19-53116661-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116661
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116661
    reference: chr 19
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1157C>T
  hgvsp: ENSP00000445993.1:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1157C>T
  hgvsp: ENSP00000445470.1:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1157C>T
  hgvsp: ENSP00000439681.1:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1157C>T
  hgvsp: ENSP00000472619.1:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1157C>T
  hgvsp: ENSP00000301096.3:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1073C>T
  hgvsp: ENSP00000375666.4:p.Ser358Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1157C>T
  hgvsp: ENSP00000440713.1:p.Ser386Leu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1214C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5528C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1250C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6827
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser386Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

19-53116668-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116668
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116668
    reference: chr 19
allele count: 11
allele frequency: 9.06409136604097e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1150C>T
  hgvsp: ENSP00000439681.1:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1150C>T
  hgvsp: ENSP00000440713.1:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1207C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1150C>T
  hgvsp: ENSP00000445993.1:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1150C>T
  hgvsp: ENSP00000472619.1:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1066C>T
  hgvsp: ENSP00000375666.4:p.Gln356Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1150C>T
  hgvsp: ENSP00000445470.1:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1150C>T
  hgvsp: ENSP00000301096.3:p.Gln384Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5521C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1243C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11996
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln384Ter
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-53116672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116672
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116672
    reference: chr 19
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1146C>T
  hgvsp: ENST00000545872.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1146C>T
  hgvsp: ENST00000541777.2:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1146C>T
  hgvsp: ENST00000544146.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1062C>T
  hgvsp: ENST00000391789.4:c.1062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1146C>T
  hgvsp: ENST00000597597.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1146C>T
  hgvsp: ENST00000301096.3:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5517C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1146C>T
  hgvsp: ENST00000536937.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1203C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1239C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2852
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe382Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

19-53116676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116676
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116676
    reference: chr 19
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1142C>T
  hgvsp: ENSP00000445993.1:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1142C>T
  hgvsp: ENSP00000445470.1:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1142C>T
  hgvsp: ENSP00000439681.1:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1142C>T
  hgvsp: ENSP00000472619.1:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5513C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1142C>T
  hgvsp: ENSP00000440713.1:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1058C>T
  hgvsp: ENSP00000375666.4:p.Ala353Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1199C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1235C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1142C>T
  hgvsp: ENSP00000301096.3:p.Ala381Val
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala381Val
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-53116681-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116681
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116681
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1053C>G
  hgvsp: ENSP00000375666.4:p.Asp351Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1137C>G
  hgvsp: ENSP00000445470.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1194C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1137C>G
  hgvsp: ENSP00000439681.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1137C>G
  hgvsp: ENSP00000440713.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1137C>G
  hgvsp: ENSP00000445993.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1137C>G
  hgvsp: ENSP00000472619.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1230C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5508C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1137C>G
  hgvsp: ENSP00000301096.3:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp379Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

19-53116686-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116686
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116686
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1132T>C
  hgvsp: ENSP00000472619.1:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1132T>C
  hgvsp: ENSP00000445470.1:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5503T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1132T>C
  hgvsp: ENSP00000440713.1:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1132T>C
  hgvsp: ENSP00000445993.1:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1132T>C
  hgvsp: ENSP00000439681.1:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1189T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1225T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1048T>C
  hgvsp: ENSP00000375666.4:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1132T>C
  hgvsp: ENSP00000301096.3:p.Cys378Arg
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys378Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

19-53116700-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116700
    reference: chr 19
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1211A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1118A>G
  hgvsp: ENSP00000445470.1:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1175A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1118A>G
  hgvsp: ENSP00000301096.3:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1034A>G
  hgvsp: ENSP00000375666.4:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1118A>G
  hgvsp: ENSP00000472619.1:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1118A>G
  hgvsp: ENSP00000439681.1:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5489A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1118A>G
  hgvsp: ENSP00000445993.1:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1118A>G
  hgvsp: ENSP00000440713.1:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr373Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP

19-53116700-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116700
    reference: chr 19
allele count: 100
allele frequency: 8.238318064983852e-4
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5489A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1118A>C
  hgvsp: ENSP00000439681.1:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1118A>C
  hgvsp: ENSP00000472619.1:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1118A>C
  hgvsp: ENSP00000445993.1:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1211A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1034A>C
  hgvsp: ENSP00000375666.4:p.Tyr345Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1118A>C
  hgvsp: ENSP00000445470.1:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1118A>C
  hgvsp: ENSP00000440713.1:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1118A>C
  hgvsp: ENSP00000301096.3:p.Tyr373Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1175A>C
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28429
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3523
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr373Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

19-53116713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116713
    reference: chr 19
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1105G>A
  hgvsp: ENSP00000301096.3:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1105G>A
  hgvsp: ENSP00000439681.1:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1105G>A
  hgvsp: ENSP00000472619.1:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1198G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1105G>A
  hgvsp: ENSP00000445470.1:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1105G>A
  hgvsp: ENSP00000440713.1:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1162G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1021G>A
  hgvsp: ENSP00000375666.4:p.Gly341Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1105G>A
  hgvsp: ENSP00000445993.1:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5476G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly369Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-53116714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116714
    reference: chr 19
allele count: 14
allele frequency: 1.153345525843178e-4
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1104C>T
  hgvsp: ENST00000597597.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1104C>T
  hgvsp: ENST00000301096.3:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1104C>T
  hgvsp: ENST00000541777.2:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1104C>T
  hgvsp: ENST00000544146.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1104C>T
  hgvsp: ENST00000545872.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1104C>T
  hgvsp: ENST00000536937.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1020C>T
  hgvsp: ENST00000391789.4:c.1020C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5475C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1161C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1197C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30115
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala368Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-53116714-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116714
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5475C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1161C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1104C>A
  hgvsp: ENST00000536937.1:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1104C>A
  hgvsp: ENST00000301096.3:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1104C>A
  hgvsp: ENST00000541777.2:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1104C>A
  hgvsp: ENST00000544146.1:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1104C>A
  hgvsp: ENST00000545872.1:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1020C>A
  hgvsp: ENST00000391789.4:c.1020C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1197C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1104C>A
  hgvsp: ENST00000597597.1:c.1104C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11624
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala368Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-53116717-A-AAGCAGAACTCAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116717
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116729
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: AAGCAGAACTCAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His367delinsGlnTerValLeuLeu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-53116717-A-AAGCAGAACTCATTGCCTAAACTCAGGCCCTCACTCTTGCAAAGGGAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116717
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116764
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: AAGCAGAACTCATTGCCTAAACTCAGGCCCTCACTCTTGCAAAGGGAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His367GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsp: ENSP00000375666.4:p.His339GlnfsTer90
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 28415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His367GlnfsTer90
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-53116719-G-GCCTAAACTCAGGCCCTCACTCTTGCAAAGGGACTACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116719
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116757
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: GCCTAAACTCAGGCCCTCACTCTTGCAAAGGGACTACAC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsp: ENSP00000375666.4:p.His339ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His367ValfsTer2
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11625
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His367ValfsTer2
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/19-53116720-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116720
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116720
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1155T>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1098T>G
  hgvsp: ENSP00000440713.1:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1098T>G
  hgvsp: ENSP00000445470.1:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1014T>G
  hgvsp: ENSP00000375666.4:p.Ile338Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1098T>G
  hgvsp: ENSP00000301096.3:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5469T>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1098T>G
  hgvsp: ENSP00000445993.1:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1098T>G
  hgvsp: ENSP00000472619.1:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1098T>G
  hgvsp: ENSP00000439681.1:p.Ile366Met
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1191T>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile366Met
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-53116726-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116727
    reference: chr 19
allele count: 5
allele frequency: 4.119430529923544e-5
allele num: 121376
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1091dupT
  hgvsp: ENSP00000445993.1:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1091dupT
  hgvsp: ENSP00000445470.1:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1091dupT
  hgvsp: ENSP00000472619.1:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1148dupT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1091dupT
  hgvsp: ENSP00000301096.3:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1184dupT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1091dupT
  hgvsp: ENSP00000439681.1:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5462dupT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1091dupT
  hgvsp: ENSP00000440713.1:p.Ile365AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1007dupT
  hgvsp: ENSP00000375666.4:p.Ile337AspfsTer6
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile365AspfsTer6
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-53116727-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116727
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116727
    reference: chr 19
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1184T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1091T>C
  hgvsp: ENSP00000472619.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1091T>C
  hgvsp: ENSP00000445470.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1091T>C
  hgvsp: ENSP00000439681.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1091T>C
  hgvsp: ENSP00000301096.3:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1148T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1091T>C
  hgvsp: ENSP00000440713.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1091T>C
  hgvsp: ENSP00000445993.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5462T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.1007T>C
  hgvsp: ENSP00000375666.4:p.Leu336Pro
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu364Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-53116736-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116736
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116736
    reference: chr 19
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5453C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.998C>T
  hgvsp: ENSP00000375666.4:p.Ala333Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1082C>T
  hgvsp: ENSP00000472619.1:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1082C>T
  hgvsp: ENSP00000301096.3:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1082C>T
  hgvsp: ENSP00000440713.1:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1082C>T
  hgvsp: ENSP00000439681.1:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1082C>T
  hgvsp: ENSP00000445993.1:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1139C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1175C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1082C>T
  hgvsp: ENSP00000445470.1:p.Ala361Val
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala361Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-53116748-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116748
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116748
    reference: chr 19
allele count: 235
allele frequency: 1.936068545065085e-3
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1163A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1070A>G
  hgvsp: ENSP00000445470.1:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1070A>G
  hgvsp: ENSP00000445993.1:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1070A>G
  hgvsp: ENSP00000439681.1:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1127A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1070A>G
  hgvsp: ENSP00000472619.1:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1070A>G
  hgvsp: ENSP00000440713.1:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.986A>G
  hgvsp: ENSP00000375666.4:p.Asn329Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1070A>G
  hgvsp: ENSP00000301096.3:p.Asn357Ser
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5441A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 28296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn357Ser
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-53116751-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116751
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116751
    reference: chr 19
allele count: 6
allele frequency: 4.943561011782154e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1067G>A
  hgvsp: ENSP00000301096.3:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1124G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1067G>A
  hgvsp: ENSP00000445470.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1160G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1067G>A
  hgvsp: ENSP00000439681.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1067G>A
  hgvsp: ENSP00000440713.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1067G>A
  hgvsp: ENSP00000472619.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1067G>A
  hgvsp: ENSP00000445993.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.983G>A
  hgvsp: ENSP00000375666.4:p.Arg328His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5438G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg356His
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

19-53116752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116752
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116752
    reference: chr 19
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1159C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1066C>T
  hgvsp: ENSP00000445993.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1066C>T
  hgvsp: ENSP00000445470.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1066C>T
  hgvsp: ENSP00000301096.3:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.982C>T
  hgvsp: ENSP00000375666.4:p.Arg328Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1066C>T
  hgvsp: ENSP00000472619.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1066C>T
  hgvsp: ENSP00000439681.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1123C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5437C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1066C>T
  hgvsp: ENSP00000440713.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg356Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

19-53116755-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116755
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116755
    reference: chr 19
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5434A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.979A>C
  hgvsp: ENSP00000375666.4:p.Ser327Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1156A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1063A>C
  hgvsp: ENSP00000445470.1:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1063A>C
  hgvsp: ENSP00000445993.1:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1120A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1063A>C
  hgvsp: ENSP00000301096.3:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1063A>C
  hgvsp: ENSP00000439681.1:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1063A>C
  hgvsp: ENSP00000472619.1:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1063A>C
  hgvsp: ENSP00000440713.1:p.Ser355Arg
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser355Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-53116763-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116763
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116763
    reference: chr 19
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1055A>G
  hgvsp: ENSP00000472619.1:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1055A>G
  hgvsp: ENSP00000439681.1:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1148A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1112A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1055A>G
  hgvsp: ENSP00000445993.1:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1055A>G
  hgvsp: ENSP00000445470.1:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1055A>G
  hgvsp: ENSP00000440713.1:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.971A>G
  hgvsp: ENSP00000375666.4:p.Lys324Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1055A>G
  hgvsp: ENSP00000301096.3:p.Lys352Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5426A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30025
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys352Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

19-53116770-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116770
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116770
    reference: chr 19
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1048T>C
  hgvsp: ENSP00000439681.1:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1048T>C
  hgvsp: ENSP00000301096.3:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1048T>C
  hgvsp: ENSP00000472619.1:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1048T>C
  hgvsp: ENSP00000440713.1:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1105T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1048T>C
  hgvsp: ENSP00000445470.1:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1048T>C
  hgvsp: ENSP00000445993.1:p.Cys350Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5419T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1141T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.964T>C
  hgvsp: ENSP00000375666.4:p.Cys322Arg
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12054
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys350Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

19-53116771-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116771
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116771
    reference: chr 19
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1104A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.963A>G
  hgvsp: ENST00000391789.4:c.963A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1047A>G
  hgvsp: ENST00000536937.1:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5418A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1047A>G
  hgvsp: ENST00000545872.1:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1047A>G
  hgvsp: ENST00000541777.2:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1140A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1047A>G
  hgvsp: ENST00000597597.1:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1047A>G
  hgvsp: ENST00000301096.3:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1047A>G
  hgvsp: ENST00000544146.1:c.1047A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu349Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

19-53116771-TTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCCAGTGATTTACTAGGGATGACTTGTGACTGAAGACCTTGCCACAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116771
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116687
    reference: chr 19
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsp: ENSP00000375666.4:p.His300_Ser327del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His328_Ser355del
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His328_Ser355del
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: TTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCCAGTGATTTACTAGGGATGACTTGTGACTGAAGACCTTGCCACAC
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

19-53116784-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116784
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116784
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1034A>G
  hgvsp: ENSP00000472619.1:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1034A>G
  hgvsp: ENSP00000445470.1:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1034A>G
  hgvsp: ENSP00000445993.1:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.950A>G
  hgvsp: ENSP00000375666.4:p.Tyr317Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1034A>G
  hgvsp: ENSP00000301096.3:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1034A>G
  hgvsp: ENSP00000440713.1:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1034A>G
  hgvsp: ENSP00000439681.1:p.Tyr345Cys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1127A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1091A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5405A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr345Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-53116785-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116785
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116785
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5404T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.949T>C
  hgvsp: ENSP00000375666.4:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1033T>C
  hgvsp: ENSP00000440713.1:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1090T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1033T>C
  hgvsp: ENSP00000445470.1:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1033T>C
  hgvsp: ENSP00000301096.3:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1033T>C
  hgvsp: ENSP00000445993.1:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1126T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1033T>C
  hgvsp: ENSP00000439681.1:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1033T>C
  hgvsp: ENSP00000472619.1:p.Tyr345His
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr345His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

19-53116789-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116789
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116789
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1086A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5400A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1122A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1029A>G
  hgvsp: ENST00000597597.1:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1029A>G
  hgvsp: ENST00000541777.2:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.945A>G
  hgvsp: ENST00000391789.4:c.945A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1029A>G
  hgvsp: ENST00000301096.3:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1029A>G
  hgvsp: ENST00000536937.1:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1029A>G
  hgvsp: ENST00000545872.1:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1029A>G
  hgvsp: ENST00000544146.1:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5933
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys343Lys
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-53116798-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116798
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116798
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1113T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1077T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5391T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1020T>C
  hgvsp: ENST00000544146.1:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1020T>C
  hgvsp: ENST00000541777.2:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1020T>C
  hgvsp: ENST00000597597.1:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1020T>C
  hgvsp: ENST00000545872.1:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1020T>C
  hgvsp: ENST00000536937.1:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1020T>C
  hgvsp: ENST00000301096.3:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.936T>C
  hgvsp: ENST00000391789.4:c.936T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr340Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

19-53116799-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116799
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116799
    reference: chr 19
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1019C>T
  hgvsp: ENSP00000445993.1:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1019C>T
  hgvsp: ENSP00000440713.1:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1112C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1019C>T
  hgvsp: ENSP00000472619.1:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5390C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1019C>T
  hgvsp: ENSP00000445470.1:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1019C>T
  hgvsp: ENSP00000301096.3:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1019C>T
  hgvsp: ENSP00000439681.1:p.Thr340Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.935C>T
  hgvsp: ENSP00000375666.4:p.Thr312Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1076C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr340Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

19-53116804-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116804
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116804
    reference: chr 19
allele count: 3
allele frequency: 2.472269378471478e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1014C>A
  hgvsp: ENST00000597597.1:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1014C>A
  hgvsp: ENST00000536937.1:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1014C>A
  hgvsp: ENST00000544146.1:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1014C>A
  hgvsp: ENST00000545872.1:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1014C>A
  hgvsp: ENST00000541777.2:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1071C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1014C>A
  hgvsp: ENST00000301096.3:c.1014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.930C>A
  hgvsp: ENST00000391789.4:c.930C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5385C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1107C>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6815
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile338Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

19-53116806-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116806
    reference: chr 19
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1012A>T
  hgvsp: ENSP00000440713.1:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5383A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1069A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1012A>T
  hgvsp: ENSP00000439681.1:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1012A>T
  hgvsp: ENSP00000472619.1:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1105A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.928A>T
  hgvsp: ENSP00000375666.4:p.Ile310Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1012A>T
  hgvsp: ENSP00000301096.3:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1012A>T
  hgvsp: ENSP00000445470.1:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1012A>T
  hgvsp: ENSP00000445993.1:p.Ile338Phe
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile338Phe
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

19-53116806-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116806
    reference: chr 19
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1012A>G
  hgvsp: ENSP00000439681.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1012A>G
  hgvsp: ENSP00000472619.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1105A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1012A>G
  hgvsp: ENSP00000445993.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.928A>G
  hgvsp: ENSP00000375666.4:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1012A>G
  hgvsp: ENSP00000440713.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1012A>G
  hgvsp: ENSP00000445470.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1012A>G
  hgvsp: ENSP00000301096.3:p.Ile338Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5383A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1069A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile338Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

19-53116811-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116811
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116811
    reference: chr 19
allele count: 683
allele frequency: 5.627420285078685e-3
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1007G>A
  hgvsp: ENSP00000445993.1:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1007G>A
  hgvsp: ENSP00000440713.1:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1007G>A
  hgvsp: ENSP00000445470.1:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1007G>A
  hgvsp: ENSP00000472619.1:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.923G>A
  hgvsp: ENSP00000375666.4:p.Trp308Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1100G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1007G>A
  hgvsp: ENSP00000439681.1:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1007G>A
  hgvsp: ENSP00000301096.3:p.Trp336Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5378G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1064G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 27976
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 11941
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.75e1
  variant carriers: 477
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp336Ter
num of homozygotes: 21
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-53116813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116813
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116813
    reference: chr 19
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1005C>T
  hgvsp: ENST00000544146.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1005C>T
  hgvsp: ENST00000536937.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1005C>T
  hgvsp: ENST00000597597.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1005C>T
  hgvsp: ENST00000301096.3:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5376C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1062C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1005C>T
  hgvsp: ENST00000545872.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1098C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.921C>T
  hgvsp: ENST00000391789.4:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1005C>T
  hgvsp: ENST00000541777.2:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6781
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His335His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-53116813-G-GTGAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116813
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116817
    reference: chr 19
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: GTGAT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1001_1004dupATCA
  hgvsp: ENSP00000301096.3:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1001_1004dupATCA
  hgvsp: ENSP00000472619.1:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1001_1004dupATCA
  hgvsp: ENSP00000445993.1:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.917_920dupATCA
  hgvsp: ENSP00000375666.4:p.His307GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1094_282+1097dupATCA
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1001_1004dupATCA
  hgvsp: ENSP00000440713.1:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5372_142+5375dupATCA
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1058_*1061dupATCA
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1001_1004dupATCA
  hgvsp: ENSP00000439681.1:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1001_1004dupATCA
  hgvsp: ENSP00000445470.1:p.His335GlnfsTer15
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His335GlnfsTer15
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

19-53116818-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116818
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116818
    reference: chr 19
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.1000A>C
  hgvsp: ENSP00000439681.1:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.1000A>C
  hgvsp: ENSP00000301096.3:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.916A>C
  hgvsp: ENSP00000375666.4:p.Asn306His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1057A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1093A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5371A>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.1000A>C
  hgvsp: ENSP00000472619.1:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.1000A>C
  hgvsp: ENSP00000445993.1:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.1000A>C
  hgvsp: ENSP00000445470.1:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.1000A>C
  hgvsp: ENSP00000440713.1:p.Asn334His
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2683
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn334His
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-53116821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116821
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116821
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1090G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.997G>A
  hgvsp: ENSP00000445470.1:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.997G>A
  hgvsp: ENSP00000439681.1:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.997G>A
  hgvsp: ENSP00000445993.1:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.997G>A
  hgvsp: ENSP00000440713.1:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.997G>A
  hgvsp: ENSP00000472619.1:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1054G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.913G>A
  hgvsp: ENSP00000375666.4:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.997G>A
  hgvsp: ENSP00000301096.3:p.Val333Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5368G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val333Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-53116831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116831
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116831
    reference: chr 19
allele count: 3
allele frequency: 2.472432378974435e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1080G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.987G>A
  hgvsp: ENST00000544146.1:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.987G>A
  hgvsp: ENST00000536937.1:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.903G>A
  hgvsp: ENST00000391789.4:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5358G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.987G>A
  hgvsp: ENST00000541777.2:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.987G>A
  hgvsp: ENST00000597597.1:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.987G>A
  hgvsp: ENST00000545872.1:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1044G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.987G>A
  hgvsp: ENST00000301096.3:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11994
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys329Lys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-53116846-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116846
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116846
    reference: chr 19
allele count: 5
allele frequency: 4.12139995713744e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5343G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1029G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.888G>T
  hgvsp: ENSP00000375666.4:p.Lys296Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.972G>T
  hgvsp: ENSP00000445470.1:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.972G>T
  hgvsp: ENSP00000440713.1:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.972G>T
  hgvsp: ENSP00000445993.1:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.972G>T
  hgvsp: ENSP00000472619.1:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.972G>T
  hgvsp: ENSP00000439681.1:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1065G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.972G>T
  hgvsp: ENSP00000301096.3:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6717
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys324Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-53116849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116849
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116849
    reference: chr 19
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.969C>T
  hgvsp: ENST00000545872.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1026C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.969C>T
  hgvsp: ENST00000536937.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.969C>T
  hgvsp: ENST00000597597.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.969C>T
  hgvsp: ENST00000541777.2:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.969C>T
  hgvsp: ENST00000544146.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5340C>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.885C>T
  hgvsp: ENST00000391789.4:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.969C>T
  hgvsp: ENST00000301096.3:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1062C>T
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly323Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-53116849-GCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTATGAATTCTCCAGTGATTTACTAGGGATGACTTGTGACTGAAGACCTTGCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116849
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116681
    reference: chr 19
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_acceptor_variant
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsp: ENSP00000375666.4:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His271_Phe326del
  variant of: http://identifiers.org/hgnc/13158
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTATGAATTCTCCAGTGATTTACTAGGGATGACTTGTGACTGAAGACCTTGCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

19-53116851-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116851
    reference: chr 19
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.967G>C
  hgvsp: ENSP00000472619.1:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.967G>C
  hgvsp: ENSP00000439681.1:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.967G>C
  hgvsp: ENSP00000445470.1:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5338G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.967G>C
  hgvsp: ENSP00000445993.1:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1024G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1060G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.967G>C
  hgvsp: ENSP00000440713.1:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.883G>C
  hgvsp: ENSP00000375666.4:p.Gly295Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.967G>C
  hgvsp: ENSP00000301096.3:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly323Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-53116855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116855
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116855
    reference: chr 19
allele count: 1
allele frequency: 8.707464038173523e-6
allele num: 114844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1020G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.879G>A
  hgvsp: ENST00000391789.4:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.963G>A
  hgvsp: ENST00000544146.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.963G>A
  hgvsp: ENST00000541777.2:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.963G>A
  hgvsp: ENST00000536937.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.963G>A
  hgvsp: ENST00000301096.3:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.963G>A
  hgvsp: ENST00000545872.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1056G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.963G>A
  hgvsp: ENST00000597597.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5334G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu321Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

19-53116856-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116856
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116856
    reference: chr 19
allele count: 1
allele frequency: 8.671973914702464e-6
allele num: 115314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5333A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1055A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.962A>T
  hgvsp: ENSP00000472619.1:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.962A>T
  hgvsp: ENSP00000445470.1:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.962A>T
  hgvsp: ENSP00000440713.1:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.962A>T
  hgvsp: ENSP00000439681.1:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1019A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.962A>T
  hgvsp: ENSP00000301096.3:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.962A>T
  hgvsp: ENSP00000445993.1:p.Glu321Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.878A>T
  hgvsp: ENSP00000375666.4:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu321Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

19-53116863-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116863
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116863
    reference: chr 19
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5326T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1048T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.871T>C
  hgvsp: ENSP00000375666.4:p.Cys291Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.955T>C
  hgvsp: ENSP00000440713.1:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.955T>C
  hgvsp: ENSP00000445993.1:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.955T>C
  hgvsp: ENSP00000439681.1:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.955T>C
  hgvsp: ENSP00000472619.1:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.955T>C
  hgvsp: ENSP00000445470.1:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1012T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.955T>C
  hgvsp: ENSP00000301096.3:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys319Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-53116865-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116865
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116865
    reference: chr 19
allele count: 1
allele frequency: 8.989410474461085e-6
allele num: 111242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.953A>G
  hgvsp: ENSP00000445993.1:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.953A>G
  hgvsp: ENSP00000301096.3:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.953A>G
  hgvsp: ENSP00000440713.1:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1046A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.953A>G
  hgvsp: ENSP00000445470.1:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1010A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.953A>G
  hgvsp: ENSP00000439681.1:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.869A>G
  hgvsp: ENSP00000375666.4:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.953A>G
  hgvsp: ENSP00000472619.1:p.Lys318Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5324A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26404
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5816
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys318Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

19-53116867-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116867
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116867
    reference: chr 19
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.951C>G
  hgvsp: ENSP00000445993.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1008C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.951C>G
  hgvsp: ENSP00000440713.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.867C>G
  hgvsp: ENSP00000375666.4:p.Tyr289Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.951C>G
  hgvsp: ENSP00000439681.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1044C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.951C>G
  hgvsp: ENSP00000301096.3:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.951C>G
  hgvsp: ENSP00000445470.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5322C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.951C>G
  hgvsp: ENSP00000472619.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr317Ter
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

19-53116869-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116869
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116869
    reference: chr 19
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.949T>C
  hgvsp: ENSP00000439681.1:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.949T>C
  hgvsp: ENSP00000472619.1:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1006T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5320T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.949T>C
  hgvsp: ENSP00000440713.1:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.949T>C
  hgvsp: ENSP00000301096.3:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.949T>C
  hgvsp: ENSP00000445993.1:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.949T>C
  hgvsp: ENSP00000445470.1:p.Tyr317His
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1042T>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.865T>C
  hgvsp: ENSP00000375666.4:p.Tyr289His
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr317His
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

19-53116872-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116872
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116872
    reference: chr 19
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.862C>A
  hgvsp: ENSP00000375666.4:p.Pro288Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.946C>A
  hgvsp: ENSP00000440713.1:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1039C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*1003C>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.946C>A
  hgvsp: ENSP00000439681.1:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.946C>A
  hgvsp: ENSP00000445470.1:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.946C>A
  hgvsp: ENSP00000472619.1:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.946C>A
  hgvsp: ENSP00000301096.3:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.946C>A
  hgvsp: ENSP00000445993.1:p.Pro316Thr
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5317C>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6004
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro316Thr
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

19-53116890-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116890
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116890
    reference: chr 19
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.928A>G
  hgvsp: ENSP00000445470.1:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.928A>G
  hgvsp: ENSP00000440713.1:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.844A>G
  hgvsp: ENSP00000375666.4:p.Ile282Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5299A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.928A>G
  hgvsp: ENSP00000439681.1:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.928A>G
  hgvsp: ENSP00000301096.3:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.928A>G
  hgvsp: ENSP00000445993.1:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*985A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.928A>G
  hgvsp: ENSP00000472619.1:p.Ile310Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1021A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26708
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile310Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-53116892-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116892
    reference: chr 19
allele count: 7
allele frequency: 5.805178218971322e-5
allele num: 120582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.842G>T
  hgvsp: ENSP00000375666.4:p.Arg281Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.926G>T
  hgvsp: ENSP00000301096.3:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.926G>T
  hgvsp: ENSP00000445470.1:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1019G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.926G>T
  hgvsp: ENSP00000439681.1:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5297G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*983G>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.926G>T
  hgvsp: ENSP00000440713.1:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.926G>T
  hgvsp: ENSP00000445993.1:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.926G>T
  hgvsp: ENSP00000472619.1:p.Arg309Ile
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg309Ile
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

19-53116905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116905
    reference: chr 19
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.913G>A
  hgvsp: ENSP00000439681.1:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5284G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.913G>A
  hgvsp: ENSP00000440713.1:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.913G>A
  hgvsp: ENSP00000472619.1:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.913G>A
  hgvsp: ENSP00000445993.1:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.913G>A
  hgvsp: ENSP00000445470.1:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+1006G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.829G>A
  hgvsp: ENSP00000375666.4:p.Val277Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.913G>A
  hgvsp: ENSP00000301096.3:p.Val305Ile
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*970G>A
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15677
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val305Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD

19-53116918-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116918
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116918
    reference: chr 19
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.900C>G
  hgvsp: ENSP00000445993.1:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*957C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.816C>G
  hgvsp: ENSP00000375666.4:p.His272Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5271C>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.900C>G
  hgvsp: ENSP00000445470.1:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.900C>G
  hgvsp: ENSP00000439681.1:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.900C>G
  hgvsp: ENSP00000472619.1:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.900C>G
  hgvsp: ENSP00000440713.1:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.900C>G
  hgvsp: ENSP00000301096.3:p.His300Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+993C>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6069
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His300Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-53116926-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116926
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116926
    reference: chr 19
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.892T>G
  hgvsp: ENSP00000440713.1:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.892T>G
  hgvsp: ENSP00000439681.1:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.892T>G
  hgvsp: ENSP00000445993.1:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5263T>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+985T>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.892T>G
  hgvsp: ENSP00000445470.1:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*949T>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.808T>G
  hgvsp: ENSP00000375666.4:p.Phe270Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.892T>G
  hgvsp: ENSP00000301096.3:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.892T>G
  hgvsp: ENSP00000472619.1:p.Phe298Val
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe298Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

19-53116933-GCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116933
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116849
    reference: chr 19
allele count: 26013
allele frequency: 2.146747652136597e-1
allele num: 121174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: false
consequence: splice donor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.75e1
  variant carriers: 478
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 8.25e1
  variant carriers: 555
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16417
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19127
  bin: 9.75e1
  variant carriers: 18432
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 3.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 3.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.75e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.25e1
  variant carriers: 587
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 630
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 6.25e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.25e1
  variant carriers: 499
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 384
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 9.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 13
num of homozygotes: 3409
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: GCCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

19-53116937-CACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116937
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116875
    reference: chr 19
allele count: 4
allele frequency: 3.994726960412256e-5
allele num: 100132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.Ile273MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile273MetfsTer27
num of homozygotes: 1
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: CACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAA
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

19-53116938-ACTCAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116938
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116933
    reference: chr 19
allele count: 14
allele frequency: 1.591596371160274e-4
allele num: 87962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.875_879delATGAG
  hgvsp: ENSP00000301096.3:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.875_879delATGAG
  hgvsp: ENSP00000445470.1:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*932_*936delATGAG
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.875_879delATGAG
  hgvsp: ENSP00000440713.1:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5246_142+5250delATGAG
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.875_879delATGAG
  hgvsp: ENSP00000472619.1:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.875_879delATGAG
  hgvsp: ENSP00000445993.1:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.875_879delATGAG
  hgvsp: ENSP00000439681.1:p.Asn292MetfsTer27
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-14_805-10delATGAG
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+968_282+972delATGAG
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn292MetfsTer27
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: ACTCAT
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-53116939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116939
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116939
    reference: chr 19
allele count: 4
allele frequency: 5.226162167812067e-5
allele num: 76538
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.879G>A
  hgvsp: ENST00000597597.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.879G>A
  hgvsp: ENST00000301096.3:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5250G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-10G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+972G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.879G>A
  hgvsp: ENST00000536937.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.879G>A
  hgvsp: ENST00000544146.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.879G>A
  hgvsp: ENST00000545872.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*936G>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.879G>A
  hgvsp: ENST00000541777.2:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18891
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu293Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-53116939-CTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTTCCACAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116939
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116855
    reference: chr 19
allele count: 2
allele frequency: 2.613081083906034e-5
allele num: 76538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.His271_Phe298del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: false
consequence: splice donor
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: CTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTTCCACAT
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-53116940-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116940
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116940
    reference: chr 19
allele count: 4
allele frequency: 4.621178862727882e-5
allele num: 86558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5249A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*935A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.878A>T
  hgvsp: ENSP00000301096.3:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.878A>T
  hgvsp: ENSP00000472619.1:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-11A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.878A>T
  hgvsp: ENSP00000440713.1:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+971A>T
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.878A>T
  hgvsp: ENSP00000445993.1:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.878A>T
  hgvsp: ENSP00000445470.1:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.878A>T
  hgvsp: ENSP00000439681.1:p.Glu293Val
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16545
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu293Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-53116940-TCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTTCCACATA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116940
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116856
    reference: chr 19
allele count: 1
allele frequency: 1.15529471568197e-5
allele num: 86558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsp: ENSP00000440713.1:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsp: ENSP00000472619.1:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsp: ENSP00000445470.1:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsp: ENSP00000445993.1:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsp: ENSP00000301096.3:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsp: ENSP00000439681.1:p.Val265_Asn292del
  variant of: http://identifiers.org/hgnc/13158
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: TCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTTCCACATA
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-53116941-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116941
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116941
    reference: chr 19
allele count: 1
allele frequency: 1.263072803516395e-5
allele num: 79172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5248G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.877G>C
  hgvsp: ENSP00000439681.1:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+970G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.877G>C
  hgvsp: ENSP00000445470.1:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.877G>C
  hgvsp: ENSP00000445993.1:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*934G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-12G>C
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.877G>C
  hgvsp: ENSP00000301096.3:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.877G>C
  hgvsp: ENSP00000440713.1:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.877G>C
  hgvsp: ENSP00000472619.1:p.Glu293Gln
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu293Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

19-53116941-CATTACATTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116941
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116932
    reference: chr 19
allele count: 2
allele frequency: 2.526145607032789e-5
allele num: 79172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.868_876delAAATGTAAT
  hgvsp: ENSP00000440713.1:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.868_876delAAATGTAAT
  hgvsp: ENSP00000445993.1:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.868_876delAAATGTAAT
  hgvsp: ENSP00000439681.1:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.868_876delAAATGTAAT
  hgvsp: ENSP00000301096.3:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.868_876delAAATGTAAT
  hgvsp: ENSP00000445470.1:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.868_876delAAATGTAAT
  hgvsp: ENSP00000472619.1:p.Lys290_Asn292del
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys290_Asn292del
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: CATTACATTT
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-53116942-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116942
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116942
    reference: chr 19
allele count: 2
allele frequency: 2.114835571534313e-5
allele num: 94570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.876T>A
  hgvsp: ENSP00000445993.1:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.876T>A
  hgvsp: ENSP00000301096.3:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5247T>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.876T>A
  hgvsp: ENSP00000439681.1:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+969T>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.876T>A
  hgvsp: ENSP00000472619.1:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.876T>A
  hgvsp: ENSP00000440713.1:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*933T>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-13T>A
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.876T>A
  hgvsp: ENSP00000445470.1:p.Asn292Lys
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn292Lys
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

19-53116944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116944
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116944
    reference: chr 19
allele count: 3
allele frequency: 3.16622691292876e-5
allele num: 94750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5245A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.874A>G
  hgvsp: ENSP00000439681.1:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.874A>G
  hgvsp: ENSP00000301096.3:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.874A>G
  hgvsp: ENSP00000472619.1:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+967A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*931A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.874A>G
  hgvsp: ENSP00000440713.1:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.874A>G
  hgvsp: ENSP00000445470.1:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.874A>G
  hgvsp: ENSP00000445993.1:p.Asn292Asp
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-15A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn292Asp
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

19-53116946-C-CAGAATCCAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116946
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116955
    reference: chr 19
allele count: 1
allele frequency: 1.003109639883639e-5
allele num: 99690
alternate allele: CAGAATCCAT
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.871_872insATGGATTCT
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3957
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys290_Cys291insTyrGlyPhe
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

19-53116949-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53116949
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 53116949
    reference: chr 19
allele count: 9
allele frequency: 1.152044238498758e-4
allele num: 78122
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472619
  ensembl transcript: ENST00000597597
  gene symbol: ZNF83
  hgvsc: ENST00000597597.1:c.869A>G
  hgvsp: ENSP00000472619.1:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000440713
  ensembl transcript: ENST00000545872
  gene symbol: ZNF83
  hgvsc: ENST00000545872.1:c.869A>G
  hgvsp: ENSP00000440713.1:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000375666
  ensembl transcript: ENST00000391789
  gene symbol: ZNF83
  hgvsc: ENST00000391789.4:c.805-20A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445470
  ensembl transcript: ENST00000544146
  gene symbol: ZNF83
  hgvsc: ENST00000544146.1:c.869A>G
  hgvsp: ENSP00000445470.1:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000301096
  ensembl transcript: ENST00000301096
  gene symbol: ZNF83
  hgvsc: ENST00000301096.3:c.869A>G
  hgvsp: ENSP00000301096.3:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472147
  ensembl transcript: ENST00000594682
  gene symbol: ZNF83
  hgvsc: ENST00000594682.2:c.*926A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000472392
  ensembl transcript: ENST00000600714
  gene symbol: ZNF83
  hgvsc: ENST00000600714.1:c.282+962A>G
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000445993
  ensembl transcript: ENST00000536937
  gene symbol: ZNF83
  hgvsc: ENST00000536937.1:c.869A>G
  hgvsp: ENSP00000445993.1:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000439681
  ensembl transcript: ENST00000541777
  gene symbol: ZNF83
  hgvsc: ENST00000541777.2:c.869A>G
  hgvsp: ENSP00000439681.1:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13158
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167766
  ensembl protein: ENSP00000471703
  ensembl transcript: ENST00000601257
  gene symbol: ZNF83
  hgvsc: ENST00000601257.1:c.142+5240A>G
  variant of: http://identifiers.org/hgnc/13158
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys290Arg
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29992
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11548
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.888e1

QD
type: SiteQuality
SIO_000300: 1.02e1

DP
type: SiteQuality
SIO_000300: 2.066915e6

FS
type: SiteQuality
SIO_000300: 2.962e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.173e0

VQSLOD
type: SiteQuality
SIO_000300: -3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11555
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

DP
type: SiteQuality
SIO_000300: 2.068154e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
all individuals: 1347
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30062
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11534
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.264e0

DP
type: SiteQuality
SIO_000300: 2.067659e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.821e0

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

FS
type: SiteQuality
SIO_000300: 1.118e0

VQSLOD
type: SiteQuality
SIO_000300: -1.183e0

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

GenotypeQuality
all individuals: 6849
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11551
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3522
bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
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InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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MQRankSum
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SIO_000300: -1.28e0

QD
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MQ
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SIO_000300: 5.962e1

ClippingRankSum
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VQSLOD
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FS
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SIO_000300: 3.606e0

DP
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SIO_000300: 2.068854e6

ReadPosRankSum
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SIO_000300: 1.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
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SIO_000300: -4.28e-1

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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SIO_000300: 2.069517e6

FS
type: SiteQuality
SIO_000300: 6.549e0

VQSLOD
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SIO_000300: -1.416e0

QD
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SIO_000300: 1.665e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
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Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

QD
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SIO_000300: 1.365e1

MQ
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SIO_000300: 5.93e1

FS
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: 6.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 5.25e0

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.52e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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SIO_000300: 2.08044e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 100

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 9.134615384615385e-3
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

Latino
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allele frequency: 4.318535152876144e-4
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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MQRankSum
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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European (Non-Finnish)
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East Asian
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allele num: 8654
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European (Finnish)
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Other
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South Asian
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FS
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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allele num: 6614
num of homozygotes: 0

Other
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South Asian
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African
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Latino
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allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66728
num of homozygotes: 0

East Asian
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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European (Finnish)
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FS
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DP
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QD
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ReadPosRankSum
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SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.572e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 9.6239e1

DP
type: SiteQuality
SIO_000300: 2.075481e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.446e0

VQSLOD
type: SiteQuality
SIO_000300: -1.178e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

QD
type: SiteQuality
SIO_000300: 3.6e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.178e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

FS
type: SiteQuality
SIO_000300: 9.6239e1

MQRankSum
type: SiteQuality
SIO_000300: -4.446e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

MQ
type: SiteQuality
SIO_000300: 5.572e1

QD
type: SiteQuality
SIO_000300: 3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 2.075481e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.545e1

MQRankSum
type: SiteQuality
SIO_000300: -4.446e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.901e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e-1

DP
type: SiteQuality
SIO_000300: 2.075597e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.6132e1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30113
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.801e1

VQSLOD
type: SiteQuality
SIO_000300: -2.464e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e0

FS
type: SiteQuality
SIO_000300: 1.0977e1

QD
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.92e-1

DP
type: SiteQuality
SIO_000300: 2.075645e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

GenotypeQuality
all individuals: 11625
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2696
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.030670384289005e-4
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.482e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.525e1

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-2

DP
type: SiteQuality
SIO_000300: 2.075859e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21300339640951e-4
allele num: 16488
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.947e0

VQSLOD
type: SiteQuality
SIO_000300: 9.79e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 2.075987e6

FS
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

GenotypeQuality
all individuals: 2870
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11627
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.757e0

QD
type: SiteQuality
SIO_000300: 1.528e1

DP
type: SiteQuality
SIO_000300: 2.07593e6

FS
type: SiteQuality
SIO_000300: 2.155e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11801
bin: 9.75e1
variant carriers: 234

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 212
allele frequency: 3.176696235914649e-3
allele num: 66736
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.209555488358028e-3
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.698229407236335e-4
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

QD
type: SiteQuality
SIO_000300: 1.597e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
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SIO_000300: 2.098654e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925298421255295e-4
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.36e-1

MQ
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SIO_000300: 5.827e1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
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SIO_000300: 2.081926e6

ClippingRankSum
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SIO_000300: -8.3e-2

FS
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
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SIO_000300: -9.71e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 2.081463e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.296e-1

FS
type: SiteQuality
SIO_000300: 2.774e0

QD
type: SiteQuality
SIO_000300: 1.513e1

MQRankSum
type: SiteQuality
SIO_000300: 8.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.891e1

DP
type: SiteQuality
SIO_000300: 2.081387e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.146e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.092e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 2.081203e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: -9.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.02e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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InbreedingCoeff
type: SiteQuality
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FS
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QD
type: SiteQuality
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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DP
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FS
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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DP
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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SIO_000300: 2.449e0

MQRankSum
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SIO_000300: -6.18e-1

ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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East Asian
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Other
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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DP
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
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allele num: 10380
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
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DP
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SIO_000300: 2.081792e6

InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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Other
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East Asian
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allele num: 8654
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
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MQ
type: SiteQuality
SIO_000300: 5.816e1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 4.496133325340207e-5
allele num: 66724
num of homozygotes: 0

African
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Other
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East Asian
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European (Finnish)
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Latino
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South Asian
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QD
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DP
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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Other
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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DP
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MQ
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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African
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VQSLOD
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

Latino
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allele count: 26
allele frequency: 2.245638279495595e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 642
allele frequency: 6.188548293811452e-2
allele num: 10374
num of homozygotes: 21

South Asian
type: Population
allele count: 3
allele frequency: 1.817300702689605e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.348637875745497e-4
allele num: 66734
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.358e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 2.142579e6

VQSLOD
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SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 5.856e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.418e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.31e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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SIO_000300: -1.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

ReadPosRankSum
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SIO_000300: -1.5e-2

BaseQRankSum
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SIO_000300: -1.214e0

InbreedingCoeff
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SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.659e1

FS
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SIO_000300: 0.0e0

QD
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SIO_000300: 1.382e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

DP
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SIO_000300: 2.096484e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.659e1

QD
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SIO_000300: 1.382e1

ClippingRankSum
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SIO_000300: -2.4e-1

FS
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.096484e6

BaseQRankSum
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SIO_000300: -1.214e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.379e1

MQRankSum
type: SiteQuality
SIO_000300: -1.356e0

DP
type: SiteQuality
SIO_000300: 2.096494e6

FS
type: SiteQuality
SIO_000300: 5.136e0

VQSLOD
type: SiteQuality
SIO_000300: -2.466e0

MQ
type: SiteQuality
SIO_000300: 5.853e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.108e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
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FS
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QD
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MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.93e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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MQ
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VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 8.63e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
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African
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele count: 0
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Latino
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allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

African
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.000390050706592e-5
allele num: 66658
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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FS
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 4.38e-1

DP
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VQSLOD
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InbreedingCoeff
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SIO_000300: 8.9e-3

MQRankSum
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MQ
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ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11528
num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66658
num of homozygotes: 0

Other
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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DP
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele num: 15384
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East Asian
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allele frequency: 0.0e0
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African
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QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -9.8e-3

VQSLOD
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MQ
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SIO_000300: 5.595e1

ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
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DP
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SIO_000300: 2.524214e6

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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East Asian
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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Other
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Other
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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DP
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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Other
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East Asian
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African
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 2.403084e6

FS
type: SiteQuality
SIO_000300: 1.075e0

QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

GenotypeQuality
all individuals: 3158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16432
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.207e0

FS
type: SiteQuality
SIO_000300: 3.21e0

DP
type: SiteQuality
SIO_000300: 2.402781e6

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.889e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
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GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16420
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

VQSLOD
type: SiteQuality
SIO_000300: -2.181e0

FS
type: SiteQuality
SIO_000300: 5.066e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

DP
type: SiteQuality
SIO_000300: 2.405079e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

QD
type: SiteQuality
SIO_000300: 2.586e1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 2648
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3196
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 15572
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 6020
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26701
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.517214421024145e-5
allele num: 66514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.767e0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

MQ
type: SiteQuality
SIO_000300: 5.679e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

QD
type: SiteQuality
SIO_000300: 2.055e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 1.103e0

DP
type: SiteQuality
SIO_000300: 2.376781e6

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 6072
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.912e0

FS
type: SiteQuality
SIO_000300: 9.65e-1

DP
type: SiteQuality
SIO_000300: 2.368835e6

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26540
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variant carriers: 0

GenotypeQuality
all individuals: 15655
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 2685
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variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.311e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 4.193e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.89e-1

QD
type: SiteQuality
SIO_000300: 1.522e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.223e0

DP
type: SiteQuality
SIO_000300: 2.366614e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.66e1

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 2668
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variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.631e1

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

DP
type: SiteQuality
SIO_000300: 2.366676e6

QD
type: SiteQuality
SIO_000300: 1.181e1

FS
type: SiteQuality
SIO_000300: 4.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: -1.165e0

GenotypeQuality
all individuals: 2003
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 13

GenotypeQuality
all individuals: 3881
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1550
bin: 8.25e1
variant carriers: 13

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 18

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 15

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 14

GenotypeQuality
all individuals: 228
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 888
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variant carriers: 21

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 12

GenotypeQuality
all individuals: 29990
bin: 9.75e1
variant carriers: 22390

GenotypeQuality
all individuals: 18793
bin: 6.25e1
variant carriers: 11

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1641
bin: 7.25e1
variant carriers: 10

Latino
type: Population
allele count: 6022
allele frequency: 5.218370883882149e-1
allele num: 11540
num of homozygotes: 1508

South Asian
type: Population
allele count: 1985
allele frequency: 1.202156007751938e-1
allele num: 16512
num of homozygotes: 123

European (Finnish)
type: Population
allele count: 1476
allele frequency: 2.235009085402786e-1
allele num: 6604
num of homozygotes: 133

African
type: Population
allele count: 1482
allele frequency: 1.434378629500581e-1
allele num: 10332
num of homozygotes: 80

Other
type: Population
allele count: 183
allele frequency: 2.024336283185841e-1
allele num: 904
num of homozygotes: 21

East Asian
type: Population
allele count: 3987
allele frequency: 4.629586623316303e-1
allele num: 8612
num of homozygotes: 825

European (Non-Finnish)
type: Population
allele count: 10878
allele frequency: 1.631618419079046e-1
allele num: 66670
num of homozygotes: 719

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.982e0

DP
type: SiteQuality
SIO_000300: 4.715878e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.47e-2

QD
type: SiteQuality
SIO_000300: 4.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.89e0

FS
type: SiteQuality
SIO_000300: 1.918e0

MQ
type: SiteQuality
SIO_000300: 5.593e1

VQSLOD
type: SiteQuality
SIO_000300: -1.032e0

GenotypeQuality
all individuals: 281
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
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GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.25e1
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 17855
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 118
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GenotypeQuality
all individuals: 253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3977
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.206044562100154e-4
allele num: 9066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.475238922675934e-5
allele num: 57550
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 3.168702e6

FS
type: SiteQuality
SIO_000300: 1.918e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.836e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

MQRankSum
type: SiteQuality
SIO_000300: -5.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

QD
type: SiteQuality
SIO_000300: 6.1e-1

MQ
type: SiteQuality
SIO_000300: 5.603e1

GenotypeQuality
all individuals: 12688
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 2.981260647359455e-3
allele num: 4696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51854
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.456e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.764e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

FS
type: SiteQuality
SIO_000300: 1.911e0

MQ
type: SiteQuality
SIO_000300: 5.581e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.165e0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 2.197065e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2710
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.3598041881969e-4
allele num: 7354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.048582995951417e-4
allele num: 2470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.299041313787025e-5
allele num: 46522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.911e0

DP
type: SiteQuality
SIO_000300: 1.354729e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.290000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

MQ
type: SiteQuality
SIO_000300: 4.598e1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.83e-1

QD
type: SiteQuality
SIO_000300: 3.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 864
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variant carriers: 0

GenotypeQuality
all individuals: 8162
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.3598041881969e-4
allele num: 7354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.149520656893513e-5
allele num: 46522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

MQ
type: SiteQuality
SIO_000300: 4.598e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.290000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 1.911e0

QD
type: SiteQuality
SIO_000300: 3.97e0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.354729e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.83e-1

GenotypeQuality
all individuals: 1015
bin: 9.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13750
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.621919244887258e-4
allele num: 3814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.233045622688039e-4
allele num: 8110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.910221318526629e-5
allele num: 51148
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.149e0

MQ
type: SiteQuality
SIO_000300: 4.008e1

DP
type: SiteQuality
SIO_000300: 2.139041e6

FS
type: SiteQuality
SIO_000300: 1.918e0

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.381e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 5.22e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.955110659263314e-5
allele num: 51148
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

DP
type: SiteQuality
SIO_000300: 2.139041e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.149e0

MQ
type: SiteQuality
SIO_000300: 4.008e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.381e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.22e0

FS
type: SiteQuality
SIO_000300: 1.918e0

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089602139752591e-5
allele num: 47856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13084
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.494e0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.905e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.093e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.179204279505182e-5
allele num: 47856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.905e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.918e0

MQ
type: SiteQuality
SIO_000300: 5.093e1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

DP
type: SiteQuality
SIO_000300: 1.515174e6

QD
type: SiteQuality
SIO_000300: 5.68e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 882
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GenotypeQuality
all individuals: 1672
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.633192849876471e-5
allele num: 55048
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.669e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.356e1

FS
type: SiteQuality
SIO_000300: 1.918e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.242e1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e0

DP
type: SiteQuality
SIO_000300: 2.744628e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.348e0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.632137149498765e-5
allele num: 55064
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5058
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.685203909673071e-4
allele num: 5934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8736
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.082e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.436e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 1.918e0

VQSLOD
type: SiteQuality
SIO_000300: 3.367e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.415e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.436e0

DP
type: SiteQuality
SIO_000300: 2.758249e6

MQ
type: SiteQuality
SIO_000300: 5.195e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17712
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.448016217781639e-4
allele num: 6906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.918e0

DP
type: SiteQuality
SIO_000300: 3.160164e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 4.89e0

MQ
type: SiteQuality
SIO_000300: 3.235e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.760999999999999e-1

QD
type: SiteQuality
SIO_000300: 8.83e0