22-26906158-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906158
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906158
    reference: chr 22
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.81T>C
  hgvsp: ENST00000420242.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.81T>C
  hgvsp: ENST00000407431.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.252T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.81T>C
  hgvsp: ENST00000407148.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.81T>C
  hgvsp: ENST00000418876.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.81T>C
  hgvsp: ENST00000405938.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.365T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.81T>C
  hgvsp: ENST00000440258.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.81T>C
  hgvsp: ENST00000407690.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.81T>C
  hgvsp: ENST00000455080.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr27Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

22-26906159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906159
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906159
    reference: chr 22
allele count: 7
allele frequency: 5.765587678115476e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.80C>T
  hgvsp: ENSP00000385861.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.80C>T
  hgvsp: ENSP00000411840.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.80C>T
  hgvsp: ENSP00000383892.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.80C>T
  hgvsp: ENSP00000397475.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.80C>T
  hgvsp: ENSP00000384421.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.80C>T
  hgvsp: ENSP00000399347.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.80C>T
  hgvsp: ENSP00000404973.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.80C>T
  hgvsp: ENSP00000384297.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.364C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.251C>T
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr27Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

22-26906167-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906167
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906167
    reference: chr 22
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.72T>C
  hgvsp: ENST00000420242.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.72T>C
  hgvsp: ENST00000407690.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.72T>C
  hgvsp: ENST00000407431.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.72T>C
  hgvsp: ENST00000405938.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.72T>C
  hgvsp: ENST00000407148.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.72T>C
  hgvsp: ENST00000418876.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.72T>C
  hgvsp: ENST00000455080.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.356T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.72T>C
  hgvsp: ENST00000440258.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.243T>C
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe24Phe
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-26906178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906178
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906178
    reference: chr 22
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.61C>T
  hgvsp: ENSP00000384421.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.61C>T
  hgvsp: ENSP00000384297.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.61C>T
  hgvsp: ENSP00000397475.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.61C>T
  hgvsp: ENSP00000411840.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.61C>T
  hgvsp: ENSP00000404973.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.345C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.61C>T
  hgvsp: ENSP00000385861.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.61C>T
  hgvsp: ENSP00000399347.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.61C>T
  hgvsp: ENSP00000383892.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.232C>T
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg21Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

22-26906178-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906178
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906178
    reference: chr 22
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.61C>G
  hgvsp: ENSP00000411840.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.61C>G
  hgvsp: ENSP00000384297.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.61C>G
  hgvsp: ENSP00000397475.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.61C>G
  hgvsp: ENSP00000399347.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.345C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.61C>G
  hgvsp: ENSP00000383892.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.61C>G
  hgvsp: ENSP00000404973.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.61C>G
  hgvsp: ENSP00000384421.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.61C>G
  hgvsp: ENSP00000385861.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.232C>G
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9268
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg21Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-26906182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906182
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906182
    reference: chr 22
allele count: 5
allele frequency: 4.119023297195769e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.57C>T
  hgvsp: ENST00000407431.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.57C>T
  hgvsp: ENST00000440258.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.57C>T
  hgvsp: ENST00000420242.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.57C>T
  hgvsp: ENST00000418876.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.57C>T
  hgvsp: ENST00000407148.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.57C>T
  hgvsp: ENST00000455080.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.57C>T
  hgvsp: ENST00000407690.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.57C>T
  hgvsp: ENST00000405938.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.228C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.341C>T
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp19Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

22-26906182-G-GTCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906182
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906185
    reference: chr 22
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: GTCA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.54_56dupTGA
  hgvsp: ENSP00000385861.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.54_56dupTGA
  hgvsp: ENSP00000384297.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.54_56dupTGA
  hgvsp: ENSP00000399347.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.225_227dupTGA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.338_340dupTGA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.54_56dupTGA
  hgvsp: ENSP00000384421.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.54_56dupTGA
  hgvsp: ENSP00000411840.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.54_56dupTGA
  hgvsp: ENSP00000397475.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.54_56dupTGA
  hgvsp: ENSP00000383892.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.54_56dupTGA
  hgvsp: ENSP00000404973.1:p.Asp19dup
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp19dup
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

22-26906182-G-GTCATCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906182
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906188
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: GTCATCA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.51_56dupTGATGA
  hgvsp: ENSP00000383892.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.51_56dupTGATGA
  hgvsp: ENSP00000399347.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.335_340dupTGATGA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.51_56dupTGATGA
  hgvsp: ENSP00000404973.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.51_56dupTGATGA
  hgvsp: ENSP00000397475.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.222_227dupTGATGA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.51_56dupTGATGA
  hgvsp: ENSP00000384421.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.51_56dupTGATGA
  hgvsp: ENSP00000411840.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.51_56dupTGATGA
  hgvsp: ENSP00000384297.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.51_56dupTGATGA
  hgvsp: ENSP00000385861.1:p.Asp18_Asp19dup
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp18_Asp19dup
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

22-26906182-GTCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906182
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906179
    reference: chr 22
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.54_56delTGA
  hgvsp: ENSP00000404973.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.54_56delTGA
  hgvsp: ENSP00000411840.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.54_56delTGA
  hgvsp: ENSP00000397475.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.54_56delTGA
  hgvsp: ENSP00000384297.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.54_56delTGA
  hgvsp: ENSP00000385861.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.54_56delTGA
  hgvsp: ENSP00000384421.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.225_227delTGA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.54_56delTGA
  hgvsp: ENSP00000399347.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.54_56delTGA
  hgvsp: ENSP00000383892.1:p.Asp19del
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.338_340delTGA
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp19del
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: GTCA
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

22-26906185-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906185
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906185
    reference: chr 22
allele count: 73
allele frequency: 6.015855487613931e-4
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.54T>C
  hgvsp: ENST00000405938.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.225T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.54T>C
  hgvsp: ENST00000407690.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.54T>C
  hgvsp: ENST00000418876.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.54T>C
  hgvsp: ENST00000455080.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.54T>C
  hgvsp: ENST00000407148.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.54T>C
  hgvsp: ENST00000407431.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.54T>C
  hgvsp: ENST00000440258.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.54T>C
  hgvsp: ENST00000420242.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.338T>C
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp18Asp
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

22-26906186-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906186
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906186
    reference: chr 22
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.224A>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.53A>G
  hgvsp: ENSP00000385861.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.53A>G
  hgvsp: ENSP00000383892.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.53A>G
  hgvsp: ENSP00000404973.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.53A>G
  hgvsp: ENSP00000397475.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.53A>G
  hgvsp: ENSP00000411840.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.53A>G
  hgvsp: ENSP00000384297.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.337A>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.53A>G
  hgvsp: ENSP00000384421.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.53A>G
  hgvsp: ENSP00000399347.1:p.Asp18Gly
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp18Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

22-26906199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906199
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906199
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.324A>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.40A>G
  hgvsp: ENSP00000404973.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.211A>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.40A>G
  hgvsp: ENSP00000384421.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.40A>G
  hgvsp: ENSP00000397475.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.40A>G
  hgvsp: ENSP00000385861.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.40A>G
  hgvsp: ENSP00000383892.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.40A>G
  hgvsp: ENSP00000399347.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.40A>G
  hgvsp: ENSP00000384297.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.40A>G
  hgvsp: ENSP00000411840.1:p.Ile14Val
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile14Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

22-26906201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906201
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906201
    reference: chr 22
allele count: 21
allele frequency: 1.730075299467796e-4
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.38G>A
  hgvsp: ENSP00000411840.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.38G>A
  hgvsp: ENSP00000384297.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.38G>A
  hgvsp: ENSP00000384421.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.38G>A
  hgvsp: ENSP00000385861.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.322G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.38G>A
  hgvsp: ENSP00000383892.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.38G>A
  hgvsp: ENSP00000397475.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.38G>A
  hgvsp: ENSP00000404973.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.209G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.38G>A
  hgvsp: ENSP00000399347.1:p.Arg13His
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg13His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

22-26906202-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906202
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906202
    reference: chr 22
allele count: 24
allele frequency: 1.977196335596125e-4
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.37C>T
  hgvsp: ENSP00000384421.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.37C>T
  hgvsp: ENSP00000385861.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.37C>T
  hgvsp: ENSP00000384297.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.37C>T
  hgvsp: ENSP00000383892.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.37C>T
  hgvsp: ENSP00000397475.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.37C>T
  hgvsp: ENSP00000411840.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.321C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.37C>T
  hgvsp: ENSP00000404973.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.37C>T
  hgvsp: ENSP00000399347.1:p.Arg13Cys
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.208C>T
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg13Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

22-26906202-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906202
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906202
    reference: chr 22
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.37C>G
  hgvsp: ENSP00000383892.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.37C>G
  hgvsp: ENSP00000384421.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.37C>G
  hgvsp: ENSP00000404973.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.37C>G
  hgvsp: ENSP00000399347.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.37C>G
  hgvsp: ENSP00000397475.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.37C>G
  hgvsp: ENSP00000385861.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.321C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.37C>G
  hgvsp: ENSP00000384297.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.208C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.37C>G
  hgvsp: ENSP00000411840.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14650
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg13Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS

22-26906216-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906216
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906216
    reference: chr 22
allele count: 757
allele frequency: 6.239799535106085e-3
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.23G>A
  hgvsp: ENSP00000384297.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.194G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.23G>A
  hgvsp: ENSP00000397475.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.23G>A
  hgvsp: ENSP00000384421.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.23G>A
  hgvsp: ENSP00000383892.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.23G>A
  hgvsp: ENSP00000404973.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.23G>A
  hgvsp: ENSP00000385861.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.307G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.23G>A
  hgvsp: ENSP00000399347.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.23G>A
  hgvsp: ENSP00000411840.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14520
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 29032
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg8Gln
num of homozygotes: 10
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum

22-26906217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906217
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906217
    reference: chr 22
allele count: 51
allele frequency: 4.204590423426988e-4
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.22C>T
  hgvsp: ENSP00000399347.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.22C>T
  hgvsp: ENSP00000404973.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.193C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.22C>T
  hgvsp: ENSP00000411840.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.22C>T
  hgvsp: ENSP00000397475.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.22C>T
  hgvsp: ENSP00000385861.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.22C>T
  hgvsp: ENSP00000384421.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.22C>T
  hgvsp: ENSP00000384297.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.306C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.22C>T
  hgvsp: ENSP00000383892.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10313
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 41415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 9.75e1
  variant carriers: 51
hgvs: p.Arg8Trp
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

22-26906226-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906226
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906226
    reference: chr 22
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.13C>G
  hgvsp: ENSP00000384297.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.13C>G
  hgvsp: ENSP00000411840.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.13C>G
  hgvsp: ENSP00000384421.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.184C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.13C>G
  hgvsp: ENSP00000383892.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.13C>G
  hgvsp: ENSP00000397475.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.13C>G
  hgvsp: ENSP00000385861.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.13C>G
  hgvsp: ENSP00000399347.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.13C>G
  hgvsp: ENSP00000404973.1:p.His5Asp
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.297C>G
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His5Asp
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

22-26906232-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906232
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906232
    reference: chr 22
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.7T>A
  hgvsp: ENSP00000399347.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.7T>A
  hgvsp: ENSP00000384297.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.7T>A
  hgvsp: ENSP00000397475.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.7T>A
  hgvsp: ENSP00000384421.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.7T>A
  hgvsp: ENSP00000404973.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.178T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.7T>A
  hgvsp: ENSP00000383892.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.7T>A
  hgvsp: ENSP00000411840.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.7T>A
  hgvsp: ENSP00000385861.1:p.Leu3Met
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.291T>A
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41237
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu3Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

22-26906233-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906233
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906233
    reference: chr 22
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.290A>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.6A>T
  hgvsp: ENST00000440258.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.177A>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.6A>T
  hgvsp: ENST00000455080.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.6A>T
  hgvsp: ENST00000407148.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.6A>T
  hgvsp: ENST00000407690.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.6A>T
  hgvsp: ENST00000405938.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.6A>T
  hgvsp: ENST00000407431.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.6A>T
  hgvsp: ENST00000418876.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.6A>T
  hgvsp: ENST00000420242.1:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser2Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

22-26906242-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906242
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906242
    reference: chr 22
allele count: 8
allele frequency: 6.627673852169734e-5
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.168G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.281G>A
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40519
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

22-26906253-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906253
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906253
    reference: chr 22
allele count: 1
allele frequency: 8.339309838717748e-6
allele num: 119914
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-6C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-6C>G
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13261
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
hgvs: c.-9-6C>G
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

22-26906264-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906264
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906264
    reference: chr 22
allele count: 2
allele frequency: 1.678838243935197e-5
allele num: 119130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-17T>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-17T>A
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34505
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-26906273-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906273
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906273
    reference: chr 22
allele count: 1
allele frequency: 8.457088731774973e-6
allele num: 118244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-26T>C
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23538
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

22-26906277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906277
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906277
    reference: chr 22
allele count: 2
allele frequency: 1.700969552645008e-5
allele num: 117580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-30G>A
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-30G>A
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

22-26906278-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906278
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906278
    reference: chr 22
allele count: 3
allele frequency: 2.572192880170108e-5
allele num: 116632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-31C>T
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

22-26906278-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906278
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906279
    reference: chr 22
allele count: 1
allele frequency: 8.573976267233693e-6
allele num: 116632
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-32dupA
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18231
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

22-26906282-G-GTCCTGGGGGCAGCAGTCGAAGGAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906282
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906306
    reference: chr 22
allele count: 1
allele frequency: 8.561204047737274e-6
allele num: 116806
alternate allele: GTCCTGGGGGCAGCAGTCGAAGGAT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

22-26906288-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26906288
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26906288
    reference: chr 22
allele count: 3
allele frequency: 2.609603340292276e-5
allele num: 114960
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000479489
  gene symbol: TFIP11
  hgvsc: ENST00000479489.1:n.276-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000399347
  ensembl transcript: ENST00000455080
  gene symbol: TFIP11
  hgvsc: ENST00000455080.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000385861
  ensembl transcript: ENST00000407148
  gene symbol: TFIP11
  hgvsc: ENST00000407148.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384421
  ensembl transcript: ENST00000407690
  gene symbol: TFIP11
  hgvsc: ENST00000407690.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000397475
  ensembl transcript: ENST00000420242
  gene symbol: TFIP11
  hgvsc: ENST00000420242.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000404973
  ensembl transcript: ENST00000418876
  gene symbol: TFIP11
  hgvsc: ENST00000418876.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000411840
  ensembl transcript: ENST00000440258
  gene symbol: TFIP11
  hgvsc: ENST00000440258.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl transcript: ENST00000472918
  gene symbol: TFIP11
  hgvsc: ENST00000472918.1:n.163-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000383892
  ensembl transcript: ENST00000407431
  gene symbol: TFIP11
  hgvsc: ENST00000407431.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100109
  ensembl protein: ENSP00000384297
  ensembl transcript: ENST00000405938
  gene symbol: TFIP11
  hgvsc: ENST00000405938.1:c.-9-41C>G
  variant of: http://identifiers.org/hgnc/17165
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14366
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

22-26924139-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924139
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924139
    reference: chr 22
allele count: 173
allele frequency: 7.664362927520822e-3
allele num: 22572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+41G>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+41G>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+41G>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31132
  bin: 2.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13581
  bin: 7.5e0
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 6.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 7032
  bin: 9.75e1
  variant carriers: 175
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6326
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 6031
  bin: 1.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4396
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22843
  bin: 7.5e0
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 5019
  bin: 2.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.25e1
  variant carriers: 7
num of homozygotes: 3
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

22-26924142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924142
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924142
    reference: chr 22
allele count: 3
allele frequency: 1.327316166710911e-4
allele num: 22602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+38C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+38C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+38C>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31053
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23526
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5666
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5609
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

22-26924149-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924149
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924149
    reference: chr 22
allele count: 6477
allele frequency: 2.715495555928224e-1
allele num: 23852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+31G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+31G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+31G>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16737
  bin: 7.5e0
  variant carriers: 6422
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.25e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 427
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 24970
  bin: 2.5e0
  variant carriers: 2473
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 453
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 2.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 420
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.25e1
  variant carriers: 1027
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 519
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 446
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 2.75e1
  variant carriers: 788
genotype quality: GenotypeQuality
  all individuals: 9396
  bin: 9.75e1
  variant carriers: 5841
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 16442
  bin: 7.5e0
  variant carriers: 968
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.25e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 8565
  bin: 2.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 9.25e1
  variant carriers: 399
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 1.25e1
  variant carriers: 841
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.25e1
  variant carriers: 465
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 6.25e1
  variant carriers: 607
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 8.75e1
  variant carriers: 407
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 5.75e1
  variant carriers: 412
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 1.75e1
  variant carriers: 1172
genotype quality: GenotypeQuality
  all individuals: 5445
  bin: 2.25e1
  variant carriers: 927
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 6.75e1
  variant carriers: 518
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 212
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 91
num of homozygotes: 871
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

22-26924150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924150
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924150
    reference: chr 22
allele count: 2
allele frequency: 8.61103935244984e-5
allele num: 23226
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+30C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+30C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+30C>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28843
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4813
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8983
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24177
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5074
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

22-26924153-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924153
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924153
    reference: chr 22
allele count: 3
allele frequency: 1.288438412643876e-4
allele num: 23284
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+27T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+27T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+27T>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16373
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6740
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-26924156-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924156
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924156
    reference: chr 22
allele count: 4
allele frequency: 1.71777033410633e-4
allele num: 23286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+24G>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+24G>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+24G>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16786
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4356
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24803
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6739
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

22-26924177-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924177
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924177
    reference: chr 22
allele count: 25
allele frequency: 1.054229569030952e-3
allele num: 23714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*7+3A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*7+3A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*7+3A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20565
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25732
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23838
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16795
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6749
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 6.25e1
  variant carriers: 4
hgvs: c.*7+3A>G
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

22-26924185-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924185
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924185
    reference: chr 22
allele count: 1
allele frequency: 4.178156597309267e-5
allele num: 23934
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.*2T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.*2T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.*2T>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23216
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18684
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6734
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

22-26924191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924191
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924191
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 24148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1130C>T
  hgvsp: ENSP00000381180.2:p.Ser377Leu
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1130C>T
  hgvsp: ENSP00000339813.4:p.Ser377Leu
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1130C>T
  hgvsp: ENSP00000385192.1:p.Ser377Leu
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22732
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23760
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19790
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22736
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser377Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

22-26924208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924208
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924208
    reference: chr 22
allele count: 1
allele frequency: 4.094333442515558e-5
allele num: 24424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1113C>T
  hgvsp: ENST00000403880.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1113C>T
  hgvsp: ENST00000398110.2:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1113C>T
  hgvsp: ENST00000338754.4:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 22968
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 58
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
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genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser371Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

22-26924217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924217
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924217
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 24478
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1104C>T
  hgvsp: ENST00000338754.4:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1104C>T
  hgvsp: ENST00000403880.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1104C>T
  hgvsp: ENST00000398110.2:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21192
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn368Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-26924217-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924217
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924217
    reference: chr 22
allele count: 1
allele frequency: 4.085301086690089e-5
allele num: 24478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1104C>G
  hgvsp: ENSP00000381180.2:p.Asn368Lys
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1104C>G
  hgvsp: ENSP00000339813.4:p.Asn368Lys
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1104C>G
  hgvsp: ENSP00000385192.1:p.Asn368Lys
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn368Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/22-26924241-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924241
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924241
    reference: chr 22
allele count: 1
allele frequency: 4.16181122024305e-5
allele num: 24028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-13T>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-13T>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-13T>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29021
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16367
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 236
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28008
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6734
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

22-26924247-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924247
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924244
    reference: chr 22
allele count: 1
allele frequency: 4.184450581638631e-5
allele num: 23898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-22_1093-20delTCT
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-22_1093-20delTCT
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-22_1093-20delTCT
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28895
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 596
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8
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genotype quality: GenotypeQuality
  all individuals: 228
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 486
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genotype quality: GenotypeQuality
  all individuals: 11739
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genotype quality: GenotypeQuality
  all individuals: 361
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1681
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 625
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: CAGA
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

22-26924250-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924250
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924250
    reference: chr 22
allele count: 1
allele frequency: 4.200974626113258e-5
allele num: 23804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-22T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-22T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-22T>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30439
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 2.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 625
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 167
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

22-26924251-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924251
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924251
    reference: chr 22
allele count: 1
allele frequency: 4.224043254202923e-5
allele num: 23674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-23T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-23T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-23T>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30761
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6732
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

22-26924262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924262
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924262
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 23210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-34G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-34G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-34G>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12327
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6459
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3629
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29099
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

22-26924274-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26924274
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26924274
    reference: chr 22
allele count: 7
allele frequency: 3.096523046978678e-4
allele num: 22606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1093-46C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1093-46C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1093-46C>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6734
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3355
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5824
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4482
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26506
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

22-26928613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928613
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928613
    reference: chr 22
allele count: 191
allele frequency: 1.581570971962307e-3
allele num: 120766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+48C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+48C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+48C>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19450
  bin: 9.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51085
  bin: 9.75e1
  variant carriers: 186
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 4
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

22-26928626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928626
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928626
    reference: chr 22
allele count: 1
allele frequency: 8.277049397430804e-6
allele num: 120816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+35T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+35T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+35T>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51055
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-26928632-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928632
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928632
    reference: chr 22
allele count: 1
allele frequency: 8.275131574592036e-6
allele num: 120844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+29T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+29T>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+29T>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51055
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

22-26928636-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928636
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928636
    reference: chr 22
allele count: 6
allele frequency: 4.964257347100873e-5
allele num: 120864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19363
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51056
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

22-26928642-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928642
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928641
    reference: chr 22
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+18delG
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+18delG
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+18delG
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19358
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51055
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: TC
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

22-26928647-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928647
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928647
    reference: chr 22
allele count: 1
allele frequency: 8.262687356435807e-6
allele num: 121026
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+14A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+14A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+14A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51054
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

22-26928651-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928651
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928651
    reference: chr 22
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51054
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

22-26928653-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928653
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928653
    reference: chr 22
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+8A>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+8A>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+8A>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5945
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51054
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1092+8A>T
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

22-26928656-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928656
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928656
    reference: chr 22
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1092+5G>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1092+5G>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1092+5G>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 26
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
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genotype quality: GenotypeQuality
  all individuals: 497
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genotype quality: GenotypeQuality
  all individuals: 215
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genotype quality: GenotypeQuality
  all individuals: 29
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genotype quality: GenotypeQuality
  all individuals: 5960
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genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1092+5G>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

22-26928676-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928676
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928676
    reference: chr 22
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1077G>A
  hgvsp: ENST00000398110.2:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1077G>A
  hgvsp: ENST00000403880.1:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1077G>A
  hgvsp: ENST00000338754.4:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 29
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
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genotype quality: GenotypeQuality
  all individuals: 6039
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genotype quality: GenotypeQuality
  all individuals: 600
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
  all individuals: 485
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51054
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu359Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

22-26928682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928682
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928682
    reference: chr 22
allele count: 7
allele frequency: 5.783307721541995e-5
allele num: 121038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1071C>G
  hgvsp: ENST00000398110.2:c.1071C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1071C>G
  hgvsp: ENST00000403880.1:c.1071C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1071C>G
  hgvsp: ENST00000338754.4:c.1071C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19356
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51054
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6022
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala357Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

22-26928688-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928688
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928688
    reference: chr 22
allele count: 181
allele frequency: 1.503047615884141e-3
allele num: 120422
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1065A>C
  hgvsp: ENST00000338754.4:c.1065A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1065A>C
  hgvsp: ENST00000403880.1:c.1065A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1065A>C
  hgvsp: ENST00000398110.2:c.1065A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19369
  bin: 9.75e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 491
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  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5965
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50548
  bin: 9.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 7.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 9.25e1
  variant carriers: 2
hgvs: p.Thr355Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

22-26928690-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928690
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928690
    reference: chr 22
allele count: 2
allele frequency: 1.653083827880912e-5
allele num: 120986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1063A>C
  hgvsp: ENSP00000385192.1:p.Thr355Pro
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1063A>C
  hgvsp: ENSP00000339813.4:p.Thr355Pro
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1063A>C
  hgvsp: ENSP00000381180.2:p.Thr355Pro
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19070
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51010
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6013
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr355Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

22-26928699-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928699
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928699
    reference: chr 22
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1054G>C
  hgvsp: ENSP00000385192.1:p.Asp352His
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1054G>C
  hgvsp: ENSP00000381180.2:p.Asp352His
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1054G>C
  hgvsp: ENSP00000339813.4:p.Asp352His
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51011
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp352His
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

22-26928699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928699
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928699
    reference: chr 22
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1054G>A
  hgvsp: ENSP00000339813.4:p.Asp352Asn
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1054G>A
  hgvsp: ENSP00000385192.1:p.Asp352Asn
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1054G>A
  hgvsp: ENSP00000381180.2:p.Asp352Asn
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19068
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51011
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp352Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD

22-26928700-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928700
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928700
    reference: chr 22
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1053G>A
  hgvsp: ENST00000338754.4:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1053G>A
  hgvsp: ENST00000398110.2:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1053G>A
  hgvsp: ENST00000403880.1:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19067
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5916
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly351Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS

22-26928731-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928731
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928731
    reference: chr 22
allele count: 8
allele frequency: 6.636250518457072e-5
allele num: 120550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-20T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-20T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-20T>C
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19066
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51010
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/22-26928733-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928733
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928733
    reference: chr 22
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-22T>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-22T>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-22T>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19062
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51008
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

22-26928740-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928740
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928740
    reference: chr 22
allele count: 1
allele frequency: 8.307027745472669e-6
allele num: 120380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-29A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-29A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-29A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19062
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51007
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

22-26928744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928744
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928744
    reference: chr 22
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-33C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-33C>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-33C>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19061
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

22-26928744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928744
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928744
    reference: chr 22
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-33C>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-33C>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-33C>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19061
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51007
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

22-26928749-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928749
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928749
    reference: chr 22
allele count: 7
allele frequency: 5.823433496389471e-5
allele num: 120204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-38A>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-38A>T
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-38A>T
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19060
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51006
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

22-26928749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26928749
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26928749
    reference: chr 22
allele count: 8
allele frequency: 6.655352567302252e-5
allele num: 120204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1042-38A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1042-38A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1042-38A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19060
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51006
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

22-26931994-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26931994
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26931994
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 8722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1041+260A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000403758
  ensembl transcript: ENST00000445720
  gene symbol: TPST2
  hgvsc: ENST00000445720.1:c.*35A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1041+260A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1041+260A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

22-26931998-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26931998
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26931998
    reference: chr 22
allele count: 1
allele frequency: 1.130965844831486e-4
allele num: 8842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1041+256T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1041+256T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1041+256T>C
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000403758
  ensembl transcript: ENST00000445720
  gene symbol: TPST2
  hgvsc: ENST00000445720.1:c.*31T>C
  variant of: http://identifiers.org/hgnc/12021
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4638
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

22-26932000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26932000
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26932000
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 8942
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000385192
  ensembl transcript: ENST00000403880
  gene symbol: TPST2
  hgvsc: ENST00000403880.1:c.1041+254A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000339813
  ensembl transcript: ENST00000338754
  gene symbol: TPST2
  hgvsc: ENST00000338754.4:c.1041+254A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000403758
  ensembl transcript: ENST00000445720
  gene symbol: TPST2
  hgvsc: ENST00000445720.1:c.*29A>G
  variant of: http://identifiers.org/hgnc/12021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128294
  ensembl protein: ENSP00000381180
  ensembl transcript: ENST00000398110
  gene symbol: TPST2
  hgvsc: ENST00000398110.2:c.1041+254A>G
  variant of: http://identifiers.org/hgnc/12021
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40999
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.768268e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.872e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.932e0

FS
type: SiteQuality
SIO_000300: 1.769e0

VQSLOD
type: SiteQuality
SIO_000300: -1.412e0

QD
type: SiteQuality
SIO_000300: 8.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.69e-1

GenotypeQuality
all individuals: 2490
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41000
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1

FS
type: SiteQuality
SIO_000300: 1.179e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.486e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

DP
type: SiteQuality
SIO_000300: 1.768573e6

GenotypeQuality
all individuals: 2449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.115e0

MQRankSum
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SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

QD
type: SiteQuality
SIO_000300: 1.312e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-2

DP
type: SiteQuality
SIO_000300: 1.768163e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.768349e6

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.076e0

MQ
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SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

QD
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SIO_000300: 1.122e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 5.293e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.076e0

QD
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MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 1.768349e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42306760358614e-4
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 1.77069e6

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 1.77069e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.194e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
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SIO_000300: 1.77069e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495459585818323e-5
allele num: 66734
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
type: SiteQuality
SIO_000300: 1.77069e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.217294900221729e-3
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 65
allele frequency: 6.253607850683086e-3
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99610253335332e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
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SIO_000300: 1.44e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.11e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.354e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.770974e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2698
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 4.32e0

VQSLOD
type: SiteQuality
SIO_000300: 5.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.072e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

DP
type: SiteQuality
SIO_000300: 1.767828e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.072e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

FS
type: SiteQuality
SIO_000300: 7.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.66e0

VQSLOD
type: SiteQuality
SIO_000300: -5.923e-1

DP
type: SiteQuality
SIO_000300: 1.766071e6

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2433
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.098258445490243e-4
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 1.766862e6

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

QD
type: SiteQuality
SIO_000300: 1.297e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2425
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variant carriers: 24

GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 2.997422216893471e-4
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

QD
type: SiteQuality
SIO_000300: 1.334e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

DP
type: SiteQuality
SIO_000300: 1.766699e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.334e1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 746

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 579
allele frequency: 8.683523800953838e-3
allele num: 66678
num of homozygotes: 9

Latino
type: Population
allele count: 40
allele frequency: 3.458412588621822e-3
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 90
allele frequency: 5.451902108068815e-3
allele num: 16508
num of homozygotes: 1

African
type: Population
allele count: 26
allele frequency: 2.501924557351809e-3
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.607929515418502e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.419842710223836e-3
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.786686e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 111
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 3.114725731095345e-3
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925669170036588e-4
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349932503374831e-4
allele num: 66670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 3
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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South Asian
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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MQRankSum
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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Latino
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African
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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East Asian
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European (Non-Finnish)
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African
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South Asian
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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East Asian
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African
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Latino
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European (Non-Finnish)
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QD
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MQ
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FS
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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Other
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East Asian
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Latino
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FS
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VQSLOD
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MQ
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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Latino
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European (Finnish)
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South Asian
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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Other
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African
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South Asian
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East Asian
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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QD
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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allele num: 8132
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.0e-3

FS
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
SIO_000300: 1.377446e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.559965056782728e-5
allele num: 64104
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 1.377446e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11048
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.160670280926565e-5
allele num: 16232
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64132
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1908
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variant carriers: 3

GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
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African
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.749992083346528e-5
allele num: 63158
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 1.331794e6

GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.703703703703704e-3
allele num: 540
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European (Non-Finnish)
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allele frequency: 4.044489383215369e-4
allele num: 9890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 90
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African
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allele count: 167
allele frequency: 5.604026845637584e-2
allele num: 2980
num of homozygotes: 3

Other
type: Population
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allele frequency: 0.0e0
allele num: 206
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South Asian
type: Population
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allele num: 8020
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.84e-2

FS
type: SiteQuality
SIO_000300: 8.29e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.464203233256351e-3
allele num: 866
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 8024
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
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African
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
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variant carriers: 289

Other
type: Population
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allele frequency: 2.201834862385321e-1
allele num: 218
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South Asian
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East Asian
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African
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allele frequency: 3.334413480233312e-1
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European (Finnish)
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allele frequency: 3.671875e-1
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Latino
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allele frequency: 3.099041533546326e-1
allele num: 626
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European (Non-Finnish)
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allele frequency: 3.084967320261438e-1
allele num: 10710
num of homozygotes: 477

FS
type: SiteQuality
SIO_000300: 7.02e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
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allele frequency: 0.0e0
allele num: 210
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European (Non-Finnish)
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allele count: 0
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African
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South Asian
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East Asian
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Latino
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allele num: 558
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Latino
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East Asian
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African
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European (Finnish)
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Other
type: Population
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European (Non-Finnish)
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allele count: 1
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South Asian
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
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MQRankSum
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QD
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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Other
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East Asian
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African
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European (Finnish)
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DP
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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Other
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ReadPosRankSum
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MQ
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DP
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QD
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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Other
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MQRankSum
type: SiteQuality
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DP
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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ReadPosRankSum
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SIO_000300: -9.370000000000001e-1

QD
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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ClippingRankSum
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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MQRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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QD
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
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ClippingRankSum
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QD
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.48e-2

MQRankSum
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
allele num: 3142
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 8.333333333333333e-3
allele num: 120
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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FS
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QD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 610
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Other
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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East Asian
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.51164e5

GenotypeQuality
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variant carriers: 0

Latino
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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FS
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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Other
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South Asian
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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South Asian
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Other
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DP
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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European (Finnish)
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African
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MQ
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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Latino
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allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.793e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 4.929043e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.016e1

MQRankSum
type: SiteQuality
SIO_000300: -5.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.077e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 2.914e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 4.932125e6

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.315e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

DP
type: SiteQuality
SIO_000300: 4.934584e6

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 7.087e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

DP
type: SiteQuality
SIO_000300: 4.935411e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
all individuals: 600
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.744e0

QD
type: SiteQuality
SIO_000300: 1.258e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.17e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.093e0

MQRankSum
type: SiteQuality
SIO_000300: -1.078e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 4.935751e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.181e0

QD
type: SiteQuality
SIO_000300: 1.396e1

DP
type: SiteQuality
SIO_000300: 4.935901e6

MQRankSum
type: SiteQuality
SIO_000300: -1.052e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

QD
type: SiteQuality
SIO_000300: 1.174e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.276e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

DP
type: SiteQuality
SIO_000300: 4.936519e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 1041
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.018759018759019e-5
allele num: 66528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.93601e6

QD
type: SiteQuality
SIO_000300: 1.091e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.895e0

FS
type: SiteQuality
SIO_000300: 1.873e0

MQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 7

European (Non-Finnish)
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allele count: 120
allele frequency: 1.81312703976792e-3
allele num: 66184
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 17
allele frequency: 2.61056511056511e-3
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 3.72695174578266e-3
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num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.237136465324385e-3
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.808e0

DP
type: SiteQuality
SIO_000300: 4.939459e6

FS
type: SiteQuality
SIO_000300: 3.59107e2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.144e0

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

QD
type: SiteQuality
SIO_000300: 7.9e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.937e2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503804625703029e-5
allele num: 66498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

DP
type: SiteQuality
SIO_000300: 4.890559e6

QD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.802e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 1.39067e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.842e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.518e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -2.267e0

QD
type: SiteQuality
SIO_000300: 1.233e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

DP
type: SiteQuality
SIO_000300: 4.889466e6

FS
type: SiteQuality
SIO_000300: 1.3253e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.518e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.3253e1

DP
type: SiteQuality
SIO_000300: 4.889466e6

VQSLOD
type: SiteQuality
SIO_000300: -2.267e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.118e0

QD
type: SiteQuality
SIO_000300: 1.253e1

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

DP
type: SiteQuality
SIO_000300: 4.889141e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.718e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.206454531744835e-4
allele num: 66310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.876969e6

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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South Asian
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Latino
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African
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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FS
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BaseQRankSum
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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MQ
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
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MQ
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 5.0e-4

ReadPosRankSum
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VQSLOD
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SIO_000300: -2.919e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e0

QD
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SIO_000300: 1.237e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66188
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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QD
type: SiteQuality
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DP
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GenotypeQuality
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variant carriers: 0

African
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South Asian
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Latino
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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allele num: 6608
num of homozygotes: 0

FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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FS
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.858171e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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African
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Other
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South Asian
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: 4.065040650406504e-3
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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MQRankSum
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QD
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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