X-110437508-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437508
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437508
    reference: chr 0
allele count: 4
allele frequency: 4.561939736776077e-5
allele num: 87682
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-21T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-21T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

X-110437509-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437509
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437509
    reference: chr 0
allele count: 1
allele frequency: 1.139847944284233e-5
allele num: 87731
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-20C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-20C>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

X-110437509-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437509
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437509
    reference: chr 0
allele count: 1
allele frequency: 1.139847944284233e-5
allele num: 87731
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-20C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-20C>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

X-110437512-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437512
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437512
    reference: chr 0
allele count: 1
allele frequency: 1.139795976520203e-5
allele num: 87735
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-17T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-17T>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

X-110437514-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437514
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437514
    reference: chr 0
allele count: 6
allele frequency: 6.839321539303301e-5
allele num: 87728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-15C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-15C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 8751
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-110437519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437519
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437519
    reference: chr 0
allele count: 6
allele frequency: 6.839087665705394e-5
allele num: 87731
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-10C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-10C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8749
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-110437522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437522
    reference: chr 0
allele count: 1
allele frequency: 1.139757003806788e-5
allele num: 87738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1101-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.993-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1101-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.993-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.993-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1056-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1056-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1038-7G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1038-7G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8745
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1101-7G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-110437639-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437639
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437639
    reference: chr 0
allele count: 1
allele frequency: 1.139899916787306e-5
allele num: 87727
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1148G>C
  hgvsp: ENSP00000361080.1:p.Cys383Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1211G>C
  hgvsp: ENSP00000353864.4:p.Cys404Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1103G>C
  hgvsp: ENSP00000401982.1:p.Cys368Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1103G>C
  hgvsp: ENSP00000361077.4:p.Cys368Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1211G>C
  hgvsp: ENSP00000428921.1:p.Cys404Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1148G>C
  hgvsp: ENSP00000262836.4:p.Cys383Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1103G>C
  hgvsp: ENSP00000410853.1:p.Cys368Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1166G>C
  hgvsp: ENSP00000429113.1:p.Cys389Ser
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1166G>C
  hgvsp: ENSP00000389172.1:p.Cys389Ser
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2690
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys404Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

X-110437653-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437653
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437653
    reference: chr 0
allele count: 1
allele frequency: 1.140003876013178e-5
allele num: 87719
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1155+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1110+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1110+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1173+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1218+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1155+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1218+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1173+7A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1110+7A>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2917
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1218+7A>G
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-110437662-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437662
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437662
    reference: chr 0
allele count: 2
allele frequency: 2.280215708406015e-5
allele num: 87711
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1173+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1110+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1110+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1218+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1218+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1155+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1110+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1155+16A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1173+16A>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-110437682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437682
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437682
    reference: chr 0
allele count: 2
allele frequency: 2.280813794361828e-5
allele num: 87688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1218+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1218+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1110+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1155+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1173+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1110+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1155+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1173+36C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1110+36C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

X-110437684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437684
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437684
    reference: chr 0
allele count: 2
allele frequency: 2.281516295730142e-5
allele num: 87661
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1110+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1218+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1173+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1218+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1155+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1155+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1110+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1110+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1173+38G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

X-110437696-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110437696
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110437696
    reference: chr 0
allele count: 1
allele frequency: 1.141096593826667e-5
allele num: 87635
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1110+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1173+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1110+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1218+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1218+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1155+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1173+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1110+50T>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1155+50T>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2503
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 1884
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4707
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 41420
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

X-110439022-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439022
    reference: chr 0
allele count: 1
allele frequency: 1.308712096425907e-5
allele num: 76411
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-48T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-48T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
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genotype depth: GenotypeDepth
  all individuals: 2907
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3753
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-110439024-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439024
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439024
    reference: chr 0
allele count: 1
allele frequency: 1.307976037878986e-5
allele num: 76454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-46A>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-46A>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5776
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-110439035-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439035
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439035
    reference: chr 0
allele count: 1
allele frequency: 1.237577812704974e-5
allele num: 80803
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-35T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-35T>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

X-110439039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439039
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439039
    reference: chr 0
allele count: 1
allele frequency: 1.207729468599034e-5
allele num: 82800
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-31A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-31A>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13433
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

X-110439040-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439040
    reference: chr 0
allele count: 1
allele frequency: 1.202067556196658e-5
allele num: 83190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-30T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-30T>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

X-110439040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439040
    reference: chr 0
allele count: 1
allele frequency: 1.202067556196658e-5
allele num: 83190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-30T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-30T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS

X-110439049-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439049
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439050
    reference: chr 0
allele count: 1
allele frequency: 1.168879745651767e-5
allele num: 85552
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1156-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1111-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1174-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1111-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1111-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1219-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1174-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1156-13dupT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1219-13dupT
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

X-110439135-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439135
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439135
    reference: chr 0
allele count: 1
allele frequency: 1.139990880072959e-5
allele num: 87720
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1284T>C
  hgvsp: ENST00000360648.4:c.1284T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1221T>C
  hgvsp: ENST00000262836.4:c.1221T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1239T>C
  hgvsp: ENST00000417227.1:c.1239T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1176T>C
  hgvsp: ENST00000446737.1:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1221T>C
  hgvsp: ENST00000372010.1:c.1221T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1176T>C
  hgvsp: ENST00000425146.1:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1239T>C
  hgvsp: ENST00000519681.1:c.1239T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1284T>C
  hgvsp: ENST00000518291.1:c.1284T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1176T>C
  hgvsp: ENST00000372007.5:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn428Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-110439144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439144
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439144
    reference: chr 0
allele count: 303
allele frequency: 3.454172366621067e-3
allele num: 87720
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1248C>T
  hgvsp: ENST00000519681.1:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1185C>T
  hgvsp: ENST00000446737.1:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1230C>T
  hgvsp: ENST00000372010.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1185C>T
  hgvsp: ENST00000372007.5:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1230C>T
  hgvsp: ENST00000262836.4:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1293C>T
  hgvsp: ENST00000360648.4:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1248C>T
  hgvsp: ENST00000417227.1:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1293C>T
  hgvsp: ENST00000518291.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1185C>T
  hgvsp: ENST00000425146.1:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6532
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.75e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 9983
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13738
  bin: 9.75e1
  variant carriers: 301
hgvs: p.Leu431Leu
num of homozygotes: 2
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

X-110439159-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439159
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439159
    reference: chr 0
allele count: 1
allele frequency: 1.140120852810398e-5
allele num: 87710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1200T>C
  hgvsp: ENST00000372007.5:c.1200T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1200T>C
  hgvsp: ENST00000446737.1:c.1200T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1263T>C
  hgvsp: ENST00000417227.1:c.1263T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1200T>C
  hgvsp: ENST00000425146.1:c.1200T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1245T>C
  hgvsp: ENST00000262836.4:c.1245T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1263T>C
  hgvsp: ENST00000519681.1:c.1263T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1308T>C
  hgvsp: ENST00000360648.4:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1245T>C
  hgvsp: ENST00000372010.1:c.1245T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1308T>C
  hgvsp: ENST00000518291.1:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser436Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

X-110439173-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439173
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439173
    reference: chr 0
allele count: 1
allele frequency: 1.140641040264629e-5
allele num: 87670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1273+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1210+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1210+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1318+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1273+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1255+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1318+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1255+4G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1210+4G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1318+4G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

X-110439176-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439176
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439175
    reference: chr 0
allele count: 1
allele frequency: 1.14047192728351e-5
allele num: 87683
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1318+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1255+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1255+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1210+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1210+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1273+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1318+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1210+11delT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1273+11delT
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29268
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1318+11delT
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: AT
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-110439183-TTCAGGTGGTATTAGAGTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439183
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439165
    reference: chr 0
allele count: 1
allele frequency: 1.14100545400607e-5
allele num: 87642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6672
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: TTCAGGTGGTATTAGAGTA
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-110439195-T-TAAATC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439200
    reference: chr 0
allele count: 1
allele frequency: 1.141865351237782e-5
allele num: 87576
alternate allele: TAAATC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1210+27_1210+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1273+27_1273+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1318+27_1318+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1210+27_1210+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1255+27_1255+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1318+27_1318+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1273+27_1273+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1210+27_1210+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1255+27_1255+28insAATCA
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6633
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-110439197-G-GAAAAAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439197
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439204
    reference: chr 0
allele count: 1
allele frequency: 1.142896327874098e-5
allele num: 87497
alternate allele: GAAAAAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1255+29_1255+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1318+29_1318+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1273+29_1273+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1210+29_1210+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1318+29_1318+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1255+29_1255+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1210+29_1210+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1210+29_1210+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1273+29_1273+30insAAAAAAA
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13613
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

X-110439207-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439207
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439207
    reference: chr 0
allele count: 1
allele frequency: 1.144452837098583e-5
allele num: 87378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1318+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1210+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1273+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1318+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1255+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1273+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1210+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1255+38G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1210+38G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

X-110439641-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439641
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439641
    reference: chr 0
allele count: 2
allele frequency: 2.295078204789828e-5
allele num: 87143
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1319-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1256-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1211-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1274-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1211-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1211-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1274-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1319-31G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1256-31G>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

X-110439649-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439649
    reference: chr 0
allele count: 1
allele frequency: 1.145869141744013e-5
allele num: 87270
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1319-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1319-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1211-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1274-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1211-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1211-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1256-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1274-23T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1256-23T>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13012
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
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genotype depth: GenotypeDepth
  all individuals: 368
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
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genotype depth: GenotypeDepth
  all individuals: 172
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genotype depth: GenotypeDepth
  all individuals: 782
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genotype depth: GenotypeDepth
  all individuals: 14
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genotype depth: GenotypeDepth
  all individuals: 10762
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genotype depth: GenotypeDepth
  all individuals: 87
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
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genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
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genotype depth: GenotypeDepth
  all individuals: 535
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genotype quality: GenotypeQuality
  all individuals: 18
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genotype quality: GenotypeQuality
  all individuals: 118
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genotype quality: GenotypeQuality
  all individuals: 2238
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

X-110439652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439652
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439652
    reference: chr 0
allele count: 2
allele frequency: 2.289849098944379e-5
allele num: 87342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1211-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1211-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1319-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1256-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1274-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1256-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1274-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1319-20C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1211-20C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
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genotype depth: GenotypeDepth
  all individuals: 328
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genotype depth: GenotypeDepth
  all individuals: 143
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 172
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 49
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genotype depth: GenotypeDepth
  all individuals: 535
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genotype depth: GenotypeDepth
  all individuals: 87
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genotype depth: GenotypeDepth
  all individuals: 73
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
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genotype depth: GenotypeDepth
  all individuals: 352
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7997
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genotype quality: GenotypeQuality
  all individuals: 86
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genotype quality: GenotypeQuality
  all individuals: 12
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

X-110439691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439691
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439691
    reference: chr 0
allele count: 2
allele frequency: 2.281672465917518e-5
allele num: 87655
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1293C>T
  hgvsp: ENST00000417227.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1338C>T
  hgvsp: ENST00000518291.1:c.1338C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1230C>T
  hgvsp: ENST00000372007.5:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1230C>T
  hgvsp: ENST00000425146.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1338C>T
  hgvsp: ENST00000360648.4:c.1338C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1275C>T
  hgvsp: ENST00000262836.4:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1293C>T
  hgvsp: ENST00000519681.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1275C>T
  hgvsp: ENST00000372010.1:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1230C>T
  hgvsp: ENST00000446737.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13064
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
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genotype depth: GenotypeDepth
  all individuals: 2345
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genotype depth: GenotypeDepth
  all individuals: 250
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
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genotype depth: GenotypeDepth
  all individuals: 86
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genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 24910
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genotype depth: GenotypeDepth
  all individuals: 535
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 352
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 10
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genotype quality: GenotypeQuality
  all individuals: 8064
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala446Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

X-110439721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439721
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439721
    reference: chr 0
allele count: 1
allele frequency: 1.140589000159682e-5
allele num: 87674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1260C>T
  hgvsp: ENST00000372007.5:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1305C>T
  hgvsp: ENST00000262836.4:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1260C>T
  hgvsp: ENST00000446737.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1368C>T
  hgvsp: ENST00000518291.1:c.1368C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1323C>T
  hgvsp: ENST00000519681.1:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1368C>T
  hgvsp: ENST00000360648.4:c.1368C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1305C>T
  hgvsp: ENST00000372010.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1323C>T
  hgvsp: ENST00000417227.1:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1260C>T
  hgvsp: ENST00000425146.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser456Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-110439739-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439739
    reference: chr 0
allele count: 1
allele frequency: 1.140589000159682e-5
allele num: 87674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1341A>G
  hgvsp: ENST00000417227.1:c.1341A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1323A>G
  hgvsp: ENST00000262836.4:c.1323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1278A>G
  hgvsp: ENST00000372007.5:c.1278A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1386A>G
  hgvsp: ENST00000360648.4:c.1386A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1341A>G
  hgvsp: ENST00000519681.1:c.1341A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1278A>G
  hgvsp: ENST00000425146.1:c.1278A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1278A>G
  hgvsp: ENST00000446737.1:c.1278A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1386A>G
  hgvsp: ENST00000518291.1:c.1386A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1323A>G
  hgvsp: ENST00000372010.1:c.1323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro462Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

X-110439767-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439767
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439767
    reference: chr 0
allele count: 1
allele frequency: 1.140523956705711e-5
allele num: 87679
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1414C>A
  hgvsp: ENST00000360648.4:c.1414C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1306C>A
  hgvsp: ENST00000425146.1:c.1306C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1306C>A
  hgvsp: ENST00000446737.1:c.1306C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1351C>A
  hgvsp: ENST00000262836.4:c.1351C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1369C>A
  hgvsp: ENST00000417227.1:c.1369C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1369C>A
  hgvsp: ENST00000519681.1:c.1369C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1351C>A
  hgvsp: ENST00000372010.1:c.1351C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1414C>A
  hgvsp: ENST00000518291.1:c.1414C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1306C>A
  hgvsp: ENST00000372007.5:c.1306C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg472Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

X-110439784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439784
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439784
    reference: chr 0
allele count: 1
allele frequency: 1.140484934194019e-5
allele num: 87682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1323G>A
  hgvsp: ENST00000446737.1:c.1323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1368G>A
  hgvsp: ENST00000262836.4:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1431G>A
  hgvsp: ENST00000518291.1:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1431G>A
  hgvsp: ENST00000360648.4:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1386G>A
  hgvsp: ENST00000417227.1:c.1386G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1323G>A
  hgvsp: ENST00000372007.5:c.1323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1323G>A
  hgvsp: ENST00000425146.1:c.1323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1386G>A
  hgvsp: ENST00000519681.1:c.1386G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1368G>A
  hgvsp: ENST00000372010.1:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro477Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

X-110439829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439829
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439829
    reference: chr 0
allele count: 1
allele frequency: 1.141109614989616e-5
allele num: 87634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1368G>A
  hgvsp: ENST00000446737.1:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1413G>A
  hgvsp: ENST00000262836.4:c.1413G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1368G>A
  hgvsp: ENST00000425146.1:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1431G>A
  hgvsp: ENST00000417227.1:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1431G>A
  hgvsp: ENST00000519681.1:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1368G>A
  hgvsp: ENST00000372007.5:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1476G>A
  hgvsp: ENST00000518291.1:c.1476G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1476G>A
  hgvsp: ENST00000360648.4:c.1476G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1413G>A
  hgvsp: ENST00000372010.1:c.1413G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val492Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

X-110439869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439869
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439869
    reference: chr 0
allele count: 1
allele frequency: 1.153109937501441e-5
allele num: 86722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+1G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+1G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1515+1G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

X-110439882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439882
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439882
    reference: chr 0
allele count: 3
allele frequency: 3.503363228699552e-5
allele num: 85632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+14G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+14G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11455
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29774
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

X-110439885-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439885
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439885
    reference: chr 0
allele count: 1
allele frequency: 1.171316794340197e-5
allele num: 85374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+17G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+17G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

X-110439892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439892
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439892
    reference: chr 0
allele count: 1
allele frequency: 1.180219520830875e-5
allele num: 84730
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+24A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+24A>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6993
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

X-110439892-ACTTTATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439892
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439885
    reference: chr 0
allele count: 1
allele frequency: 1.180219520830875e-5
allele num: 84730
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+26_1515+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+26_1407+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+26_1470+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+26_1407+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+26_1515+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+26_1452+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+26_1470+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+26_1452+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+26_1407+32delTTTATTC
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6203
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: ACTTTATT
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-110439902-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439902
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439902
    reference: chr 0
allele count: 5
allele frequency: 5.967014344702484e-5
allele num: 83794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+34C>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+34C>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-110439916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439916
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439916
    reference: chr 0
allele count: 1
allele frequency: 1.225069828980252e-5
allele num: 81628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+48G>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+48G>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-110439918-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110439918
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110439918
    reference: chr 0
allele count: 170
allele frequency: 2.093802345058626e-3
allele num: 81192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1515+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1407+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1452+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1407+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1452+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1470+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1515+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1407+50C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1470+50C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11731
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 248
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5615
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2279
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5956
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

X-110459606-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459606
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459606
    reference: chr 0
allele count: 3
allele frequency: 3.462923630990858e-5
allele num: 86632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1471-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1516-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1471-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1453-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1453-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1408-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1516-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1408-43T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1408-43T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 52
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genotype quality: GenotypeQuality
  all individuals: 3654
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

X-110459608-ATATGTATGTGCTGAATGGATTTTTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459608
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459583
    reference: chr 0
allele count: 1
allele frequency: 1.154161328670521e-5
allele num: 86643
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9873
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: ATATGTATGTGCTGAATGGATTTTTC
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-110459611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459611
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459611
    reference: chr 0
allele count: 1
allele frequency: 1.153894972479605e-5
allele num: 86663
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1408-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1408-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1471-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1516-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1453-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1453-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1408-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1471-38T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1516-38T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22131
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5997
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

X-110459616-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459616
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459616
    reference: chr 0
allele count: 1
allele frequency: 1.153402537485583e-5
allele num: 86700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1453-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1408-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1516-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1408-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1471-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1408-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1471-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1453-33G>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1516-33G>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3656
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22132
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

X-110459646-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459646
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459646
    reference: chr 0
allele count: 1
allele frequency: 1.146749538433311e-5
allele num: 87203
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1471-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1453-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1453-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1471-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1408-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1516-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1408-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1408-3C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1516-3C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1516-3C>T
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

X-110459652-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459652
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459652
    reference: chr 0
allele count: 1
allele frequency: 1.144308780281271e-5
allele num: 87389
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1411T>C
  hgvsp: ENST00000446737.1:c.1411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1411T>C
  hgvsp: ENST00000425146.1:c.1411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1474T>C
  hgvsp: ENST00000519681.1:c.1474T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1456T>C
  hgvsp: ENST00000262836.4:c.1456T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1519T>C
  hgvsp: ENST00000518291.1:c.1519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1456T>C
  hgvsp: ENST00000372010.1:c.1456T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1519T>C
  hgvsp: ENST00000360648.4:c.1519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1474T>C
  hgvsp: ENST00000417227.1:c.1474T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1411T>C
  hgvsp: ENST00000372007.5:c.1411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15804
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu507Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

X-110459706-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459706
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459706
    reference: chr 0
allele count: 1
allele frequency: 1.139757003806788e-5
allele num: 87738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1528T>C
  hgvsp: ENSP00000429113.1:p.Ser510Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1573T>C
  hgvsp: ENSP00000353864.4:p.Ser525Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1573T>C
  hgvsp: ENSP00000428921.1:p.Ser525Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1528T>C
  hgvsp: ENSP00000389172.1:p.Ser510Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1465T>C
  hgvsp: ENSP00000410853.1:p.Ser489Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1510T>C
  hgvsp: ENSP00000262836.4:p.Ser504Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1510T>C
  hgvsp: ENSP00000361080.1:p.Ser504Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1465T>C
  hgvsp: ENSP00000401982.1:p.Ser489Pro
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1465T>C
  hgvsp: ENSP00000361077.4:p.Ser489Pro
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser525Pro
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS

X-110459719-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459719
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459719
    reference: chr 0
allele count: 1
allele frequency: 1.13986093696569e-5
allele num: 87730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1478G>A
  hgvsp: ENSP00000410853.1:p.Arg493His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1541G>A
  hgvsp: ENSP00000429113.1:p.Arg514His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1523G>A
  hgvsp: ENSP00000262836.4:p.Arg508His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1586G>A
  hgvsp: ENSP00000353864.4:p.Arg529His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1478G>A
  hgvsp: ENSP00000361077.4:p.Arg493His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1478G>A
  hgvsp: ENSP00000401982.1:p.Arg493His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1541G>A
  hgvsp: ENSP00000389172.1:p.Arg514His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1586G>A
  hgvsp: ENSP00000428921.1:p.Arg529His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1523G>A
  hgvsp: ENSP00000361080.1:p.Arg508His
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22135
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg529His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-110459733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459733
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459733
    reference: chr 0
allele count: 2
allele frequency: 2.279514007613577e-5
allele num: 87738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1555C>T
  hgvsp: ENSP00000429113.1:p.Arg519Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1537C>T
  hgvsp: ENSP00000262836.4:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1555C>T
  hgvsp: ENSP00000389172.1:p.Arg519Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1537C>T
  hgvsp: ENSP00000361080.1:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1492C>T
  hgvsp: ENSP00000410853.1:p.Arg498Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1492C>T
  hgvsp: ENSP00000401982.1:p.Arg498Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1600C>T
  hgvsp: ENSP00000428921.1:p.Arg534Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1600C>T
  hgvsp: ENSP00000353864.4:p.Arg534Cys
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1492C>T
  hgvsp: ENSP00000361077.4:p.Arg498Cys
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg534Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

X-110459734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459734
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459734
    reference: chr 0
allele count: 2
allele frequency: 2.279591953040406e-5
allele num: 87735
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1493G>A
  hgvsp: ENSP00000361077.4:p.Arg498His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1556G>A
  hgvsp: ENSP00000389172.1:p.Arg519His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1538G>A
  hgvsp: ENSP00000262836.4:p.Arg513His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1601G>A
  hgvsp: ENSP00000353864.4:p.Arg534His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1493G>A
  hgvsp: ENSP00000401982.1:p.Arg498His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1493G>A
  hgvsp: ENSP00000410853.1:p.Arg498His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1538G>A
  hgvsp: ENSP00000361080.1:p.Arg513His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1556G>A
  hgvsp: ENSP00000429113.1:p.Arg519His
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1601G>A
  hgvsp: ENSP00000428921.1:p.Arg534His
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6217
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg534His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

X-110459749-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459749
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459749
    reference: chr 0
allele count: 1
allele frequency: 1.139769994415127e-5
allele num: 87737
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1508A>G
  hgvsp: ENSP00000410853.1:p.Asp503Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1553A>G
  hgvsp: ENSP00000361080.1:p.Asp518Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1616A>G
  hgvsp: ENSP00000353864.4:p.Asp539Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1571A>G
  hgvsp: ENSP00000389172.1:p.Asp524Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1508A>G
  hgvsp: ENSP00000361077.4:p.Asp503Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1616A>G
  hgvsp: ENSP00000428921.1:p.Asp539Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1508A>G
  hgvsp: ENSP00000401982.1:p.Asp503Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1553A>G
  hgvsp: ENSP00000262836.4:p.Asp518Gly
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1571A>G
  hgvsp: ENSP00000429113.1:p.Asp524Gly
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp539Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ

X-110459759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459759
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459759
    reference: chr 0
allele count: 22
allele frequency: 2.507779816932073e-4
allele num: 87727
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1626G>A
  hgvsp: ENST00000518291.1:c.1626G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1581G>A
  hgvsp: ENST00000519681.1:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1581G>A
  hgvsp: ENST00000417227.1:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1563G>A
  hgvsp: ENST00000372010.1:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1626G>A
  hgvsp: ENST00000360648.4:c.1626G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1563G>A
  hgvsp: ENST00000262836.4:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1518G>A
  hgvsp: ENST00000425146.1:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1518G>A
  hgvsp: ENST00000372007.5:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1518G>A
  hgvsp: ENST00000446737.1:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22132
  bin: 9.75e1
  variant carriers: 21
hgvs: p.Arg542Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-110459777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459777
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459777
    reference: chr 0
allele count: 1
allele frequency: 1.140445914352512e-5
allele num: 87685
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1599G>A
  hgvsp: ENST00000519681.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1536G>A
  hgvsp: ENST00000446737.1:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1599G>A
  hgvsp: ENST00000417227.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1644G>A
  hgvsp: ENST00000360648.4:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1536G>A
  hgvsp: ENST00000425146.1:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1536G>A
  hgvsp: ENST00000372007.5:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1581G>A
  hgvsp: ENST00000262836.4:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1644G>A
  hgvsp: ENST00000518291.1:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1581G>A
  hgvsp: ENST00000372010.1:c.1581G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu548Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

X-110459809-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459809
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459809
    reference: chr 0
allele count: 5
allele frequency: 5.716310921583647e-5
allele num: 87469
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+23A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+23A>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22079
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5686
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-110459810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459810
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459810
    reference: chr 0
allele count: 1
allele frequency: 1.143523653786779e-5
allele num: 87449
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+24C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+24C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5507
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

X-110459822-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459822
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459822
    reference: chr 0
allele count: 1
allele frequency: 1.144400448604976e-5
allele num: 87382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+36T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+36T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13758
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

X-110459827-C-CATATTAAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459827
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459836
    reference: chr 0
allele count: 1
allele frequency: 1.14622376580356e-5
allele num: 87243
alternate allele: CATATTAAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

X-110459827-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459827
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459827
    reference: chr 0
allele count: 2953
allele frequency: 3.384798780417913e-2
allele num: 87243
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+41C>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+41C>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 2.25e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 3.75e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 4.25e1
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 9.75e1
  variant carriers: 348
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 1.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 5.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 3.25e1
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 4.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 5.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 6.25e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 10430
  bin: 2.75e1
  variant carriers: 247
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 6.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 8.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 22842
  bin: 9.75e1
  variant carriers: 2254
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 2.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 3.25e1
  variant carriers: 19
num of homozygotes: 104
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-110459838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110459838
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110459838
    reference: chr 0
allele count: 1
allele frequency: 1.148013362875544e-5
allele num: 87107
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+52C>T
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+52C>T
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

X-110460704-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110460704
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110460704
    reference: chr 0
allele count: 4
allele frequency: 4.835005439381119e-4
allele num: 8273
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+918A>G
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+918A>G
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

X-110460706-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110460706
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110460706
    reference: chr 0
allele count: 1
allele frequency: 1.20889748549323e-4
allele num: 8272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+920T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+920T>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

X-110460716-TTGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110460716
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110460712
    reference: chr 0
allele count: 1
allele frequency: 1.208021261174197e-4
allele num: 8278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1545+934_1545+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1590+934_1590+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1608+934_1608+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1590+934_1590+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1545+934_1545+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1653+934_1653+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1608+934_1608+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1545+934_1545+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1653+934_1653+937delCTGT
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: TTGTC
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD

X-110463537-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110463537
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110463537
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 51034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1546-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1654-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1609-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1546-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1591-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1609-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1546-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1654-49T>A
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1591-49T>A
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20382
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6485
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

X-110463562-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110463562
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110463562
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 54378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361077
  ensembl transcript: ENST00000372007
  gene symbol: PAK3
  hgvsc: ENST00000372007.5:c.1546-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000410853
  ensembl transcript: ENST00000446737
  gene symbol: PAK3
  hgvsc: ENST00000446737.1:c.1546-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000428921
  ensembl transcript: ENST00000518291
  gene symbol: PAK3
  hgvsc: ENST00000518291.1:c.1654-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1591-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000262836
  ensembl transcript: ENST00000262836
  gene symbol: PAK3
  hgvsc: ENST00000262836.4:c.1591-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000389172
  ensembl transcript: ENST00000417227
  gene symbol: PAK3
  hgvsc: ENST00000417227.1:c.1609-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1654-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000429113
  ensembl transcript: ENST00000519681
  gene symbol: PAK3
  hgvsc: ENST00000519681.1:c.1609-24T>C
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000401982
  ensembl transcript: ENST00000425146
  gene symbol: PAK3
  hgvsc: ENST00000425146.1:c.1546-24T>C
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

X-110463613-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24110463613
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24110463613
    reference: chr 0
allele count: 1
allele frequency: 1.290156108889176e-5
allele num: 77510
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000353864
  ensembl transcript: ENST00000360648
  gene symbol: PAK3
  hgvsc: ENST00000360648.4:c.1681C>G
  hgvsp: ENSP00000353864.4:p.Leu561Val
  variant of: http://identifiers.org/hgnc/8592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077264
  ensembl protein: ENSP00000361080
  ensembl transcript: ENST00000372010
  gene symbol: PAK3
  hgvsc: ENST00000372010.1:c.1618C>G
  hgvsp: ENSP00000361080.1:p.Leu540Val
  variant of: http://identifiers.org/hgnc/8592
canonical: true
consequence: missense
filter: PASS
hgvs: p.Leu561Val
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2725
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41434
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 4
allele frequency: 6.035003017501509e-4
allele num: 6628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9315
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47985
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.812e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

DP
type: SiteQuality
SIO_000300: 3.802629e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.704e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.101e1

MQ
type: SiteQuality
SIO_000300: 5.905e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.146e0

GenotypeQuality
all individuals: 4785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41459
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084114876411988e-5
allele num: 47982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.967e0

MQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.229999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.18e1

DP
type: SiteQuality
SIO_000300: 3.800658e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41459
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 7.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084114876411988e-5
allele num: 47982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 1.967e0

VQSLOD
type: SiteQuality
SIO_000300: -8.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 2.18e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.229999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

DP
type: SiteQuality
SIO_000300: 3.800658e6

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41461
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508295625942685e-4
allele num: 6630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47983
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

DP
type: SiteQuality
SIO_000300: 3.800801e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.38e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.25e0

FS
type: SiteQuality
SIO_000300: 3.729e0

MQRankSum
type: SiteQuality
SIO_000300: 4.16e-1

QD
type: SiteQuality
SIO_000300: 1.87e1

MQ
type: SiteQuality
SIO_000300: 5.829e1

GenotypeQuality
all individuals: 2660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41457
bin: 9.75e1
variant carriers: 5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.25247493799629e-5
allele num: 47981
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.524436090225564e-4
allele num: 8512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.3e1

DP
type: SiteQuality
SIO_000300: 3.80145e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.937e0

FS
type: SiteQuality
SIO_000300: 1.04254e2

MQRankSum
type: SiteQuality
SIO_000300: -3.85e0

VQSLOD
type: SiteQuality
SIO_000300: -6.014e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e0

QD
type: SiteQuality
SIO_000300: 2.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2726
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2962
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4810
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41458
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.25247493799629e-5
allele num: 47981
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.524436090225564e-4
allele num: 8512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.387e1

QD
type: SiteQuality
SIO_000300: 2.62e0

FS
type: SiteQuality
SIO_000300: 7.205800000000001e1

MQRankSum
type: SiteQuality
SIO_000300: -3.725e0

DP
type: SiteQuality
SIO_000300: 3.801534e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.88e0

VQSLOD
type: SiteQuality
SIO_000300: -3.417e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.098e0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41455
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08385429690756e-5
allele num: 47988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.797e0

VQSLOD
type: SiteQuality
SIO_000300: -7.503e0

MQRankSum
type: SiteQuality
SIO_000300: -2.967e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 3.801292e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.383e0

MQ
type: SiteQuality
SIO_000300: 5.343e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.719e0

GenotypeQuality
all individuals: 1639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4847
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41444
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2931
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10121
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084114876411988e-5
allele num: 47982
num of homozygotes: 0

ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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DP
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SIO_000300: 3.799458e6

BaseQRankSum
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SIO_000300: 1.73e0

MQ
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SIO_000300: 5.972e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.509889778046203e-4
allele num: 6623
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47982
num of homozygotes: 0

QD
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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Latino
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allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.168403501458941e-5
allele num: 47980
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.350452462098954e-4
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47969
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.218e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -7.94e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.85e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.53e-2

DP
type: SiteQuality
SIO_000300: 3.790535e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.51148730350665e-4
allele num: 6616
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.175502527330434e-4
allele num: 8507
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9309
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 3.789214e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.45e-1

FS
type: SiteQuality
SIO_000300: 3.559e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.085853739935756e-5
allele num: 47942
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele frequency: 1.862891207153502e-4
allele num: 5368
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
type: Population
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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East Asian
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South Asian
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African
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: 1.106072337130848e-4
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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African
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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QD
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MQRankSum
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FS
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VQSLOD
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 595
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45195
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.313208420078649e-4
allele num: 4323
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9111
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.262e0

DP
type: SiteQuality
SIO_000300: 1.824157e6

FS
type: SiteQuality
SIO_000300: 2.293e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: -7.848000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.38e0

QD
type: SiteQuality
SIO_000300: 1.899e1

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13426
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4351
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.200655795427037e-5
allele num: 45441
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.833193e6

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.012e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13426
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4351
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45441
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.026694045174538e-4
allele num: 9740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

QD
type: SiteQuality
SIO_000300: 3.012e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.833193e6

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.087192868014786e-4
allele num: 9198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6473
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4463
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46897
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.92e-1

FS
type: SiteQuality
SIO_000300: 2.828e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.06e0

DP
type: SiteQuality
SIO_000300: 1.895351e6

GenotypeQuality
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084505867884018e-5
allele num: 47973
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -1.027e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e0

DP
type: SiteQuality
SIO_000300: 1.925117e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.094e-1

FS
type: SiteQuality
SIO_000300: 1.008e0

QD
type: SiteQuality
SIO_000300: 1.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.609614765532782e-3
allele num: 9319
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.975894092076665e-4
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 276
allele frequency: 3.241338813857898e-2
allele num: 8515
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.876016175428357e-4
allele num: 47974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.579778830963665e-3
allele num: 633
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.893e1

FS
type: SiteQuality
SIO_000300: 1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.758e-1

DP
type: SiteQuality
SIO_000300: 1.958522e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 1.543e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3027
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084636230977694e-5
allele num: 47970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9315
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10121
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.932214e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 3.018e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.622e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.210433244916003e-4
allele num: 4524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

DP
type: SiteQuality
SIO_000300: 1.932161e6

QD
type: SiteQuality
SIO_000300: 2.759e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47965
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.931927e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.564e0

FS
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

QD
type: SiteQuality
SIO_000300: 1.132e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13615
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085679723021733e-5
allele num: 47946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.327e0

VQSLOD
type: SiteQuality
SIO_000300: -1.515e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.89e-2

DP
type: SiteQuality
SIO_000300: 1.931296e6

QD
type: SiteQuality
SIO_000300: 3.14e0

MQ
type: SiteQuality
SIO_000300: 5.282e1

MQRankSum
type: SiteQuality
SIO_000300: -1.086e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13616
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28494
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47903
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.076426264800861e-4
allele num: 9290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.958e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.528e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 3.785e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

QD
type: SiteQuality
SIO_000300: 2.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

DP
type: SiteQuality
SIO_000300: 1.927422e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.203e0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27925
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variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2409
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10099
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.07839965491211e-4
allele num: 9273
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47861
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.203e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

DP
type: SiteQuality
SIO_000300: 1.926431e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.859e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.944e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 2.31e0

MQ
type: SiteQuality
SIO_000300: 4.994e1

GenotypeQuality
all individuals: 323
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26425
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variant carriers: 0

GenotypeQuality
all individuals: 2402
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variant carriers: 0

GenotypeQuality
all individuals: 2995
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variant carriers: 0

GenotypeQuality
all individuals: 6447
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variant carriers: 0

GenotypeQuality
all individuals: 13612
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variant carriers: 0

GenotypeQuality
all individuals: 639
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variant carriers: 0

GenotypeQuality
all individuals: 1212
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 306
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variant carriers: 1

GenotypeQuality
all individuals: 1805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09139391404371e-5
allele num: 47815
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10073
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.119e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 2.504e0

DP
type: SiteQuality
SIO_000300: 1.921416e6

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.077e0

QD
type: SiteQuality
SIO_000300: 1.874e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.545e0

GenotypeQuality
all individuals: 6260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 7931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 1

GenotypeQuality
all individuals: 3160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2476
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variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34764
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8273
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9265
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.179116952587918e-5
allele num: 47857
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9977
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.91e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.599e0

DP
type: SiteQuality
SIO_000300: 1.891876e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.36e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6261
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088423866507947e-5
allele num: 47883
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9269
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-2

DP
type: SiteQuality
SIO_000300: 1.897964e6

QD
type: SiteQuality
SIO_000300: 1.458e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.62e0

FS
type: SiteQuality
SIO_000300: 2.48e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

GenotypeQuality
all individuals: 2495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 3174
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6261
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.175975612302424e-5
allele num: 47893
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.959e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.31e-2

FS
type: SiteQuality
SIO_000300: 2.319e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.86e0

QD
type: SiteQuality
SIO_000300: 1.953e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.900114e6

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 985
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GenotypeQuality
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GenotypeQuality
all individuals: 3184
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GenotypeQuality
all individuals: 2240
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GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 6260
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.169533220755937e-5
allele num: 47967
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10095
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9285
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.483e0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 1.907073e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.635e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.501e0

QD
type: SiteQuality
SIO_000300: 3.045e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 986
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 2238
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GenotypeQuality
all individuals: 2497
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GenotypeQuality
all individuals: 64
bin: 4.25e1
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 35538
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variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 6260
bin: 9.75e1
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 3171
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 6.75e1
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 47974
num of homozygotes: 0

FS
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
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Other
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East Asian
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European (Non-Finnish)
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allele frequency: 2.084549320436922e-5
allele num: 47972
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South Asian
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DP
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 9288
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South Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 1.507840772014475e-4
allele num: 6632
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47976
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9281
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African
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allele count: 1
allele frequency: 1.174398120963006e-4
allele num: 8515
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.5e0

VQSLOD
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QD
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InbreedingCoeff
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SIO_000300: 3.0e-4

DP
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.366e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
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BaseQRankSum
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SIO_000300: -9.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.085114368523113e-5
allele num: 47959
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4526
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
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allele num: 631
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -6.01e-1

MQ
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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allele frequency: 0.0e0
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 47537
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Other
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FS
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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African
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ReadPosRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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Other
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European (Finnish)
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 3.147e0

QD
type: SiteQuality
SIO_000300: 4.77e0

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

MQ
type: SiteQuality
SIO_000300: 4.937e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 1.696452e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.71e-1

GenotypeQuality
all individuals: 2176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6993
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24222
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.232437761893024e-4
allele num: 8114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6379
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9031
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9721
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4446
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.937e1

QD
type: SiteQuality
SIO_000300: 4.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.71e-1

DP
type: SiteQuality
SIO_000300: 1.696452e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.331e0

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

FS
type: SiteQuality
SIO_000300: 3.147e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
all individuals: 275
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2625
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6186
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4411
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9625
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.251562890722681e-4
allele num: 7998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.584855e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.768e0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.193e0

FS
type: SiteQuality
SIO_000300: 3.953e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.481e1

GenotypeQuality
all individuals: 4269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6694
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5620
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 902
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6045
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44673
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9361
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8791
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.279918085242545e-4
allele num: 7813
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.206e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.480597e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 264
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6738
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 903
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3297
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1922
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6235
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 6254
bin: 9.75e1
variant carriers: 135

GenotypeQuality
all individuals: 1838
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1300
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1551
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 728
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 892
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4569
bin: 4.75e1
variant carriers: 7

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

African
type: Population
allele count: 160
allele frequency: 2.056290965171572e-2
allele num: 7781
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 9.141812364301222e-4
allele num: 8751
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.501260352898812e-5
allele num: 44432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 1.678e0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.219e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 1.775e1

DP
type: SiteQuality
SIO_000300: 1.475587e6

GenotypeQuality
all individuals: 16931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22132
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 379
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.311670278344659e-5
allele num: 47531
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9275
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 4.906e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.489327e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.28e0

QD
type: SiteQuality
SIO_000300: 1.507e1

GenotypeQuality
all individuals: 5968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 17059
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22135
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2420
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10071
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103845830177565e-5
allele num: 47532
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 5.629e1

FS
type: SiteQuality
SIO_000300: 6.426e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

QD
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e0

DP
type: SiteQuality
SIO_000300: 2.490287e6

MQRankSum
type: SiteQuality
SIO_000300: -4.605e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.794e-1

GenotypeQuality
all individuals: 340
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
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variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.929500546122529e-5
allele num: 10071
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8101
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9275
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.491569e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 3.271e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6040
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
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GenotypeQuality
all individuals: 1523
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.077934677158564e-4
allele num: 9277
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47555
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

DP
type: SiteQuality
SIO_000300: 2.495381e6

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 6199
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18526
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6575
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 9.905894006934126e-5
allele num: 10095
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QD
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 6587
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.091262704420929e-5
allele num: 47818
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.905e1

QD
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VQSLOD
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InbreedingCoeff
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47981
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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Other
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FS
type: SiteQuality
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MQ
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DP
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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SIO_000300: -2.246e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 1
allele frequency: 1.072961373390558e-4
allele num: 9320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.08389772229979e-5
allele num: 47987
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.331e0

DP
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ReadPosRankSum
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QD
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MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
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African
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.167795444599579e-5
allele num: 47987
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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FS
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DP
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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Latino
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Other
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East Asian
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European (Non-Finnish)
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DP
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InbreedingCoeff
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FS
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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European (Non-Finnish)
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allele num: 47981
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South Asian
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East Asian
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European (Finnish)
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Latino
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num of homozygotes: 0

African
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FS
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DP
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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African
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East Asian
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European (Finnish)
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Other
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.045543891932583e-4
allele num: 47822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9297
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 3.234e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.13e-1

DP
type: SiteQuality
SIO_000300: 2.472084e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeQuality
all individuals: 691
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.091918917222768e-5
allele num: 47803
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.056e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.463885e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.843e1

QD
type: SiteQuality
SIO_000300: 1.005e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.126e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

GenotypeQuality
all individuals: 5134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.093320215193318e-5
allele num: 47771
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9295
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10067
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 1.734e0

DP
type: SiteQuality
SIO_000300: 2.428754e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.131e0

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.41e1

GenotypeQuality
all individuals: 10706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1875
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2172
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variant carriers: 0

GenotypeQuality
all individuals: 22842
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variant carriers: 1

GenotypeQuality
all individuals: 2301
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variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.097315436241611e-5
allele num: 47680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.866e0

DP
type: SiteQuality
SIO_000300: 2.428364e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

QD
type: SiteQuality
SIO_000300: 1.994e1

FS
type: SiteQuality
SIO_000300: 8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.079e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 13

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1151
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 1191
bin: 4.25e1
variant carriers: 23

GenotypeQuality
all individuals: 598
bin: 5.75e1
variant carriers: 31

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 2301
bin: 9.25e1
variant carriers: 39

GenotypeQuality
all individuals: 2172
bin: 7.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2087
bin: 3.75e1
variant carriers: 40

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 68

GenotypeQuality
all individuals: 1875
bin: 4.75e1
variant carriers: 42

GenotypeQuality
all individuals: 990
bin: 5.25e1
variant carriers: 50

GenotypeQuality
all individuals: 10706
bin: 6.25e1
variant carriers: 64

European (Finnish)
type: Population
allele count: 59
allele frequency: 1.3070447496677e-2
allele num: 4514
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.552352048558422e-4
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 143
allele frequency: 1.420906200317965e-2
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 194
allele frequency: 2.090066795949149e-2
allele num: 9282
num of homozygotes: 4

African
type: Population
allele count: 1305
allele frequency: 1.538189533239038e-1
allele num: 8484
num of homozygotes: 87

European (Non-Finnish)
type: Population
allele count: 1218
allele frequency: 2.554530201342282e-2
allele num: 47680
num of homozygotes: 13

Other
type: Population
allele count: 31
allele frequency: 4.92845786963434e-2
allele num: 629
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.079e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

DP
type: SiteQuality
SIO_000300: 2.428364e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.866e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

QD
type: SiteQuality
SIO_000300: 1.994e1

GenotypeQuality
all individuals: 2179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2766
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variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22010
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6579
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9281
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.972078181092939e-5
allele num: 10028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.070000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.912000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.793e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.709e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

DP
type: SiteQuality
SIO_000300: 2.384586e6

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2395
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 324
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 8.787346221441124e-4
allele num: 4552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 489
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 139
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

DP
type: SiteQuality
SIO_000300: 2.49879e5

QD
type: SiteQuality
SIO_000300: 2.942e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2841
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.136363636363636e-2
allele num: 88
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 139
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 489
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.487000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.98e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.903e1

MQ
type: SiteQuality
SIO_000300: 5.846e1

DP
type: SiteQuality
SIO_000300: 2.49876e5

GenotypeQuality
all individuals: 1340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 139
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.195871761089152e-4
allele num: 4554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.86e-2

MQ
type: SiteQuality
SIO_000300: 5.65e1

QD
type: SiteQuality
SIO_000300: 3.076e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.50155e5

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

GenotypeQuality
all individuals: 1165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12009
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6533
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3745
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6800
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4207
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6463
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25405
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 377
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.008273e6

QD
type: SiteQuality
SIO_000300: 1.917e1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3247
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6801
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21412
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3796
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6017
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 403
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27413
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2683
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.892e1

DP
type: SiteQuality
SIO_000300: 1.131294e6