22-26877688-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877688
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877688
    reference: chr 22
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.41G>C
  hgvsp: ENSP00000338457.5:p.Trp14Ser
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.41G>C
  hgvsp: ENSP00000406764.1:p.Trp14Ser
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.41G>C
  hgvsp: ENSP00000415081.2:p.Trp14Ser
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.612G>C
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.591G>C
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.41G>C
  hgvsp: ENSP00000381213.2:p.Trp14Ser
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Trp14Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

22-26877690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877690
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877690
    reference: chr 22
allele count: 9
allele frequency: 7.41399762752076e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.589G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.39G>A
  hgvsp: ENST00000422379.2:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.39G>A
  hgvsp: ENST00000336873.5:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.39G>A
  hgvsp: ENST00000398145.2:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.39G>A
  hgvsp: ENST00000439453.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.610G>A
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3901
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 7.25e1
  variant carriers: 0
hgvs: c.39G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-26877691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877691
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877691
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.609C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.38C>T
  hgvsp: ENSP00000381213.2:p.Ser13Leu
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.38C>T
  hgvsp: ENSP00000406764.1:p.Ser13Leu
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.588C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.38C>T
  hgvsp: ENSP00000338457.5:p.Ser13Leu
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.38C>T
  hgvsp: ENSP00000415081.2:p.Ser13Leu
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32828
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser13Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

22-26877702-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877702
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877702
    reference: chr 22
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.27A>T
  hgvsp: ENST00000398145.2:c.27A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.27A>T
  hgvsp: ENST00000439453.1:c.27A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.577A>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.598A>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.27A>T
  hgvsp: ENST00000422379.2:c.27A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.27A>T
  hgvsp: ENST00000336873.5:c.27A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32828
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala9Ala
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

22-26877706-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877706
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877706
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.23A>T
  hgvsp: ENSP00000406764.1:p.Glu8Val
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.23A>T
  hgvsp: ENSP00000415081.2:p.Glu8Val
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.23A>T
  hgvsp: ENSP00000381213.2:p.Glu8Val
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.594A>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.23A>T
  hgvsp: ENSP00000338457.5:p.Glu8Val
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.573A>T
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3901
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu8Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

22-26877709-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877709
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877709
    reference: chr 22
allele count: 4
allele frequency: 3.295055768818887e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.20C>G
  hgvsp: ENSP00000415081.2:p.Thr7Arg
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.591C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.20C>G
  hgvsp: ENSP00000381213.2:p.Thr7Arg
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.20C>G
  hgvsp: ENSP00000338457.5:p.Thr7Arg
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.20C>G
  hgvsp: ENSP00000406764.1:p.Thr7Arg
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.570C>G
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3902
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32830
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr7Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

22-26877714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877714
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877714
    reference: chr 22
allele count: 74
allele frequency: 6.095853172314942e-4
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.586C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.15C>T
  hgvsp: ENST00000439453.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.15C>T
  hgvsp: ENST00000398145.2:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.565C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.15C>T
  hgvsp: ENST00000422379.2:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.15C>T
  hgvsp: ENST00000336873.5:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8369
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr5Thr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

22-26877716-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877716
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877716
    reference: chr 22
allele count: 44
allele frequency: 3.624561345700776e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.13A>G
  hgvsp: ENSP00000415081.2:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.584A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.13A>G
  hgvsp: ENSP00000338457.5:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.13A>G
  hgvsp: ENSP00000381213.2:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.13A>G
  hgvsp: ENSP00000406764.1:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.563A>G
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32826
  bin: 9.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr5Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

22-26877720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877720
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877720
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.9C>T
  hgvsp: ENST00000422379.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.9C>T
  hgvsp: ENST00000398145.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.580C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.9C>T
  hgvsp: ENST00000439453.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.559C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.9C>T
  hgvsp: ENST00000336873.5:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr3Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum

22-26877734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877734
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877734
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.566C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-6C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.545C>T
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3968
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

22-26877736-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877736
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877736
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-8C>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.564C>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-8C>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-8C>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-8C>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.543C>A
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7746
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32813
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

22-26877739-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877739
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877739
    reference: chr 22
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.540C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-11C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-11C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-11C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.561C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-11C>G
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32812
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

22-26877770-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877770
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877770
    reference: chr 22
allele count: 13
allele frequency: 1.071210797804842e-4
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.509A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-42A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-42A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-42A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.530A>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-42A>G
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

22-26877772-T-TCCGGTATC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877772
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877780
    reference: chr 22
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: TCCGGTATC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.520_527dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-52_-45dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-52_-45dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-52_-45dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.499_506dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-52_-45dupGATACCGG
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6151
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32802
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

22-26877774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877774
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877774
    reference: chr 22
allele count: 4
allele frequency: 3.296902560044838e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-46G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-46G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-46G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-46G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.505G>A
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.526G>A
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3916
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

22-26877775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877775
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877775
    reference: chr 22
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.504C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-47C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-47C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.525C>T
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-47C>T
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32782
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

22-26877775-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26877775
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26877775
    reference: chr 22
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000415081
  ensembl transcript: ENST00000422379
  gene symbol: HPS4
  hgvsc: ENST00000422379.2:c.-47C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000381213
  ensembl transcript: ENST00000398145
  gene symbol: HPS4
  hgvsc: ENST00000398145.2:c.-47C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000338457
  ensembl transcript: ENST00000336873
  gene symbol: HPS4
  hgvsc: ENST00000336873.5:c.-47C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000466781
  gene symbol: HPS4
  hgvsc: ENST00000466781.1:n.525C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100099
  ensembl protein: ENSP00000406764
  ensembl transcript: ENST00000439453
  gene symbol: HPS4
  hgvsc: ENST00000439453.1:c.-47C>G
  variant of: http://identifiers.org/hgnc/15844
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100099
  ensembl transcript: ENST00000483631
  gene symbol: HPS4
  hgvsc: ENST00000483631.1:n.504C>G
  variant of: http://identifiers.org/hgnc/15844
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32782
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

22-26879821-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26879821
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26879821
    reference: chr 22
allele count: 8
allele frequency: 2.631578947368421e-2
allele num: 304
alternate allele: A
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 1
population: European (Non-Finnish)
  type: Population
  allele count: 6
  allele frequency: 8.333333333333333e-2
  allele num: 72
  num of homozygotes: 1
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 18
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/22-26879822-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26879822
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26879822
    reference: chr 22
allele count: 4
allele frequency: 1.290322580645161e-2
allele num: 310
alternate allele: A
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 210
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-26879823-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26879823
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26879823
    reference: chr 22
allele count: 409
allele frequency: 8.313008130081301e-1
allele num: 492
alternate allele: A
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 7.5e0
  variant carriers: 1750
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 208
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.5e0
  variant carriers: 1650
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 6.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 1.75e1
  variant carriers: 988
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.25e1
  variant carriers: 485
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 894
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 1.25e1
  variant carriers: 731
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.75e1
  variant carriers: 54
num of homozygotes: 167
population: African
  type: Population
  allele count: 2
  allele frequency: 3.333333333333333e-1
  allele num: 6
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 17
  allele frequency: 8.5e-1
  allele num: 20
  num of homozygotes: 7
population: South Asian
  type: Population
  allele count: 298
  allele frequency: 8.563218390804598e-1
  allele num: 348
  num of homozygotes: 125
population: Other
  type: Population
  allele count: 2
  allele frequency: 1.0e0
  allele num: 2
  num of homozygotes: 1
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

22-26879830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26879830
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26879830
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 204
alternate allele: A
canonical: true
consequence: upstream gene
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

22-26879896-G-GCGGCGGCTCCGCGGAAGAGGCGCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26879896
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 26879920
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 92
alternate allele: GCGGCGGCTCCGCGGAAGAGGCGCT
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000100104
  ensembl protein: ENSP00000215917
  ensembl transcript: ENST00000215917
  gene symbol: SRRD
  hgvsp: ENSP00000215917.6:p.Ala15_Ser22dup
  variant of: http://identifiers.org/hgnc/33910
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4287
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala15_Ser22dup
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

X-32383238-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383238
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383238
    reference: chr 0
allele count: 3
allele frequency: 3.428806546734633e-5
allele num: 87494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.172T>C
  hgvsp: ENST00000420596.1:c.172T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4924T>C
  hgvsp: ENST00000357033.4:c.4924T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4912T>C
  hgvsp: ENST00000378677.2:c.4912T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148058T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-411T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
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genotype quality: GenotypeQuality
  all individuals: 52
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 795
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
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genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu1642Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-32383251-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383251
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383251
    reference: chr 0
allele count: 1
allele frequency: 1.14386374295094e-5
allele num: 87423
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4911C>T
  hgvsp: ENST00000357033.4:c.4911C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-424C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.159C>T
  hgvsp: ENST00000420596.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148071C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4899C>T
  hgvsp: ENST00000378677.2:c.4899C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24167
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genotype depth: GenotypeDepth
  all individuals: 345
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17170
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
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genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37015
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala1637Ala
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

X-32383251-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383251
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383251
    reference: chr 0
allele count: 1
allele frequency: 1.14386374295094e-5
allele num: 87423
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4899C>G
  hgvsp: ENST00000378677.2:c.4899C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.159C>G
  hgvsp: ENST00000420596.1:c.159C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4911C>G
  hgvsp: ENST00000357033.4:c.4911C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-424C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148071C>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8020
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37015
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala1637Ala
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

X-32383254-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383254
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383254
    reference: chr 0
allele count: 3
allele frequency: 3.433201345814928e-5
allele num: 87382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4908G>A
  hgvsp: ENST00000357033.4:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148074G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.156G>A
  hgvsp: ENST00000420596.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4896G>A
  hgvsp: ENST00000378677.2:c.4896G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-427G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6145
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8019
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  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu1636Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

X-32383260-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383260
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383260
    reference: chr 0
allele count: 1
allele frequency: 1.144819690898684e-5
allele num: 87350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-433A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4902A>T
  hgvsp: ENST00000357033.4:c.4902A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4890A>T
  hgvsp: ENST00000378677.2:c.4890A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148080A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.150A>T
  hgvsp: ENST00000420596.1:c.150A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17200
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6135
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val1634Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

X-32383265-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383265
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383265
    reference: chr 0
allele count: 1
allele frequency: 1.145764110085016e-5
allele num: 87278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4885G>C
  hgvsp: ENSP00000367948.2:p.Glu1629Gln
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-438G>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148085G>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4897G>C
  hgvsp: ENSP00000354923.3:p.Glu1633Gln
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.145G>C
  hgvsp: ENSP00000399897.1:p.Glu49Gln
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6099
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu1633Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-32383284-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383284
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383284
    reference: chr 0
allele count: 658
allele frequency: 7.573751999907918e-3
allele num: 86879
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-457G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4866G>T
  hgvsp: ENST00000378677.2:c.4866G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance&benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4878G>T
  hgvsp: ENST00000357033.4:c.4878G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148104G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.126G>T
  hgvsp: ENST00000420596.1:c.126G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17200
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 6.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 22999
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 195
genotype quality: GenotypeQuality
  all individuals: 35954
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 8057
  bin: 9.75e1
  variant carriers: 559
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6002
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Val1626Val
num of homozygotes: 16
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

X-32383285-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383285
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383285
    reference: chr 0
allele count: 6
allele frequency: 6.909258406264395e-5
allele num: 86840
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4877T>A
  hgvsp: ENSP00000354923.3:p.Val1626Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.125T>A
  hgvsp: ENSP00000399897.1:p.Val42Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148105T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-458T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4865T>A
  hgvsp: ENSP00000367948.2:p.Val1622Glu
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7633
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6061
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val1626Glu
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

X-32383286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383286
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383286
    reference: chr 0
allele count: 11
allele frequency: 1.26763160320826e-4
allele num: 86776
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4876G>A
  hgvsp: ENSP00000354923.3:p.Val1626Met
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.124G>A
  hgvsp: ENSP00000399897.1:p.Val42Met
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4864G>A
  hgvsp: ENSP00000367948.2:p.Val1622Met
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-459G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148106G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 889
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1258
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genotype quality: GenotypeQuality
  all individuals: 35909
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val1626Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

X-32383292-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383292
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383292
    reference: chr 0
allele count: 1
allele frequency: 1.155588425626329e-5
allele num: 86536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-465C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148112C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4870C>G
  hgvsp: ENSP00000354923.3:p.Gln1624Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.118C>G
  hgvsp: ENSP00000399897.1:p.Gln40Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4858C>G
  hgvsp: ENSP00000367948.2:p.Gln1620Glu
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7624
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Gln1624Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

X-32383294-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383294
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383294
    reference: chr 0
allele count: 1
allele frequency: 1.157193112386595e-5
allele num: 86416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4856A>G
  hgvsp: ENSP00000367948.2:p.Lys1619Arg
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4868A>G
  hgvsp: ENSP00000354923.3:p.Lys1623Arg
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148114A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.116A>G
  hgvsp: ENSP00000399897.1:p.Lys39Arg
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-467A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1956
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7624
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys1623Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

X-32383300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383300
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383300
    reference: chr 0
allele count: 4
allele frequency: 4.646732185590484e-5
allele num: 86082
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4862T>C
  hgvsp: ENSP00000354923.3:p.Ile1621Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.110T>C
  hgvsp: ENSP00000399897.1:p.Ile37Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-473T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4850T>C
  hgvsp: ENSP00000367948.2:p.Ile1617Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148120T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21439
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile1621Thr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-32383311-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383311
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383311
    reference: chr 0
allele count: 1
allele frequency: 1.172085609132891e-5
allele num: 85318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148131T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.99T>G
  hgvsp: ENST00000420596.1:c.99T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4839T>G
  hgvsp: ENST00000378677.2:c.4839T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4851T>G
  hgvsp: ENST00000357033.4:c.4851T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-484T>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
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genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
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genotype quality: GenotypeQuality
  all individuals: 5720
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 31743
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genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1617Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

X-32383315-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383315
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383315
    reference: chr 0
allele count: 1
allele frequency: 1.176553639080406e-5
allele num: 84994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148135C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4835C>G
  hgvsp: ENSP00000367948.2:p.Ala1612Gly
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4847C>G
  hgvsp: ENSP00000354923.3:p.Ala1616Gly
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.95C>G
  hgvsp: ENSP00000399897.1:p.Ala32Gly
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-488C>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16060
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18710
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7622
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala1616Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

X-32383329-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383329
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383329
    reference: chr 0
allele count: 1
allele frequency: 1.194885888397658e-5
allele num: 83690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148149C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-13C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-13C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-502C>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-13C>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14660
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 194
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genotype depth: GenotypeDepth
  all individuals: 889
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genotype depth: GenotypeDepth
  all individuals: 707
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genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 312
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 270
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 276
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-32383335-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383335
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383335
    reference: chr 0
allele count: 1
allele frequency: 1.202631357410013e-5
allele num: 83151
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-19A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-508A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148155A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-19A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-19A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1978
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 37
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

X-32383338-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383338
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383338
    reference: chr 0
allele count: 7
allele frequency: 8.446965126101122e-5
allele num: 82870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-22G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-22G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148158G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-511G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-22G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

X-32383339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383339
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383339
    reference: chr 0
allele count: 1
allele frequency: 1.208444610941258e-5
allele num: 82751
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148159G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-23G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-23G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-512G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-23G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3318
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-32383340-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383340
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383340
    reference: chr 0
allele count: 1
allele frequency: 1.20981889011215e-5
allele num: 82657
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-24A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-24A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-513A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148160A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-24A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

X-32383344-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383344
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383344
    reference: chr 0
allele count: 1
allele frequency: 1.214181641573579e-5
allele num: 82360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-28T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148164T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-28T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-28T>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-517T>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

X-32383345-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383345
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383345
    reference: chr 0
allele count: 1
allele frequency: 1.220926683352665e-5
allele num: 81905
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148165C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-29C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-518C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-29C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-29C>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
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site quality: ClippingRankSum
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site quality: DP

X-32383347-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383347
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383347
    reference: chr 0
allele count: 2
allele frequency: 2.441525465110601e-5
allele num: 81916
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-520T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-31T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148167T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
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  gene symbol: DMD
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  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
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  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-31T>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-32383355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383355
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383355
    reference: chr 0
allele count: 1
allele frequency: 1.240525486596122e-5
allele num: 80611
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-528C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148175C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-39C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-39C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-39C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-32383358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383358
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383358
    reference: chr 0
allele count: 1
allele frequency: 1.244013186539777e-5
allele num: 80385
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-531C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-42C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148178C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-42C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-42C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-32383365-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032383365
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032383365
    reference: chr 0
allele count: 2
allele frequency: 2.523850386149109e-5
allele num: 79244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-49C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-148185C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4834-49C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4846-49C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-538C>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

X-32398578-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398578
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398578
    reference: chr 0
allele count: 2
allele frequency: 2.299405603651456e-5
allele num: 86979
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15751T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+49T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163398T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+49T>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15262T>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS

X-32398581-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398581
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398581
    reference: chr 0
allele count: 6
allele frequency: 6.897740989825832e-5
allele num: 86985
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163401A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+46A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15754A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+46A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15265A>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 204
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 555
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 8659
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 467
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-32398582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398582
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398582
    reference: chr 0
allele count: 1
allele frequency: 1.149768896451813e-5
allele num: 86974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15266C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+45C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15755C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+45C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163402C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 423
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

X-32398589-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398589
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398589
    reference: chr 0
allele count: 1
allele frequency: 1.149649931595829e-5
allele num: 86983
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+38G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15273G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+38G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15762G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163409G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 484
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-32398589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398589
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398589
    reference: chr 0
allele count: 2
allele frequency: 2.299299863191658e-5
allele num: 86983
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15273G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+38G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163409G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+38G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15762G>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8683
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-32398590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398590
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398590
    reference: chr 0
allele count: 1
allele frequency: 1.149213937666636e-5
allele num: 87016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+37C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15274C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+37C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163410C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15763C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 1000
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8705
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genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD

X-32398610-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398610
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398610
    reference: chr 0
allele count: 8
allele frequency: 9.167163221341156e-5
allele num: 87268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163430T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15294T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+17T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+17T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15783T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 11
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

X-32398611-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398611
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398611
    reference: chr 0
allele count: 1
allele frequency: 1.145947928126146e-5
allele num: 87264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15784C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+16C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+16C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163431C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15295C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-32398614-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398614
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398614
    reference: chr 0
allele count: 2
allele frequency: 2.291108209040713e-5
allele num: 87294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163434T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15298T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15787T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+13T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+13T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1003
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 82
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

X-32398617-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398617
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398617
    reference: chr 0
allele count: 13
allele frequency: 1.488725765262302e-4
allele num: 87323
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15790A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+10A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15301A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+10A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163437A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23154
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

X-32398618-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398618
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398618
    reference: chr 0
allele count: 1
allele frequency: 1.145331057942298e-5
allele num: 87311
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+9T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+9T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15791T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163438T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15302T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2168
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-32398620-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398620
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398620
    reference: chr 0
allele count: 1
allele frequency: 1.145094985629058e-5
allele num: 87329
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15793C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163440C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+7C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15304C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+7C>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 30
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hgvs: c.4845+7C>T
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

X-32398623-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398623
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398623
    reference: chr 0
allele count: 2
allele frequency: 2.289062857666072e-5
allele num: 87372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4833+4A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15796A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4845+4A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163443A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15307A>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32605
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  variant carriers: 0
hgvs: c.4845+4A>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-32398642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398642
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398642
    reference: chr 0
allele count: 1
allele frequency: 1.142452388296718e-5
allele num: 87531
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15815A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4818A>G
  hgvsp: ENST00000378677.2:c.4818A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4830A>G
  hgvsp: ENST00000357033.4:c.4830A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15326A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163462A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
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genotype depth: GenotypeDepth
  all individuals: 1135
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genotype depth: GenotypeDepth
  all individuals: 2755
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genotype depth: GenotypeDepth
  all individuals: 502
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 23313
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 853
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 119
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genotype depth: GenotypeDepth
  all individuals: 1722
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1544
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1008
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 8885
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2335
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genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu1610Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

X-32398659-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398659
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398659
    reference: chr 0
allele count: 1
allele frequency: 1.14187838995147e-5
allele num: 87575
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4813A>T
  hgvsp: ENSP00000354923.3:p.Ser1605Cys
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4801A>T
  hgvsp: ENSP00000367948.2:p.Ser1601Cys
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163479A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15832A>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15343A>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32806
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  variant carriers: 0
hgvs: p.Ser1605Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

X-32398661-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398661
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398661
    reference: chr 0
allele count: 1
allele frequency: 1.141826236883271e-5
allele num: 87579
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4811C>T
  hgvsp: ENSP00000354923.3:p.Pro1604Leu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15345C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15834C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163481C>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4799C>T
  hgvsp: ENSP00000367948.2:p.Pro1600Leu
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 19
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hgvs: p.Pro1604Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

X-32398680-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398680
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398680
    reference: chr 0
allele count: 1
allele frequency: 1.141695875052804e-5
allele num: 87589
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163500T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4792T>C
  hgvsp: ENSP00000354923.3:p.Ser1598Pro
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15364T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15853T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4780T>C
  hgvsp: ENSP00000367948.2:p.Ser1594Pro
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12987
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser1598Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

X-32398697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398697
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398697
    reference: chr 0
allele count: 2
allele frequency: 2.284461095627542e-5
allele num: 87548
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15381T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163517T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4775T>C
  hgvsp: ENSP00000354923.3:p.Met1592Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4763T>C
  hgvsp: ENSP00000367948.2:p.Met1588Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15870T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23388
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28
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genotype quality: GenotypeQuality
  all individuals: 32714
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  variant carriers: 0
hgvs: p.Met1592Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-32398698-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398698
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398698
    reference: chr 0
allele count: 1
allele frequency: 1.14234798204229e-5
allele num: 87539
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15382A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4774A>G
  hgvsp: ENSP00000354923.3:p.Met1592Val
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4762A>G
  hgvsp: ENSP00000367948.2:p.Met1588Val
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163518A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15871A>G
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met1592Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

X-32398707-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398707
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398707
    reference: chr 0
allele count: 1
allele frequency: 1.142374081816832e-5
allele num: 87537
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163527G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4765G>A
  hgvsp: ENSP00000354923.3:p.Ala1589Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15880G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4753G>A
  hgvsp: ENSP00000367948.2:p.Ala1585Thr
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15391G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala1589Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-32398709-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398709
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398709
    reference: chr 0
allele count: 1
allele frequency: 1.142491545562563e-5
allele num: 87528
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4763C>A
  hgvsp: ENSP00000354923.3:p.Ala1588Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163529C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15882C>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4751C>A
  hgvsp: ENSP00000367948.2:p.Ala1584Glu
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15393C>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala1588Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

X-32398710-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398710
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398710
    reference: chr 0
allele count: 4
allele frequency: 4.569705139775856e-5
allele num: 87533
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15394G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4762G>T
  hgvsp: ENSP00000354923.3:p.Ala1588Ser
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163530G>T
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4750G>T
  hgvsp: ENSP00000367948.2:p.Ala1584Ser
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15883G>T
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
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genotype depth: GenotypeDepth
  all individuals: 106
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genotype depth: GenotypeDepth
  all individuals: 852
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala1588Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD

X-32398716-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398716
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398716
    reference: chr 0
allele count: 1
allele frequency: 1.142661258070045e-5
allele num: 87515
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163536T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15400T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15889T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4756T>C
  hgvsp: ENSP00000354923.3:p.Trp1586Arg
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4744T>C
  hgvsp: ENSP00000367948.2:p.Trp1582Arg
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10162
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 204
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 502
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 118
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1008
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genotype quality: GenotypeQuality
  all individuals: 252
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp1586Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-32398718-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398718
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398718
    reference: chr 0
allele count: 1
allele frequency: 1.142778780883597e-5
allele num: 87506
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4742A>C
  hgvsp: ENSP00000367948.2:p.Glu1581Ala
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4754A>C
  hgvsp: ENSP00000354923.3:p.Glu1585Ala
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15891A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15402A>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163538A>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
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  variant carriers: 0
hgvs: p.Glu1585Ala
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

X-32398722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398722
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398722
    reference: chr 0
allele count: 1
allele frequency: 1.143079226821211e-5
allele num: 87483
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4750A>G
  hgvsp: ENSP00000354923.3:p.Thr1584Ala
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15406A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163542A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15895A>G
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4738A>G
  hgvsp: ENSP00000367948.2:p.Thr1580Ala
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
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  variant carriers: 0
hgvs: p.Thr1584Ala
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

X-32398727-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398727
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398727
    reference: chr 0
allele count: 1
allele frequency: 1.142935515578211e-5
allele num: 87494
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4745T>C
  hgvsp: ENSP00000354923.3:p.Val1582Ala
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4733T>C
  hgvsp: ENSP00000367948.2:p.Val1578Ala
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15900T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163547T>C
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15411T>C
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8466
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val1582Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-32398728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398728
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24032398728
    reference: chr 0
allele count: 13
allele frequency: 1.485901084707792e-4
allele num: 87489
alternate allele: T
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000354923
  ensembl transcript: ENST00000357033
  gene symbol: DMD
  hgvsc: ENST00000357033.4:c.4744G>A
  hgvsp: ENSP00000354923.3:p.Val1582Ile
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl transcript: ENST00000488902
  gene symbol: DMD
  hgvsc: ENST00000488902.1:n.336-163548G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000367948
  ensembl transcript: ENST00000378677
  gene symbol: DMD
  hgvsc: ENST00000378677.2:c.4732G>A
  hgvsp: ENSP00000367948.2:p.Val1578Ile
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000388559
  ensembl transcript: ENST00000448370
  gene symbol: DMD
  hgvsc: ENST00000448370.1:c.94-15901G>A
  variant of: http://identifiers.org/hgnc/2928
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: intron_variant
  ensembl gene: ENSG00000198947
  ensembl protein: ENSP00000399897
  ensembl transcript: ENST00000420596
  gene symbol: DMD
  hgvsc: ENST00000420596.1:c.94-15412G>A
  variant of: http://identifiers.org/hgnc/2928
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8889
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8472
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val1582Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

X-32398729-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24032398729
allele count: 2
allele frequency: 2.286001668781218e-5
allele num: 87489
alternate allele: T
canonical: true
consequence: missense
filter: PASS
hgvs: p.Asn1581Lys
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3622
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32834
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7712
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.042e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

FS
type: SiteQuality
SIO_000300: 3.855e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

DP
type: SiteQuality
SIO_000300: 3.272224e6

GenotypeQuality
all individuals: 3621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32836
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198789222884886e-4
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.272551e6

QD
type: SiteQuality
SIO_000300: 9.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.45e0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7726
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.272301e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.25e-1

FS
type: SiteQuality
SIO_000300: 7.326e0

VQSLOD
type: SiteQuality
SIO_000300: -5.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.95e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

GenotypeQuality
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3620
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.371e1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 3.272504e6

FS
type: SiteQuality
SIO_000300: 1.095e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32827
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.152e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.31e-1

DP
type: SiteQuality
SIO_000300: 3.272444e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 7.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3620
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.426e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 3.272564e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

African
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allele count: 72
allele frequency: 6.920415224913495e-3
allele num: 10404
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1

MQRankSum
type: SiteQuality
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DP
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.314e1

FS
type: SiteQuality
SIO_000300: 1.104e0

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.319281271596407e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
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allele count: 39
allele frequency: 2.362777171937477e-3
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 3.277353e6

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2245
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.275254e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.137e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2117
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.73e1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

QD
type: SiteQuality
SIO_000300: 5.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.828e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.409e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.282e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.581e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.62e0

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.88e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.701e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.37e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 12
allele frequency: 1.798722906736217e-4
allele num: 66714
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8652
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.917e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.996641880546894e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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MQRankSum
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SIO_000300: -2.03e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.259833e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.213297743266198e-4
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 4.42e-1

InbreedingCoeff
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SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

DP
type: SiteQuality
SIO_000300: 3.258196e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

FS
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.313e1

ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 3.258196e6

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 9.708737864077669e-3
allele num: 206
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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SIO_000300: 3.34e-2

FS
type: SiteQuality
SIO_000300: 2.914e0

MQRankSum
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SIO_000300: 0.0e0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.405405405405406e-2
allele num: 74
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.952e1

VQSLOD
type: SiteQuality
SIO_000300: -2.19e-2

MQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

Latino
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allele count: 2
allele frequency: 1.0e0
allele num: 2
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 88
allele frequency: 7.719298245614035e-1
allele num: 114
num of homozygotes: 33

VQSLOD
type: SiteQuality
SIO_000300: 1.814e1

FS
type: SiteQuality
SIO_000300: 6.837e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 2.7719e4

QD
type: SiteQuality
SIO_000300: 2.881e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.514e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.000000000000001e-2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.7223e4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.76e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.537e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.465e1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
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European (Non-Finnish)
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allele count: 3
allele frequency: 6.26527159952384e-5
allele num: 47883
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6597
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9261
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 9.522e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.51e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e0

DP
type: SiteQuality
SIO_000300: 1.868143e6

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 2.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47846
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10083
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.866701e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.926e1

VQSLOD
type: SiteQuality
SIO_000300: -5.499000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 7.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 10083
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Latino
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allele frequency: 1.081782778018174e-4
allele num: 9244
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47846
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6591
num of homozygotes: 0

Latino
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allele frequency: 1.081782778018174e-4
allele num: 9244
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Other
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allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10078
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African
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allele count: 2
allele frequency: 2.351005054660868e-4
allele num: 8507
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47816
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4517
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ReadPosRankSum
type: SiteQuality
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QD
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

South Asian
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allele frequency: 9.931472837421789e-5
allele num: 10069
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East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47807
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

FS
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DP
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VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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MQ
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4511
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.093539337604153e-5
allele num: 47766
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African
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Latino
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East Asian
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allele num: 6577
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InbreedingCoeff
type: SiteQuality
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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African
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allele count: 596
allele frequency: 7.020850512427848e-2
allele num: 8489
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Other
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allele frequency: 4.8e-3
allele num: 625
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele count: 39
allele frequency: 4.238209084981526e-3
allele num: 9202
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South Asian
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allele frequency: 8.020854220974534e-4
allele num: 9974
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European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.523977788995457e-4
allele num: 47544
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.111e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.805e0

QD
type: SiteQuality
SIO_000300: 1.549e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 1.860285e6

FS
type: SiteQuality
SIO_000300: 1.907e0

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9971
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.052144270022305e-4
allele num: 47522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.179106237471996e-4
allele num: 8481
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.84e-2

DP
type: SiteQuality
SIO_000300: 1.827609e6

QD
type: SiteQuality
SIO_000300: 1.398e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 1.146e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

GenotypeQuality
all individuals: 1975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7634
bin: 9.75e1
variant carriers: 10

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6549
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.196042187669892e-3
allele num: 9197
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8475
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4479
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47491
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

QD
type: SiteQuality
SIO_000300: 1.397e1

FS
type: SiteQuality
SIO_000300: 5.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.97e-2

DP
type: SiteQuality
SIO_000300: 1.825592e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.791e0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.111932418162619e-5
allele num: 47350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8459
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4469
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9925
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9173
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6539
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

FS
type: SiteQuality
SIO_000300: 6.166e0

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.466e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

DP
type: SiteQuality
SIO_000300: 1.817719e6

QD
type: SiteQuality
SIO_000300: 2.995e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 328
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35181
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.11496975593249e-5
allele num: 47282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8455
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4469
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9157
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

DP
type: SiteQuality
SIO_000300: 1.813982e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.614e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

FS
type: SiteQuality
SIO_000300: 6.86e0

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7625
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 301
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.743270484999407e-4
allele num: 8433
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9137
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e0

FS
type: SiteQuality
SIO_000300: 6.77e-1

MQ
type: SiteQuality
SIO_000300: 5.991e1

QD
type: SiteQuality
SIO_000300: 2.695e1

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

MQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 1.801534e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.378e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.44e-2

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7623
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1258
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6455
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9065
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46619
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4419
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.188919272381405e-4
allele num: 8411
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.834e0

MQ
type: SiteQuality
SIO_000300: 5.839e1

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.57e-1

DP
type: SiteQuality
SIO_000300: 1.770463e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.899e1

GenotypeQuality
all individuals: 5004
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5640
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30527
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variant carriers: 0

GenotypeQuality
all individuals: 339
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variant carriers: 0

GenotypeQuality
all individuals: 1887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8395
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.15475446572863e-5
allele num: 46409
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9034
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

QD
type: SiteQuality
SIO_000300: 1.503e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.1088e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.756389e6

VQSLOD
type: SiteQuality
SIO_000300: -3.425e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
all individuals: 1795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7619
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1251
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9549
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4341
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8915
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.192790106131041e-5
allele num: 45604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

FS
type: SiteQuality
SIO_000300: 2.418e0

MQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 1.684509e6

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeQuality
all individuals: 2762
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8871
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8315
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9501
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.209700585570655e-5
allele num: 45255
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.062e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 1.649226e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 5.06e0

GenotypeQuality
all individuals: 7623
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 2346
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variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8845
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.217885024840312e-5
allele num: 45088
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.226303745634108e-4
allele num: 8303
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6269
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4301
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3663e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

QD
type: SiteQuality
SIO_000300: 1.77e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.631026e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -7.060999999999999e-1

GenotypeQuality
all individuals: 2340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7617
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8299
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.221481728312785e-5
allele num: 45015
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9443
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 1.0577e1

QD
type: SiteQuality
SIO_000300: 7.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 1.625659e6

VQSLOD
type: SiteQuality
SIO_000300: -1.599e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2780
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7616
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 601
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.205254911413764e-4
allele num: 8297
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44957
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8819
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9431
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.98e1

MQRankSum
type: SiteQuality
SIO_000300: 7.86e-1

DP
type: SiteQuality
SIO_000300: 1.618029e6

FS
type: SiteQuality
SIO_000300: 4.055e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.503e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 2318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10533
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.20729204394543e-4
allele num: 8283
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44765
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9399
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.678e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

QD
type: SiteQuality
SIO_000300: 1.996e1

FS
type: SiteQuality
SIO_000300: 1.879e0

DP
type: SiteQuality
SIO_000300: 1.594907e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

GenotypeQuality
all individuals: 890
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
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variant carriers: 0

GenotypeQuality
all individuals: 15129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6181
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4275
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8257
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.06951871657754e-4
allele num: 9350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 595
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44493
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.249e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e0

DP
type: SiteQuality
SIO_000300: 1.567488e6

GenotypeQuality
all individuals: 10572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7616
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variant carriers: 1

GenotypeQuality
all individuals: 1245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4279
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9355
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.494988088281566e-5
allele num: 44494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.566135e6

QD
type: SiteQuality
SIO_000300: 2.527e1

GenotypeQuality
all individuals: 1229
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43655
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4213
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.709401709401709e-3
allele num: 585
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8191
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6081
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9224
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.517206e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.103e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

QD
type: SiteQuality
SIO_000300: 1.918e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

GenotypeQuality
all individuals: 7609
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5637
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.08695652173913e-4
allele num: 9200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8179
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43519
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4199
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8637
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.507881e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.233e-1

QD
type: SiteQuality
SIO_000300: 3.119e1

GenotypeQuality
all individuals: 347
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 577
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8125
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.67366158016498e-5
allele num: 42793
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.48927e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

QD
type: SiteQuality
SIO_000300: 9.85e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.248e0

GenotypeQuality
all individuals: 441
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9243
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.994017946161515e-4
allele num: 10030
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.96051e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 3.33e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.33e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.05035396928765e-4
allele num: 47603
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6525
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9239
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182872013248167e-4
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

QD
type: SiteQuality
SIO_000300: 2.329e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 1.963174e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.22e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
all individuals: 318
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.08283703302653e-4
allele num: 9235
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10029
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47605
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: -9.679e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.993e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.408e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

DP
type: SiteQuality
SIO_000300: 1.964309e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.534e0

GenotypeQuality
all individuals: 2297
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31238
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47605
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9237
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8455
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.96512207274539e-5
allele num: 10035
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.972531e6

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

QD
type: SiteQuality
SIO_000300: 1.698e1

FS
type: SiteQuality
SIO_000300: 8.702e0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.122e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.89e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.47e-1

GenotypeQuality
all individuals: 484
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 8.75e1
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GenotypeQuality
all individuals: 2297
bin: 7.25e1
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GenotypeQuality
all individuals: 1540
bin: 9.25e1
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GenotypeQuality
all individuals: 8495
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10035
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8455
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.165205153188264e-4
allele num: 9237
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47605
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.702e0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 1.972531e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.122e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.89e-2

QD
type: SiteQuality
SIO_000300: 1.698e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 1541
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182312603452353e-4
allele num: 8458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10041
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -3.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.196e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.973962e6

MQ
type: SiteQuality
SIO_000300: 5.848e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.254e1

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.216803369541122e-4
allele num: 4511
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.285618504860878e-5
allele num: 47728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.536901674133459e-4
allele num: 8482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10089
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.587301587301587e-3
allele num: 630
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.159e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.514e0

DP
type: SiteQuality
SIO_000300: 1.986299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.871e1

GenotypeQuality
all individuals: 8822
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.526251526251526e-4
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10091
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4511
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.926e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 2.607e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.9e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.629e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.986076e6

GenotypeQuality
all individuals: 362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.048315805517452e-4
allele num: 6561
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10095
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8485
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47733
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
SIO_000300: 2.284e1

VQSLOD
type: SiteQuality
SIO_000300: -2.131e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

FS
type: SiteQuality
SIO_000300: 6.61e-1

DP
type: SiteQuality
SIO_000300: 1.987192e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 2179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10097
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9280
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.828989483310471e-3
allele num: 6561
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.094021568422155e-5
allele num: 47755
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.988657e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.94e-2

FS
type: SiteQuality
SIO_000300: 6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.776e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1002
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.078748651564186e-4
allele num: 9270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6563
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47752
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.84e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

DP
type: SiteQuality
SIO_000300: 1.988545e6

FS
type: SiteQuality
SIO_000300: 7.32e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: -1.258e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.169e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2335
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 8476
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variant carriers: 1

GenotypeQuality
all individuals: 3063
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6571
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17813383600377e-4
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9267
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47763
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10093
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

QD
type: SiteQuality
SIO_000300: 3.166e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.989011e6

VQSLOD
type: SiteQuality
SIO_000300: -1.173e-1

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8858
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1543
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GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.35626767200754e-4
allele num: 8488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10097
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.989869e6

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088903743315508e-5
allele num: 47872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.039e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.992603e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 5.377e0

QD
type: SiteQuality
SIO_000300: 1.327e1

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3073
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088205813564985e-5
allele num: 47888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.06e-1

DP
type: SiteQuality
SIO_000300: 1.9934e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.902e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 3.959e0

QD
type: SiteQuality
SIO_000300: 1.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2180
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GenotypeQuality
all individuals: 8890
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.884353069091628e-5
allele num: 10117
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6605
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.67e0

FS
type: SiteQuality
SIO_000300: 1.741e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.024e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.28e-1

DP
type: SiteQuality
SIO_000300: 1.993549e6

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 8475
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2336
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087639088954302e-5
allele num: 47901
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6605
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

DP
type: SiteQuality
SIO_000300: 1.993621e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.92e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.888e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 3.282e1

GenotypeQuality
all individuals: 3071
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.152389151958674e-4
allele num: 9292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47886
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8501
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 1.829e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.29e-1

DP
type: SiteQuality
SIO_000300: 1.992826e6

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeQuality
all individuals: 8472
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8499
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47885
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.076078768965888e-4
allele num: 9293
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.089e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 1.992496e6

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.81e-2

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088162208440352e-5
allele num: 47889
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.187e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 6.18e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.009e0

DP
type: SiteQuality
SIO_000300: 1.992618e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4517
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088293029277868e-5
allele num: 47886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

FS
type: SiteQuality
SIO_000300: 6.574e0

DP
type: SiteQuality
SIO_000300: 1.992621e6

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.556e0

GenotypeQuality
all individuals: 8468
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47887
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.954522985664854e-4
allele num: 10115
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 1.993015e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.049e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.014e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

FS
type: SiteQuality
SIO_000300: 4.159e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

QD
type: SiteQuality
SIO_000300: 1.762e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47883
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.1768859597505e-4
allele num: 8497
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.137e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

FS
type: SiteQuality
SIO_000300: 3.919e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

DP
type: SiteQuality
SIO_000300: 1.992575e6

QD
type: SiteQuality
SIO_000300: 4.65e0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088772845953003e-5
allele num: 47875
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.292e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.36e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.99252e6

FS
type: SiteQuality
SIO_000300: 1.278e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: -1.136e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.891196834817012e-5
allele num: 10110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47865
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.08e-2

QD
type: SiteQuality
SIO_000300: 3.252e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.814e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9281
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6585
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47868
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.177024482109228e-4
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.784e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.45e1

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.426e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.992161e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

South Asian
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allele count: 12
allele frequency: 1.186943620178041e-3
allele num: 10110
num of homozygotes: 0

East Asian
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allele count: 0
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allele num: 6584
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.177163037080636e-4
allele num: 8495
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.565e-1

FS
type: SiteQuality
SIO_000300: 4.15e0

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

DP
type: SiteQuality
SIO_000300: 1.992607e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.58e-1