2-33442730-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442730
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442730
    reference: chr 2
allele count: 1
allele frequency: 9.328706295011009e-6
allele num: 107196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+9T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+9T>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28540
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15730
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-33442735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442735
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442735
    reference: chr 2
allele count: 1
allele frequency: 9.539436028541992e-6
allele num: 104828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+14C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+14C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12898
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24721
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 279
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1998
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-33442736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442736
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442736
    reference: chr 2
allele count: 1
allele frequency: 9.597297401051864e-6
allele num: 104196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+15C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+15C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

2-33442739-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442739
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442739
    reference: chr 2
allele count: 1
allele frequency: 9.810846872302017e-6
allele num: 101928
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+18A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS

2-33442740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442740
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442740
    reference: chr 2
allele count: 1
allele frequency: 9.8173964264677e-6
allele num: 101860
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+19C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+19C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19893
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

2-33442759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442759
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442759
    reference: chr 2
allele count: 1
allele frequency: 1.127497406755964e-5
allele num: 88692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+38A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+38A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21442
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

2-33442760-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442760
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442760
    reference: chr 2
allele count: 1
allele frequency: 1.142334932602239e-5
allele num: 87540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+39G>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4564
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6534
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4694
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

2-33442761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442761
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442761
    reference: chr 2
allele count: 1
allele frequency: 1.15807759119861e-5
allele num: 86350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+40C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+40C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20738
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6090
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5858
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

2-33442762-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442762
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442762
    reference: chr 2
allele count: 6
allele frequency: 6.993659082431928e-5
allele num: 85792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+41A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+41A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20373
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4927
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5934
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

2-33442764-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442764
    reference: chr 2
allele count: 1
allele frequency: 1.194543326086437e-5
allele num: 83714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+43A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+43A>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5999
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

2-33442768-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442768
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442768
    reference: chr 2
allele count: 1
allele frequency: 1.265278234683807e-5
allele num: 79034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+47G>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+47G>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17806
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3786
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

2-33442768-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33442768
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33442769
    reference: chr 2
allele count: 2
allele frequency: 2.530556469367614e-5
allele num: 79034
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.826+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.826+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1804+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.826+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.826+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1804+53dupT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.826+53dupT
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8085
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5449
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

2-33447096-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447096
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447096
    reference: chr 2
allele count: 2
allele frequency: 1.666861133798943e-5
allele num: 119986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-51T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-51T>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4828
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9162
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

2-33447099-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447099
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447099
    reference: chr 2
allele count: 1
allele frequency: 8.331666999933347e-6
allele num: 120024
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-48A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-48A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

2-33447103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447103
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447103
    reference: chr 2
allele count: 2
allele frequency: 1.665112561609165e-5
allele num: 120112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-44T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-44T>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13793
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4245
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

2-33447109-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447109
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447109
    reference: chr 2
allele count: 2
allele frequency: 1.665029387768694e-5
allele num: 120118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-38G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-38G>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

2-33447115-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447115
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447115
    reference: chr 2
allele count: 2
allele frequency: 1.663174001264012e-5
allele num: 120252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-32A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-32A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4403
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6875
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4982
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-33447125-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447125
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447125
    reference: chr 2
allele count: 1
allele frequency: 8.294487483618387e-6
allele num: 120562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-22C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-22C>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/2-33447128-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447128
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447128
    reference: chr 2
allele count: 10
allele frequency: 8.288162845823595e-5
allele num: 120654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-19A>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-19A>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-33447129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447129
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447129
    reference: chr 2
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-18G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-18G>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13886
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

2-33447130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447130
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447130
    reference: chr 2
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-17C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-17C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

2-33447139-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447139
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447139
    reference: chr 2
allele count: 2
allele frequency: 1.653739932858159e-5
allele num: 120938
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-8C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-8C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10571
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1805-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

2-33447140-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447140
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447140
    reference: chr 2
allele count: 1
allele frequency: 8.265965712774223e-6
allele num: 120978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.827-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.827-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.827-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1805-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1805-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.827-7C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.827-7C>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13919
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1805-7C>G
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

2-33447153-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447153
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447153
    reference: chr 2
allele count: 4
allele frequency: 3.30234631705827e-5
allele num: 121126
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1811A>G
  hgvsp: ENSP00000346467.3:p.His604Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.833A>G
  hgvsp: ENSP00000393057.2:p.His278Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.833A>G
  hgvsp: ENSP00000384091.1:p.His278Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.833A>G
  hgvsp: ENSP00000374653.4:p.His278Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.833A>G
  hgvsp: ENSP00000385359.1:p.His278Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.833A>G
  hgvsp: ENSP00000384373.1:p.His278Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1811A>G
  hgvsp: ENSP00000386043.2:p.His604Arg
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20567
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His604Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

2-33447160-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447160
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447160
    reference: chr 2
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1818C>T
  hgvsp: ENST00000354476.3:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.840C>T
  hgvsp: ENST00000404525.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.840C>T
  hgvsp: ENST00000418533.2:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1818C>T
  hgvsp: ENST00000404816.2:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.840C>T
  hgvsp: ENST00000402934.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.840C>T
  hgvsp: ENST00000407925.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.840C>T
  hgvsp: ENST00000390003.4:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr606Tyr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

2-33447167-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447167
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447167
    reference: chr 2
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.847A>G
  hgvsp: ENSP00000384091.1:p.Met283Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1825A>G
  hgvsp: ENSP00000386043.2:p.Met609Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1825A>G
  hgvsp: ENSP00000346467.3:p.Met609Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.847A>G
  hgvsp: ENSP00000374653.4:p.Met283Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.847A>G
  hgvsp: ENSP00000384373.1:p.Met283Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.847A>G
  hgvsp: ENSP00000385359.1:p.Met283Val
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.847A>G
  hgvsp: ENSP00000393057.2:p.Met283Val
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4606
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7275
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met609Val
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

2-33447178-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447178
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447178
    reference: chr 2
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1836C>T
  hgvsp: ENST00000354476.3:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.858C>T
  hgvsp: ENST00000402934.1:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.858C>T
  hgvsp: ENST00000407925.1:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.858C>T
  hgvsp: ENST00000390003.4:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.858C>T
  hgvsp: ENST00000418533.2:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1836C>T
  hgvsp: ENST00000404816.2:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.858C>T
  hgvsp: ENST00000404525.1:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys612Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

2-33447183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447183
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447183
    reference: chr 2
allele count: 2
allele frequency: 1.649811096629436e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.863C>T
  hgvsp: ENSP00000393057.2:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.863C>T
  hgvsp: ENSP00000384091.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.863C>T
  hgvsp: ENSP00000384373.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.863C>T
  hgvsp: ENSP00000385359.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1841C>T
  hgvsp: ENSP00000386043.2:p.Pro614Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.863C>T
  hgvsp: ENSP00000374653.4:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1841C>T
  hgvsp: ENSP00000346467.3:p.Pro614Leu
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7273
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13985
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro614Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

2-33447184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447184
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447184
    reference: chr 2
allele count: 7
allele frequency: 5.774624649397789e-5
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.864G>A
  hgvsp: ENST00000402934.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.864G>A
  hgvsp: ENST00000407925.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1842G>A
  hgvsp: ENST00000404816.2:c.1842G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.864G>A
  hgvsp: ENST00000418533.2:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1842G>A
  hgvsp: ENST00000354476.3:c.1842G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.864G>A
  hgvsp: ENST00000404525.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.864G>A
  hgvsp: ENST00000390003.4:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14001
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20479
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro614Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-33447194-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447194
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447194
    reference: chr 2
allele count: 5
allele frequency: 4.123983438082513e-5
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.874C>T
  hgvsp: ENSP00000385359.1:p.Arg292Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.874C>T
  hgvsp: ENSP00000384091.1:p.Arg292Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.874C>T
  hgvsp: ENSP00000384373.1:p.Arg292Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1852C>T
  hgvsp: ENSP00000346467.3:p.Arg618Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.874C>T
  hgvsp: ENSP00000393057.2:p.Arg292Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.874C>T
  hgvsp: ENSP00000374653.4:p.Arg292Trp
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1852C>T
  hgvsp: ENSP00000386043.2:p.Arg618Trp
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20396
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg618Trp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

2-33447195-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447195
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447195
    reference: chr 2
allele count: 3
allele frequency: 2.474308430793593e-5
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1853G>A
  hgvsp: ENSP00000386043.2:p.Arg618Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.875G>A
  hgvsp: ENSP00000385359.1:p.Arg292Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.875G>A
  hgvsp: ENSP00000384091.1:p.Arg292Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1853G>A
  hgvsp: ENSP00000346467.3:p.Arg618Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.875G>A
  hgvsp: ENSP00000393057.2:p.Arg292Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.875G>A
  hgvsp: ENSP00000384373.1:p.Arg292Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.875G>A
  hgvsp: ENSP00000374653.4:p.Arg292Gln
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg618Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-33447197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447197
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447197
    reference: chr 2
allele count: 32
allele frequency: 2.639305862558147e-4
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1855G>A
  hgvsp: ENSP00000346467.3:p.Val619Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.877G>A
  hgvsp: ENSP00000384373.1:p.Val293Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.877G>A
  hgvsp: ENSP00000374653.4:p.Val293Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.877G>A
  hgvsp: ENSP00000384091.1:p.Val293Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1855G>A
  hgvsp: ENSP00000386043.2:p.Val619Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.877G>A
  hgvsp: ENSP00000385359.1:p.Val293Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.877G>A
  hgvsp: ENSP00000393057.2:p.Val293Ile
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val619Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-33447201-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447201
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447201
    reference: chr 2
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1859A>G
  hgvsp: ENSP00000386043.2:p.Asn620Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.881A>G
  hgvsp: ENSP00000384373.1:p.Asn294Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1859A>G
  hgvsp: ENSP00000346467.3:p.Asn620Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.881A>G
  hgvsp: ENSP00000393057.2:p.Asn294Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.881A>G
  hgvsp: ENSP00000385359.1:p.Asn294Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.881A>G
  hgvsp: ENSP00000374653.4:p.Asn294Ser
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.881A>G
  hgvsp: ENSP00000384091.1:p.Asn294Ser
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn620Ser
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

2-33447202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447202
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447202
    reference: chr 2
allele count: 52257
allele frequency: 4.312274100113878e-1
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1860C>T
  hgvsp: ENST00000354476.3:c.1860C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.882C>T
  hgvsp: ENST00000390003.4:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.882C>T
  hgvsp: ENST00000407925.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.882C>T
  hgvsp: ENST00000404525.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1860C>T
  hgvsp: ENST00000404816.2:c.1860C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.882C>T
  hgvsp: ENST00000402934.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.882C>T
  hgvsp: ENST00000418533.2:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 4.75e1
  variant carriers: 2343
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 7.25e1
  variant carriers: 2966
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 2.75e1
  variant carriers: 557
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 9.75e1
  variant carriers: 9330
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.25e1
  variant carriers: 966
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 5.75e1
  variant carriers: 2902
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 5.25e1
  variant carriers: 2728
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.25e1
  variant carriers: 1595
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 4.25e1
  variant carriers: 1912
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 8.25e1
  variant carriers: 2372
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 6.75e1
  variant carriers: 3135
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 6.25e1
  variant carriers: 3183
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 2.25e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 8.75e1
  variant carriers: 1893
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 3.75e1
  variant carriers: 1515
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 7.75e1
  variant carriers: 2683
genotype quality: GenotypeQuality
  all individuals: 8529
  bin: 6.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 7.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 9.25e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 37
hgvs: p.Asn620Asn
num of homozygotes: 11832
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-33447204-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447204
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447204
    reference: chr 2
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.884A>C
  hgvsp: ENSP00000393057.2:p.Asn295Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1862A>C
  hgvsp: ENSP00000346467.3:p.Asn621Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.884A>C
  hgvsp: ENSP00000374653.4:p.Asn295Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.884A>C
  hgvsp: ENSP00000384373.1:p.Asn295Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.884A>C
  hgvsp: ENSP00000385359.1:p.Asn295Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1862A>C
  hgvsp: ENSP00000386043.2:p.Asn621Thr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.884A>C
  hgvsp: ENSP00000384091.1:p.Asn295Thr
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn621Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

2-33447208-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447208
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447208
    reference: chr 2
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.888C>G
  hgvsp: ENST00000404525.1:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.888C>G
  hgvsp: ENST00000418533.2:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1866C>G
  hgvsp: ENST00000354476.3:c.1866C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.888C>G
  hgvsp: ENST00000402934.1:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.888C>G
  hgvsp: ENST00000407925.1:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.888C>G
  hgvsp: ENST00000390003.4:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1866C>G
  hgvsp: ENST00000404816.2:c.1866C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10419
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr622Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-33447214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447214
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447214
    reference: chr 2
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.894C>T
  hgvsp: ENST00000407925.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1872C>T
  hgvsp: ENST00000404816.2:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.894C>T
  hgvsp: ENST00000418533.2:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.894C>T
  hgvsp: ENST00000390003.4:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.894C>T
  hgvsp: ENST00000404525.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.894C>T
  hgvsp: ENST00000402934.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1872C>T
  hgvsp: ENST00000354476.3:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26582
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10409
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys624Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

2-33447216-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447216
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447216
    reference: chr 2
allele count: 1
allele frequency: 8.262823902696986e-6
allele num: 121024
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.896A>G
  hgvsp: ENSP00000385359.1:p.Gln299Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1874A>G
  hgvsp: ENSP00000346467.3:p.Gln625Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.896A>G
  hgvsp: ENSP00000384091.1:p.Gln299Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.896A>G
  hgvsp: ENSP00000384373.1:p.Gln299Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.896A>G
  hgvsp: ENSP00000393057.2:p.Gln299Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1874A>G
  hgvsp: ENSP00000386043.2:p.Gln625Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.896A>G
  hgvsp: ENSP00000374653.4:p.Gln299Arg
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln625Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

2-33447238-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447238
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447238
    reference: chr 2
allele count: 1104
allele frequency: 9.144068779299949e-3
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.898+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1876+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.898+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1876+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.898+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.898+20T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.898+20T>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 19795
  bin: 2.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 3.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 13216
  bin: 3.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 8768
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 4.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 4.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 9.75e1
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 8205
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4278
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25191
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3097
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 47
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

2-33447241-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447241
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447241
    reference: chr 2
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1876+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.898+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.898+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1876+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.898+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.898+23A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.898+23A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-33447248-C-CTCAACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447248
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447254
    reference: chr 2
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: CTCAACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.898+31_898+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1876+31_1876+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.898+31_898+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.898+31_898+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.898+31_898+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1876+31_1876+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.898+31_898+36dupTCAACA
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12832
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8028
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7907
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-33447258-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33447258
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33447257
    reference: chr 2
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.898+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.898+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.898+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.898+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.898+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1876+44delT
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1876+44delT
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10206
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: GT
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

2-33468679-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468679
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468679
    reference: chr 2
allele count: 2
allele frequency: 1.65404082172748e-5
allele num: 120916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-50T>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-50T>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30990
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

2-33468685-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468685
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468685
    reference: chr 2
allele count: 2
allele frequency: 1.653466492501529e-5
allele num: 120958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-44A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-44A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

2-33468689-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468689
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468689
    reference: chr 2
allele count: 3
allele frequency: 2.48003571251426e-5
allele num: 120966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-40G>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30990
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3889
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

2-33468690-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468690
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468690
    reference: chr 2
allele count: 5
allele frequency: 4.133051183705859e-5
allele num: 120976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-39G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-39G>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30989
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

2-33468698-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468698
    reference: chr 2
allele count: 1
allele frequency: 8.263370132874991e-6
allele num: 121016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-31G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-31G>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3828
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 154
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

2-33468699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468699
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468699
    reference: chr 2
allele count: 2
allele frequency: 1.652674026574998e-5
allele num: 121016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-30C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-30C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 2367
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genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 202
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8383
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2245
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

2-33468701-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468701
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468701
    reference: chr 2
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-28C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-28C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 244
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

2-33468702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468702
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468702
    reference: chr 2
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-27C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-27C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3928
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3832
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31007
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-33468706-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468706
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468706
    reference: chr 2
allele count: 2
allele frequency: 1.651418568550385e-5
allele num: 121108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-23T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-23T>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9228
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31008
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

2-33468711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468711
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468711
    reference: chr 2
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-18A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-18A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

2-33468712-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468712
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468712
    reference: chr 2
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-17A>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-17A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

2-33468714-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468714
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468714
    reference: chr 2
allele count: 3
allele frequency: 2.475492623031983e-5
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-15T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-15T>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31010
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

2-33468716-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468716
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468716
    reference: chr 2
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-13T>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-13T>C
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

2-33468717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468717
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468717
    reference: chr 2
allele count: 2
allele frequency: 1.649838315845047e-5
allele num: 121224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-12G>A
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-12G>A
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9187
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

2-33468723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468723
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468723
    reference: chr 2
allele count: 18
allele frequency: 1.48451159568502e-4
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.899-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.899-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.899-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1877-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1877-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.899-6C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.899-6C>T
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31013
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1877-6C>T
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

2-33468731-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468731
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468731
    reference: chr 2
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.901A>T
  hgvsp: ENSP00000374653.4:p.Ile301Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1879A>T
  hgvsp: ENSP00000386043.2:p.Ile627Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.901A>T
  hgvsp: ENSP00000384091.1:p.Ile301Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.901A>T
  hgvsp: ENSP00000384373.1:p.Ile301Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1879A>T
  hgvsp: ENSP00000346467.3:p.Ile627Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.901A>T
  hgvsp: ENSP00000385359.1:p.Ile301Phe
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-54A>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.901A>T
  hgvsp: ENSP00000393057.2:p.Ile301Phe
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile627Phe
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

2-33468740-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468740
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468740
    reference: chr 2
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1888T>G
  hgvsp: ENSP00000386043.2:p.Cys630Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.910T>G
  hgvsp: ENSP00000384373.1:p.Cys304Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1888T>G
  hgvsp: ENSP00000346467.3:p.Cys630Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.910T>G
  hgvsp: ENSP00000385359.1:p.Cys304Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.910T>G
  hgvsp: ENSP00000374653.4:p.Cys304Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-45T>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.910T>G
  hgvsp: ENSP00000393057.2:p.Cys304Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.910T>G
  hgvsp: ENSP00000384091.1:p.Cys304Gly
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9385
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys630Gly
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

2-33468745-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468745
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468745
    reference: chr 2
allele count: 9
allele frequency: 7.416441426593711e-5
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.915G>C
  hgvsp: ENSP00000384091.1:p.Gln305His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1893G>C
  hgvsp: ENSP00000386043.2:p.Gln631His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.915G>C
  hgvsp: ENSP00000374653.4:p.Gln305His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1893G>C
  hgvsp: ENSP00000346467.3:p.Gln631His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.915G>C
  hgvsp: ENSP00000393057.2:p.Gln305His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-40G>C
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.915G>C
  hgvsp: ENSP00000384373.1:p.Gln305His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.915G>C
  hgvsp: ENSP00000385359.1:p.Gln305His
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln631His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

2-33468750-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468750
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468750
    reference: chr 2
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1898A>G
  hgvsp: ENSP00000386043.2:p.Gln633Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.920A>G
  hgvsp: ENSP00000374653.4:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.920A>G
  hgvsp: ENSP00000393057.2:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1898A>G
  hgvsp: ENSP00000346467.3:p.Gln633Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.920A>G
  hgvsp: ENSP00000384373.1:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.920A>G
  hgvsp: ENSP00000385359.1:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.920A>G
  hgvsp: ENSP00000384091.1:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-35A>G
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln633Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

2-33468762-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468762
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468762
    reference: chr 2
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.932C>G
  hgvsp: ENSP00000385359.1:p.Pro311Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.932C>G
  hgvsp: ENSP00000374653.4:p.Pro311Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.932C>G
  hgvsp: ENSP00000393057.2:p.Pro311Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-23C>G
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1910C>G
  hgvsp: ENSP00000346467.3:p.Pro637Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1910C>G
  hgvsp: ENSP00000386043.2:p.Pro637Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.932C>G
  hgvsp: ENSP00000384373.1:p.Pro311Arg
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.932C>G
  hgvsp: ENSP00000384091.1:p.Pro311Arg
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31009
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro637Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

2-33468783-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468783
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468783
    reference: chr 2
allele count: 8
allele frequency: 6.590111537637774e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.953C>T
  hgvsp: ENSP00000384091.1:p.Thr318Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1931C>T
  hgvsp: ENSP00000386043.2:p.Thr644Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.953C>T
  hgvsp: ENSP00000384373.1:p.Thr318Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.953C>T
  hgvsp: ENSP00000393057.2:p.Thr318Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.953C>T
  hgvsp: ENSP00000374653.4:p.Thr318Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.953C>T
  hgvsp: ENSP00000385359.1:p.Thr318Ile
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1931C>T
  hgvsp: ENSP00000346467.3:p.Thr644Ile
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31015
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr644Ile
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-33468791-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468791
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468791
    reference: chr 2
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1939A>G
  hgvsp: ENSP00000386043.2:p.Ser647Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.961A>G
  hgvsp: ENSP00000385359.1:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.961A>G
  hgvsp: ENSP00000393057.2:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1939A>G
  hgvsp: ENSP00000346467.3:p.Ser647Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.7A>G
  hgvsp: ENSP00000415412.1:p.Ser3Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.961A>G
  hgvsp: ENSP00000384373.1:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.961A>G
  hgvsp: ENSP00000384091.1:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.961A>G
  hgvsp: ENSP00000374653.4:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3927
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser647Gly
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

2-33468797-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468797
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468797
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.967C>G
  hgvsp: ENSP00000384373.1:p.Arg323Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1945C>G
  hgvsp: ENSP00000346467.3:p.Arg649Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.967C>G
  hgvsp: ENSP00000384091.1:p.Arg323Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.967C>G
  hgvsp: ENSP00000374653.4:p.Arg323Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.967C>G
  hgvsp: ENSP00000385359.1:p.Arg323Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.967C>G
  hgvsp: ENSP00000393057.2:p.Arg323Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.13C>G
  hgvsp: ENSP00000415412.1:p.Arg5Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1945C>G
  hgvsp: ENSP00000386043.2:p.Arg649Gly
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3834
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9465
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg649Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

2-33468798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468798
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468798
    reference: chr 2
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.968G>A
  hgvsp: ENSP00000374653.4:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.968G>A
  hgvsp: ENSP00000393057.2:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.968G>A
  hgvsp: ENSP00000384373.1:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.968G>A
  hgvsp: ENSP00000385359.1:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1946G>A
  hgvsp: ENSP00000346467.3:p.Arg649Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.968G>A
  hgvsp: ENSP00000384091.1:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.14G>A
  hgvsp: ENSP00000415412.1:p.Arg5Gln
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1946G>A
  hgvsp: ENSP00000386043.2:p.Arg649Gln
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8025
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg649Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

2-33468806-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468806
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468806
    reference: chr 2
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.22T>G
  hgvsp: ENSP00000415412.1:p.Cys8Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.976T>G
  hgvsp: ENSP00000393057.2:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.976T>G
  hgvsp: ENSP00000384373.1:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1954T>G
  hgvsp: ENSP00000346467.3:p.Cys652Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1954T>G
  hgvsp: ENSP00000386043.2:p.Cys652Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.976T>G
  hgvsp: ENSP00000385359.1:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.976T>G
  hgvsp: ENSP00000374653.4:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.976T>G
  hgvsp: ENSP00000384091.1:p.Cys326Gly
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys652Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-33468819-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468819
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468819
    reference: chr 2
allele count: 7
allele frequency: 5.766347595433053e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.35T>A
  hgvsp: ENSP00000415412.1:p.Phe12Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.989T>A
  hgvsp: ENSP00000384091.1:p.Phe330Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.989T>A
  hgvsp: ENSP00000384373.1:p.Phe330Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.989T>A
  hgvsp: ENSP00000374653.4:p.Phe330Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.989T>A
  hgvsp: ENSP00000393057.2:p.Phe330Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1967T>A
  hgvsp: ENSP00000346467.3:p.Phe656Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.989T>A
  hgvsp: ENSP00000385359.1:p.Phe330Tyr
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1967T>A
  hgvsp: ENSP00000386043.2:p.Phe656Tyr
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe656Tyr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

2-33468825-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468825
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468825
    reference: chr 2
allele count: 6
allele frequency: 4.942909396470763e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.995C>T
  hgvsp: ENSP00000384091.1:p.Pro332Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.995C>T
  hgvsp: ENSP00000385359.1:p.Pro332Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.995C>T
  hgvsp: ENSP00000374653.4:p.Pro332Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1973C>T
  hgvsp: ENSP00000386043.2:p.Pro658Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.995C>T
  hgvsp: ENSP00000384373.1:p.Pro332Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.995C>T
  hgvsp: ENSP00000393057.2:p.Pro332Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1973C>T
  hgvsp: ENSP00000346467.3:p.Pro658Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.41C>T
  hgvsp: ENSP00000415412.1:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro658Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

2-33468826-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468826
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468826
    reference: chr 2
allele count: 3
allele frequency: 2.471536142096851e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.996G>A
  hgvsp: ENST00000418533.2:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.42G>A
  hgvsp: ENST00000413303.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.996G>A
  hgvsp: ENST00000404525.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.996G>A
  hgvsp: ENST00000402934.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1974G>A
  hgvsp: ENST00000354476.3:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1974G>A
  hgvsp: ENST00000404816.2:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.996G>A
  hgvsp: ENST00000390003.4:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.996G>A
  hgvsp: ENST00000407925.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31010
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Pro658Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

2-33468827-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468827
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468827
    reference: chr 2
allele count: 4
allele frequency: 3.295327225993541e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1975G>C
  hgvsp: ENSP00000386043.2:p.Asp659His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.997G>C
  hgvsp: ENSP00000393057.2:p.Asp333His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1975G>C
  hgvsp: ENSP00000346467.3:p.Asp659His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.43G>C
  hgvsp: ENSP00000415412.1:p.Asp15His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.997G>C
  hgvsp: ENSP00000385359.1:p.Asp333His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.997G>C
  hgvsp: ENSP00000384373.1:p.Asp333His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.997G>C
  hgvsp: ENSP00000384091.1:p.Asp333His
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.997G>C
  hgvsp: ENSP00000374653.4:p.Asp333His
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3832
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp659His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

2-33468831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33468831
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 33468831
    reference: chr 2
allele count: 12
allele frequency: 9.886470365305081e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000346467
  ensembl transcript: ENST00000354476
  gene symbol: LTBP1
  hgvsc: ENST00000354476.3:c.1979C>T
  hgvsp: ENSP00000346467.3:p.Pro660Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384373
  ensembl transcript: ENST00000402934
  gene symbol: LTBP1
  hgvsc: ENST00000402934.1:c.1001C>T
  hgvsp: ENSP00000384373.1:p.Pro334Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000415412
  ensembl transcript: ENST00000413303
  gene symbol: LTBP1
  hgvsc: ENST00000413303.1:c.47C>T
  hgvsp: ENSP00000415412.1:p.Pro16Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000374653
  ensembl transcript: ENST00000390003
  gene symbol: LTBP1
  hgvsc: ENST00000390003.4:c.1001C>T
  hgvsp: ENSP00000374653.4:p.Pro334Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000386043
  ensembl transcript: ENST00000404816
  gene symbol: LTBP1
  hgvsc: ENST00000404816.2:c.1979C>T
  hgvsp: ENSP00000386043.2:p.Pro660Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000385359
  ensembl transcript: ENST00000404525
  gene symbol: LTBP1
  hgvsc: ENST00000404525.1:c.1001C>T
  hgvsp: ENSP00000385359.1:p.Pro334Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000393057
  ensembl transcript: ENST00000418533
  gene symbol: LTBP1
  hgvsc: ENST00000418533.2:c.1001C>T
  hgvsp: ENSP00000393057.2:p.Pro334Leu
  variant of: http://identifiers.org/hgnc/6714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000049323
  ensembl protein: ENSP00000384091
  ensembl transcript: ENST00000407925
  gene symbol: LTBP1
  hgvsc: ENST00000407925.1:c.1001C>T
  hgvsp: ENSP00000384091.1:p.Pro334Leu
  variant of: http://identifiers.org/hgnc/6714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro660Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.702243557008137e-5
allele num: 58746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -1.937e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

VQSLOD
type: SiteQuality
SIO_000300: -2.52e0

DP
type: SiteQuality
SIO_000300: 1.361616e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.054185114906177e-4
allele num: 9486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14440
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.310735e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.243e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.396e0

QD
type: SiteQuality
SIO_000300: 1.342e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

GenotypeQuality
all individuals: 112
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.949270326615705e-5
allele num: 14390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 1.297444e6

QD
type: SiteQuality
SIO_000300: 1.53e1

GenotypeQuality
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3173
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2709
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variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.047216349541931e-5
allele num: 14190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

DP
type: SiteQuality
SIO_000300: 1.242817e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 4.568e0

GenotypeQuality
all individuals: 847
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
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variant carriers: 0

GenotypeQuality
all individuals: 2660
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2954
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 3209
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.799208348326736e-5
allele num: 55580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14178
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.04e1

DP
type: SiteQuality
SIO_000300: 1.241866e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -1.899e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.021e0

GenotypeQuality
all individuals: 21985
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4339
bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 696
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variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5276
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.691124442393478e-5
allele num: 13002
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.977e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.683e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.022122e6

QD
type: SiteQuality
SIO_000300: 7.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.461e0

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
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variant carriers: 1

GenotypeQuality
all individuals: 478
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variant carriers: 0

GenotypeQuality
all individuals: 5833
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variant carriers: 0

GenotypeQuality
all individuals: 379
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variant carriers: 0

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46972
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.744733581164808e-5
allele num: 12912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.936e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.162e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.015255e6

VQSLOD
type: SiteQuality
SIO_000300: -2.707e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.063e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
all individuals: 426
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variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20922
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variant carriers: 0

GenotypeQuality
all individuals: 689
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variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
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GenotypeQuality
all individuals: 476
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GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 699
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GenotypeQuality
all individuals: 4674
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.410039481105471e-4
allele num: 7092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12810
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.09e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

QD
type: SiteQuality
SIO_000300: 1.197e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e-1

DP
type: SiteQuality
SIO_000300: 1.007416e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 692
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.955416503715291e-4
allele num: 5114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45880
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.912363067292645e-4
allele num: 12780
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.99728e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5212
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variant carriers: 1

GenotypeQuality
all individuals: 1652
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.239340738086707e-5
allele num: 44656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6684
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

DP
type: SiteQuality
SIO_000300: 9.88209e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.96e-1

GenotypeQuality
all individuals: 377
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variant carriers: 0

GenotypeQuality
all individuals: 3600
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GenotypeQuality
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GenotypeQuality
all individuals: 475
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GenotypeQuality
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GenotypeQuality
all individuals: 3208
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GenotypeQuality
all individuals: 911
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GenotypeQuality
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GenotypeQuality
all individuals: 730
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GenotypeQuality
all individuals: 4826
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

QD
type: SiteQuality
SIO_000300: 1.0e1

DP
type: SiteQuality
SIO_000300: 9.72105e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e0

FS
type: SiteQuality
SIO_000300: 2.039e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 3600
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5919
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.70299727520436e-4
allele num: 5872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.151287903488751e-5
allele num: 12268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.72105e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e0

QD
type: SiteQuality
SIO_000300: 1.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

FS
type: SiteQuality
SIO_000300: 2.039e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1957
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variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.753155680224404e-4
allele num: 11408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.880328e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

QD
type: SiteQuality
SIO_000300: 1.568e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514967882680887e-5
allele num: 66008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.851e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

DP
type: SiteQuality
SIO_000300: 1.887781e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.043e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1986
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variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224140041620761e-4
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

FS
type: SiteQuality
SIO_000300: 3.263e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

DP
type: SiteQuality
SIO_000300: 1.90184e6

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.579e1

VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13817
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variant carriers: 2

GenotypeQuality
all individuals: 2034
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224739742804654e-4
allele num: 16330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.113e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 8.518000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e0

VQSLOD
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 1.926134e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.079e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13838
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023980162690133e-5
allele num: 66138
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

QD
type: SiteQuality
SIO_000300: 1.594e1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-2

DP
type: SiteQuality
SIO_000300: 1.942575e6

FS
type: SiteQuality
SIO_000300: 2.121e0

MQRankSum
type: SiteQuality
SIO_000300: -2.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.397e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.446e0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.155e1

DP
type: SiteQuality
SIO_000300: 1.965181e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2117
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GenotypeQuality
all individuals: 136
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.35595263205472e-4
allele num: 66374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.596e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 1.968808e6

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.338e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.648e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.377e0

FS
type: SiteQuality
SIO_000300: 4.411e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.969788e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.578e0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 115
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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InbreedingCoeff
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MQRankSum
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SIO_000300: 1.1e-1

FS
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MQ
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VQSLOD
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BaseQRankSum
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SIO_000300: -3.24e0

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

DP
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SIO_000300: 1.971298e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.006614552014432e-5
allele num: 66520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.236e0

ReadPosRankSum
type: SiteQuality
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DP
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MQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.672e0

DP
type: SiteQuality
SIO_000300: 1.978059e6

VQSLOD
type: SiteQuality
SIO_000300: -1.986e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.503828254015913e-5
allele num: 66610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

DP
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SIO_000300: 1.981638e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.619e0

FS
type: SiteQuality
SIO_000300: 6.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 5255
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.091e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 1.029e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.982424e6

QD
type: SiteQuality
SIO_000300: 1.669e1

VQSLOD
type: SiteQuality
SIO_000300: -2.09e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
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VQSLOD
type: SiteQuality
SIO_000300: -1.908e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.354e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.115e0

DP
type: SiteQuality
SIO_000300: 1.983144e6

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.329e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.984115e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.000300030003e-5
allele num: 66660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.466805338880222e-4
allele num: 11538
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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QD
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SIO_000300: 1.254e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818181818181818e-4
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.027550711474417e-4
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.986367e6

ReadPosRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.137e0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.072e0

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.952e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.042e0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14024
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.359e0

QD
type: SiteQuality
SIO_000300: 2.725e1

DP
type: SiteQuality
SIO_000300: 1.986747e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 21
bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 3585
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14048
bin: 9.75e1
variant carriers: 32

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 30
allele frequency: 2.884060757546626e-3
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

DP
type: SiteQuality
SIO_000300: 1.988374e6

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 2.502e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.779e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14050
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4623
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.676e0

VQSLOD
type: SiteQuality
SIO_000300: -2.463e0

FS
type: SiteQuality
SIO_000300: 1.1452e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e0

QD
type: SiteQuality
SIO_000300: 1.466e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-1

DP
type: SiteQuality
SIO_000300: 1.988455e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

GenotypeQuality
all individuals: 1580
bin: 7.75e1
variant carriers: 111

GenotypeQuality
all individuals: 623
bin: 8.75e1
variant carriers: 83

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2572
bin: 6.75e1
variant carriers: 77

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 14

GenotypeQuality
all individuals: 55
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1332
bin: 8.25e1
variant carriers: 125

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 32

GenotypeQuality
all individuals: 43664
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variant carriers: 39604

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 6

South Asian
type: Population
allele count: 5470
allele frequency: 3.315151515151515e-1
allele num: 16500
num of homozygotes: 950

European (Finnish)
type: Population
allele count: 3669
allele frequency: 5.557406846410179e-1
allele num: 6602
num of homozygotes: 1013

Other
type: Population
allele count: 374
allele frequency: 4.1280353200883e-1
allele num: 906
num of homozygotes: 83

Latino
type: Population
allele count: 4742
allele frequency: 4.110610263522885e-1
allele num: 11536
num of homozygotes: 976

East Asian
type: Population
allele count: 2969
allele frequency: 3.451522901650779e-1
allele num: 8602
num of homozygotes: 517

African
type: Population
allele count: 2354
allele frequency: 2.26215644820296e-1
allele num: 10406
num of homozygotes: 272

European (Non-Finnish)
type: Population
allele count: 32679
allele frequency: 4.904547501125619e-1
allele num: 66630
num of homozygotes: 8021

FS
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.682e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.69e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

DP
type: SiteQuality
SIO_000300: 3.836923e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.639e0

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10426
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.037e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.077e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.229e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

MQRankSum
type: SiteQuality
SIO_000300: -1.451e0

DP
type: SiteQuality
SIO_000300: 2.08357e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 8569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26690
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variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.588e0

DP
type: SiteQuality
SIO_000300: 2.082374e6

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

QD
type: SiteQuality
SIO_000300: 1.39e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-2

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 8536
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.676e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.443e0

DP
type: SiteQuality
SIO_000300: 2.079656e6

QD
type: SiteQuality
SIO_000300: 1.45e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8534
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
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variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10396
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.34e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

FS
type: SiteQuality
SIO_000300: 2.99e0

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.078247e6

GenotypeQuality
all individuals: 1371
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
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GenotypeQuality
all individuals: 484
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10964
bin: 9.75e1
variant carriers: 1046

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 31
allele frequency: 2.699878070022644e-3
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21713729308666e-4
allele num: 16432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.711741842176625e-4
allele num: 66378
num of homozygotes: 0

African
type: Population
allele count: 1052
allele frequency: 1.013682790518404e-1
allele num: 10378
num of homozygotes: 47

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 1.651e1

VQSLOD
type: SiteQuality
SIO_000300: 6.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

DP
type: SiteQuality
SIO_000300: 2.079327e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.51e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
all individuals: 1998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24853
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

MQ
type: SiteQuality
SIO_000300: 5.823e1

VQSLOD
type: SiteQuality
SIO_000300: -2.314e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 5.19e0

FS
type: SiteQuality
SIO_000300: 1.698e0

DP
type: SiteQuality
SIO_000300: 2.045465e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 1.296e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 2.021651e6

FS
type: SiteQuality
SIO_000300: 2.336e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.421e0

MQ
type: SiteQuality
SIO_000300: 4.248e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.26e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2428
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.956314e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

MQRankSum
type: SiteQuality
SIO_000300: 8.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

MQ
type: SiteQuality
SIO_000300: 6.045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 920
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GenotypeQuality
all individuals: 3813
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

FS
type: SiteQuality
SIO_000300: 5.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e0

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

DP
type: SiteQuality
SIO_000300: 2.610978e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

QD
type: SiteQuality
SIO_000300: 1.528e1

GenotypeQuality
all individuals: 3817
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2466
bin: 8.75e1
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GenotypeQuality
all individuals: 3877
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.367e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: -6.069e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.309e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.036e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 2.615393e6

GenotypeQuality
all individuals: 2466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.287e1

FS
type: SiteQuality
SIO_000300: 4.681e0

MQ
type: SiteQuality
SIO_000300: 5.861e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 2.618873e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.642e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.085e0

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 3815
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 265
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 212
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variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.316423442205235e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137981831573779e-5
allele num: 16292
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

DP
type: SiteQuality
SIO_000300: 2.619737e6

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.205e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 4.915e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-2

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.12294881214793e-5
allele num: 16332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 2.628026e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

FS
type: SiteQuality
SIO_000300: 3.486e0

QD
type: SiteQuality
SIO_000300: 1.438e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 108
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004085556356645e-5
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.91e-1

DP
type: SiteQuality
SIO_000300: 2.629088e6

FS
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3832
bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3926
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.630828e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.763e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.802e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 9.48e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -4.029e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

FS
type: SiteQuality
SIO_000300: 3.221e0

DP
type: SiteQuality
SIO_000300: 2.631781e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.74e0

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.286e1

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.219958521410272e-4
allele num: 16394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 2.633933e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9090
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.411e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.662e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: 3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.373e0

FS
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.636448e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 31010
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.02e-1

MQ
type: SiteQuality
SIO_000300: 5.371e1

FS
type: SiteQuality
SIO_000300: 2.084e0

QD
type: SiteQuality
SIO_000300: 1.545e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.129e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

DP
type: SiteQuality
SIO_000300: 2.636827e6

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9116
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.595604775912787e-4
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.919e1

DP
type: SiteQuality
SIO_000300: 2.637238e6

QD
type: SiteQuality
SIO_000300: 1.412e1

VQSLOD
type: SiteQuality
SIO_000300: -1.318e0

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.67e-1

FS
type: SiteQuality
SIO_000300: 1.1089e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.455e0

MQRankSum
type: SiteQuality
SIO_000300: 7.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

DP
type: SiteQuality
SIO_000300: 2.637958e6

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.729771285796656e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.31e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

DP
type: SiteQuality
SIO_000300: 2.639775e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.25e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.49e-1

QD
type: SiteQuality
SIO_000300: 4.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66696
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African
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South Asian
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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African
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allele frequency: 3.843936190659235e-4
allele num: 10406
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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QD
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
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East Asian
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South Asian
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allele frequency: 0.0e0
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African
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Other
type: Population
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num of homozygotes: 0

MQ
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SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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DP
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BaseQRankSum
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SIO_000300: -3.605e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele num: 6614
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10406
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South Asian
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Other
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.751e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
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DP
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MQ
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
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SIO_000300: 4.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 8
allele frequency: 4.84613520717228e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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FS
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SIO_000300: 1.116e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.455e0

VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11578
num of homozygotes: 0

Other
type: Population
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allele num: 908
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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ReadPosRankSum
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DP
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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Other
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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QD
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Latino
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Other
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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South Asian
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31012
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.49288176232579e-5
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

FS
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 2.642715e6

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31013
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496133325340207e-5
allele num: 66724
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.64236e6

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

FS
type: SiteQuality
SIO_000300: 3.416e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeQuality
all individuals: 3769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9453
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

FS
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 2.642183e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.167e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31011
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456022118541559e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.073e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

FS
type: SiteQuality
SIO_000300: 5.101e0

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.897e1

QD
type: SiteQuality
SIO_000300: 1.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

DP
type: SiteQuality
SIO_000300: 2.642183e6