A>T
  hgvsp: ENSP00000344899.5:p.Thr83Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.222A>T
  hgvsp: ENSP00000390337.1:p.Thr75Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.529A>T
  hgvsp: ENSP00000373337.5:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.529A>T
  hgvsp: ENSP00000403598.2:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.11A>T
  hgvsp: ENST00000416333.1:c.11A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1490A>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.529A>T
  hgvsp: ENSP00000305527.8:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.529A>T
  hgvsp: ENSP00000306561.7:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.529A>T
  hgvsp: ENSP00000303132.6:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.461A>T
  hgvsp: ENSP00000393726.1:p.Thr155Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.529A>T
  hgvsp: ENSP00000342851.7:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.529A>T
  hgvsp: ENSP00000345520.5:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.11A>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.373A>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.258A>T
  hgvsp: ENSP00000399810.1:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.529A>T
  hgvsp: ENSP00000305584.7:p.Thr177Ser
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr177Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-9793598-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793598
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793598
    reference: chr 3
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.374C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.530C>T
  hgvsp: ENSP00000306561.7:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.530C>T
  hgvsp: ENSP00000342851.7:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.530C>T
  hgvsp: ENSP00000303132.6:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.530C>T
  hgvsp: ENSP00000403598.2:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.530C>T
  hgvsp: ENSP00000373337.5:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.12C>T
  hgvsp: ENSP00000402713.1:p.Pro5Ser
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.259C>T
  hgvsp: ENSP00000399810.1:p.Thr87Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.223C>T
  hgvsp: ENSP00000390337.1:p.Thr75Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.462C>T
  hgvsp: ENSP00000393726.1:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1491C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.530C>T
  hgvsp: ENSP00000305584.7:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.530C>T
  hgvsp: ENSP00000305527.8:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.246C>T
  hgvsp: ENSP00000344899.5:p.Thr83Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.530C>T
  hgvsp: ENSP00000345520.5:p.Thr177Ile
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.12C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr177Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-9793601-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793601
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793601
    reference: chr 3
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.226A>G
  hgvsp: ENSP00000390337.1:p.Tyr76Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.533A>G
  hgvsp: ENSP00000342851.7:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.465A>G
  hgvsp: ENSP00000393726.1:p.Tyr156Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.533A>G
  hgvsp: ENSP00000403598.2:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.533A>G
  hgvsp: ENSP00000305584.7:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1494A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.262A>G
  hgvsp: ENSP00000399810.1:p.Tyr88Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.533A>G
  hgvsp: ENSP00000303132.6:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.533A>G
  hgvsp: ENSP00000345520.5:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.533A>G
  hgvsp: ENSP00000306561.7:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.15A>G
  hgvsp: ENSP00000402713.1:p.Thr6Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.533A>G
  hgvsp: ENSP00000305527.8:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.15A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.377A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.533A>G
  hgvsp: ENSP00000373337.5:p.Tyr178Cys
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.249A>G
  hgvsp: ENSP00000344899.5:p.Tyr84Cys
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr178Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP

3-9793604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793604
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793604
    reference: chr 3
allele count: 3
allele frequency: 2.471984179301253e-5
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.536A>G
  hgvsp: ENSP00000305527.8:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.536A>G
  hgvsp: ENSP00000303132.6:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1497A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.536A>G
  hgvsp: ENSP00000345520.5:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.536A>G
  hgvsp: ENSP00000373337.5:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.468A>G
  hgvsp: ENSP00000393726.1:p.His157Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.536A>G
  hgvsp: ENSP00000305584.7:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.252A>G
  hgvsp: ENSP00000344899.5:p.His85Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.265A>G
  hgvsp: ENSP00000399810.1:p.His89Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.18A>G
  hgvsp: ENSP00000402713.1:p.Met7Val
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.536A>G
  hgvsp: ENSP00000403598.2:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.18A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.380A>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.536A>G
  hgvsp: ENSP00000342851.7:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.536A>G
  hgvsp: ENSP00000306561.7:p.His179Arg
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.229A>G
  hgvsp: ENSP00000390337.1:p.His77Arg
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His179Arg
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

3-9793621-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793621
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793621
    reference: chr 3
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.35C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.553C>T
  hgvsp: ENSP00000305584.7:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.553C>T
  hgvsp: ENSP00000342851.7:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.553C>T
  hgvsp: ENSP00000305527.8:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.553C>T
  hgvsp: ENSP00000306561.7:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.246C>T
  hgvsp: ENSP00000390337.1:p.Gln83Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.553C>T
  hgvsp: ENSP00000403598.2:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.485C>T
  hgvsp: ENSP00000393726.1:p.Gln163Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.553C>T
  hgvsp: ENSP00000345520.5:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.282C>T
  hgvsp: ENSP00000399810.1:p.Gln95Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.35C>T
  hgvsp: ENST00000416333.1:c.35C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.553C>T
  hgvsp: ENSP00000303132.6:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.553C>T
  hgvsp: ENSP00000373337.5:p.Gln185Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.269C>T
  hgvsp: ENSP00000344899.5:p.Gln91Ter
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.397C>T
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1514C>T
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln185Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

3-9793624-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793624
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793623
    reference: chr 3
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.275delC
  hgvsp: ENSP00000344899.5:p.Leu93TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.491delC
  hgvsp: ENSP00000393726.1:p.Leu165TrpfsTer78
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.252delC
  hgvsp: ENSP00000390337.1:p.Leu85TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.41delC
  hgvsp: ENSP00000402713.1:p.Trp15GlyfsTer9
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.41delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.559delC
  hgvsp: ENSP00000345520.5:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.559delC
  hgvsp: ENSP00000342851.7:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.559delC
  hgvsp: ENSP00000306561.7:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1520delC
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.559delC
  hgvsp: ENSP00000403598.2:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.559delC
  hgvsp: ENSP00000373337.5:p.Leu187TrpfsTer?
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.559delC
  hgvsp: ENSP00000305527.8:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.559delC
  hgvsp: ENSP00000303132.6:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.288delC
  hgvsp: ENSP00000399810.1:p.Leu97TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.559delC
  hgvsp: ENSP00000305584.7:p.Leu187TrpfsTer22
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.403delC
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu187TrpfsTer22
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: GC
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-9793625-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793625
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793625
    reference: chr 3
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.250C>G
  hgvsp: ENSP00000390337.1:p.Ala84Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.39C>G
  hgvsp: ENSP00000402713.1:p.Pro14Ala
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.557C>G
  hgvsp: ENSP00000305527.8:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.286C>G
  hgvsp: ENSP00000399810.1:p.Ala96Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.557C>G
  hgvsp: ENSP00000342851.7:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.401C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.557C>G
  hgvsp: ENSP00000303132.6:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.273C>G
  hgvsp: ENSP00000344899.5:p.Ala92Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.489C>G
  hgvsp: ENSP00000393726.1:p.Ala164Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.39C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.557C>G
  hgvsp: ENSP00000306561.7:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.557C>G
  hgvsp: ENSP00000345520.5:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1518C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.557C>G
  hgvsp: ENSP00000373337.5:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.557C>G
  hgvsp: ENSP00000305584.7:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.557C>G
  hgvsp: ENSP00000403598.2:p.Ala186Gly
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala186Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

3-9793635-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793635
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793635
    reference: chr 3
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.47+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.411T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.497+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.294+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.565+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.258+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.47+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.281+2T>A
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1528T>A
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.565+2T>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

3-9793638-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793638
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793638
    reference: chr 3
allele count: 2
allele frequency: 1.652865241896828e-5
allele num: 121002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.281+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.47+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.294+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1531G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.414G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.497+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.565+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.258+5G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.47+5G>C
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.565+5G>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

3-9793639-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793639
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793638
    reference: chr 3
allele count: 2
allele frequency: 1.653001851362074e-5
allele num: 120992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.294+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.47+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.258+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.416delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.497+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.281+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.47+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.565+7delA
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1533delA
  variant of: http://identifiers.org/hgnc/8125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.565+7delA
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: TA
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

3-9793642-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793642
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793642
    reference: chr 3
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.258+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.47+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.497+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.418G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.281+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1535G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.565+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.294+9G>C
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.47+9G>C
  variant of: http://identifiers.org/hgnc/8125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum

3-9793651-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9793651
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9793651
    reference: chr 3
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000399810
  ensembl transcript: ENST00000426518
  gene symbol: OGG1
  hgvsc: ENST00000426518.1:c.294+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000402713
  ensembl transcript: ENST00000416333
  gene symbol: OGG1
  hgvsc: ENST00000416333.1:c.47+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305584
  ensembl transcript: ENST00000302003
  gene symbol: OGG1
  hgvsc: ENST00000302003.7:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000342851
  ensembl transcript: ENST00000344629
  gene symbol: OGG1
  hgvsc: ENST00000344629.7:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000432857
  gene symbol: OGG1
  hgvsc: ENST00000432857.2:n.427C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl transcript: ENST00000383825
  gene symbol: OGG1
  hgvsc: ENST00000383825.2:n.47+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000393726
  ensembl transcript: ENST00000429146
  gene symbol: OGG1
  hgvsc: ENST00000429146.1:c.497+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000390337
  ensembl transcript: ENST00000441094
  gene symbol: OGG1
  hgvsc: ENST00000441094.1:c.258+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000345520
  ensembl transcript: ENST00000339511
  gene symbol: OGG1
  hgvsc: ENST00000339511.5:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000403598
  ensembl transcript: ENST00000449570
  gene symbol: OGG1
  hgvsc: ENST00000449570.2:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000396034
  ensembl transcript: ENST00000425665
  gene symbol: OGG1
  hgvsc: ENST00000425665.1:c.137+1544C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000306561
  ensembl transcript: ENST00000302036
  gene symbol: OGG1
  hgvsc: ENST00000302036.7:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000344899
  ensembl transcript: ENST00000352937
  gene symbol: OGG1
  hgvsc: ENST00000352937.5:c.281+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000303132
  ensembl transcript: ENST00000349503
  gene symbol: OGG1
  hgvsc: ENST00000349503.5:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000305527
  ensembl transcript: ENST00000302008
  gene symbol: OGG1
  hgvsc: ENST00000302008.8:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114026
  ensembl protein: ENSP00000373337
  ensembl transcript: ENST00000383826
  gene symbol: OGG1
  hgvsc: ENST00000383826.5:c.565+18C>G
  variant of: http://identifiers.org/hgnc/8125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3885
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 806
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 554
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21727
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 475
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4532
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6202
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.015e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.07e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.780943e6

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-1

FS
type: SiteQuality
SIO_000300: 1.0838e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.178e0

GenotypeDepth
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 582
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6201
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

FS
type: SiteQuality
SIO_000300: 5.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.933e0

DP
type: SiteQuality
SIO_000300: 1.781117e6

QD
type: SiteQuality
SIO_000300: 1.388e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

GenotypeDepth
all individuals: 808
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 633
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 554
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 481
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26382
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 582
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508022680661117e-5
allele num: 66312
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.19e1

FS
type: SiteQuality
SIO_000300: 3.844e0

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 1.779636e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 481
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 475
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21684
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1303
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44089
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518925815663163e-5
allele num: 65836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15946
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.246e1

FS
type: SiteQuality
SIO_000300: 4.453e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -4.98e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 1.763494e6

GenotypeDepth
all individuals: 1707
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 797
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 480
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 620
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534354190321294e-5
allele num: 65174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Other
type: Population
allele count: 0
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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South Asian
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European (Finnish)
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Other
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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Other
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European (Finnish)
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DP
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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East Asian
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Other
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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MQ
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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African
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East Asian
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FS
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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QD
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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African
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East Asian
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European (Finnish)
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DP
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VQSLOD
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FS
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 1.319957761351637e-4
allele num: 7576
num of homozygotes: 0

Latino
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South Asian
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allele frequency: 1.380643379814994e-4
allele num: 14486
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European (Finnish)
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allele frequency: 3.519887363604365e-4
allele num: 5682
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European (Non-Finnish)
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allele frequency: 7.02543206407194e-5
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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QD
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 7.034327518289252e-5
allele num: 14216
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.926708026665639e-5
allele num: 51902
num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

African
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Latino
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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South Asian
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MQ
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DP
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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Other
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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South Asian
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QD
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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Latino
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South Asian
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East Asian
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ClippingRankSum
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MQRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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Latino
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East Asian
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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QD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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African
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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FS
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GenotypeDepth
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GenotypeQuality
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Latino
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European (Finnish)
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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African
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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MQRankSum
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FS
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MQ
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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East Asian
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European (Finnish)
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South Asian
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Latino
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FS
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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ClippingRankSum
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African
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQ
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QD
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South Asian
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MQ
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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QD
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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Other
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East Asian
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African
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European (Non-Finnish)
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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DP
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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South Asian
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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African
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VQSLOD
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FS
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QD
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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African
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East Asian
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European (Non-Finnish)
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MQ
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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FS
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InbreedingCoeff
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African
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European (Non-Finnish)
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South Asian
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FS
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DP
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SIO_000300: 2.073534e6

ClippingRankSum
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SIO_000300: -1.576e0

MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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European (Finnish)
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East Asian
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Latino
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.947857356907402e-4
allele num: 66740
num of homozygotes: 0

Latino
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Other
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European (Finnish)
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FS
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SIO_000300: 5.570000000000001e-1

DP
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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QD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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QD
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FS
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Latino
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DP
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.39736290080911e-4
allele num: 66740
num of homozygotes: 0

South Asian
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African
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East Asian
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Other
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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FS
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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Latino
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European (Non-Finnish)
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African
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East Asian
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Latino
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Other
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European (Finnish)
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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Other
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FS
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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MQ
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FS
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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MQRankSum
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Latino
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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Latino
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African
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South Asian
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FS
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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DP
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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Latino
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East Asian
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South Asian
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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African
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Latino
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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QD
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European (Finnish)
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African
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East Asian
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Latino
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DP
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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SIO_000300: 6.56e-1

MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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SIO_000300: 1.631e1

DP
type: SiteQuality
SIO_000300: 2.059236e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.925669170036588e-4
allele num: 10386
num of homozygotes: 0

South Asian
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allele count: 0
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Other
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

DP
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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BaseQRankSum
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SIO_000300: 1.29e0

InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
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SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 1.031e0

QD
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SIO_000300: 1.617e1

ReadPosRankSum
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SIO_000300: 1.51e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.00336376741951e-5
allele num: 66592
num of homozygotes: 0

ClippingRankSum
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SIO_000300: -1.533e0

QD
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InbreedingCoeff
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SIO_000300: -2.0e-4

DP
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.934e1

ReadPosRankSum
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SIO_000300: 3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.003634397621121e-5
allele num: 66586
num of homozygotes: 0

South Asian
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African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
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SIO_000300: 6.7e-2

FS
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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