17-49247315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247315
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247315
    reference: chr 17
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.21C>T
  hgvsp: ENST00000393183.3:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.246C>T
  hgvsp: ENST00000393190.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.246C>T
  hgvsp: ENST00000514264.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.572C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.591C>T
  hgvsp: ENST00000393198.3:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.591C>T
  hgvsp: ENST00000393193.2:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.343C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.666C>T
  hgvsp: ENST00000608447.1:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.666C>T
  hgvsp: ENST00000555572.1:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1533C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.21C>T
  hgvsp: ENST00000393185.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.246C>T
  hgvsp: ENST00000512737.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.246C>T
  hgvsp: ENST00000503064.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.246C>T
  hgvsp: ENST00000513177.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn197Asn
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

17-49247316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247316
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247316
    reference: chr 17
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.667G>A
  hgvsp: ENSP00000451932.1:p.Val223Met
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.592G>A
  hgvsp: ENSP00000376894.3:p.Val198Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.22G>A
  hgvsp: ENSP00000376880.3:p.Val8Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.573G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.247G>A
  hgvsp: ENSP00000426901.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.22G>A
  hgvsp: ENSP00000376882.1:p.Val8Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.667G>A
  hgvsp: ENSP00000477284.1:p.Val223Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.247G>A
  hgvsp: ENSP00000421064.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.592G>A
  hgvsp: ENSP00000376889.2:p.Val198Met
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.247G>A
  hgvsp: ENSP00000425581.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.247G>A
  hgvsp: ENSP00000426976.2:p.Val83Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.344G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.247G>A
  hgvsp: ENSP00000376886.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1532G>A
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val198Met
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

17-49247324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247324
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247324
    reference: chr 17
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.675G>A
  hgvsp: ENST00000608447.1:c.675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.600G>A
  hgvsp: ENST00000393198.3:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.30G>A
  hgvsp: ENST00000393185.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.675G>A
  hgvsp: ENST00000555572.1:c.675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.255G>A
  hgvsp: ENST00000513177.1:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.255G>A
  hgvsp: ENST00000503064.1:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1524G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.30G>A
  hgvsp: ENST00000393183.3:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.255G>A
  hgvsp: ENST00000393190.1:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.581G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.255G>A
  hgvsp: ENST00000514264.2:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.600G>A
  hgvsp: ENST00000393193.2:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.255G>A
  hgvsp: ENST00000512737.1:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.352G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys200Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/17-49247330-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247330
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247330
    reference: chr 17
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.261C>A
  hgvsp: ENST00000514264.2:c.261C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.606C>A
  hgvsp: ENST00000393193.2:c.606C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.606C>A
  hgvsp: ENST00000393198.3:c.606C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.681C>A
  hgvsp: ENST00000555572.1:c.681C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1518C>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.681C>A
  hgvsp: ENST00000608447.1:c.681C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.36C>A
  hgvsp: ENST00000393183.3:c.36C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.261C>A
  hgvsp: ENST00000393190.1:c.261C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.261C>A
  hgvsp: ENST00000513177.1:c.261C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.261C>A
  hgvsp: ENST00000512737.1:c.261C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.36C>A
  hgvsp: ENST00000393185.1:c.36C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.358C>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.261C>A
  hgvsp: ENST00000503064.1:c.261C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.587C>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly202Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

17-49247331-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247331
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247331
    reference: chr 17
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.359C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.682C>T
  hgvsp: ENSP00000451932.1:p.Arg228Ter
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.607C>T
  hgvsp: ENSP00000376889.2:p.Arg203Ter
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.37C>T
  hgvsp: ENSP00000376880.3:p.Arg13Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.262C>T
  hgvsp: ENSP00000426901.1:p.Arg88Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.262C>T
  hgvsp: ENSP00000426976.2:p.Arg88Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.607C>T
  hgvsp: ENSP00000376894.3:p.Arg203Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.262C>T
  hgvsp: ENSP00000425581.1:p.Arg88Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.37C>T
  hgvsp: ENSP00000376882.1:p.Arg13Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.682C>T
  hgvsp: ENSP00000477284.1:p.Arg228Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.262C>T
  hgvsp: ENSP00000376886.1:p.Arg88Ter
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.588C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1517C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.262C>T
  hgvsp: ENSP00000421064.1:p.Arg88Ter
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg203Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

17-49247341-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247341
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247341
    reference: chr 17
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.272T>C
  hgvsp: ENSP00000376886.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.692T>C
  hgvsp: ENSP00000477284.1:p.Leu231Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.47T>C
  hgvsp: ENSP00000376882.1:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.272T>C
  hgvsp: ENSP00000425581.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1507T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.47T>C
  hgvsp: ENSP00000376880.3:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.617T>C
  hgvsp: ENSP00000376889.2:p.Leu206Pro
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.272T>C
  hgvsp: ENSP00000426976.2:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.272T>C
  hgvsp: ENSP00000421064.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.617T>C
  hgvsp: ENSP00000376894.3:p.Leu206Pro
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.692T>C
  hgvsp: ENSP00000451932.1:p.Leu231Pro
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.369T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.598T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.272T>C
  hgvsp: ENSP00000426901.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu206Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

17-49247346-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247346
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247346
    reference: chr 17
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.603G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.52G>A
  hgvsp: ENSP00000376882.1:p.Glu18Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.277G>A
  hgvsp: ENSP00000421064.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1502G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.697G>A
  hgvsp: ENSP00000477284.1:p.Glu233Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.277G>A
  hgvsp: ENSP00000426976.2:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.622G>A
  hgvsp: ENSP00000376894.3:p.Glu208Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.52G>A
  hgvsp: ENSP00000376880.3:p.Glu18Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.622G>A
  hgvsp: ENSP00000376889.2:p.Glu208Lys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.277G>A
  hgvsp: ENSP00000376886.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.374G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.697G>A
  hgvsp: ENSP00000451932.1:p.Glu233Lys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.277G>A
  hgvsp: ENSP00000425581.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.277G>A
  hgvsp: ENSP00000426901.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu208Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

17-49247378-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247378
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247378
    reference: chr 17
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.635C>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.654C>G
  hgvsp: ENST00000393193.2:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.309C>G
  hgvsp: ENST00000512737.1:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.84C>G
  hgvsp: ENST00000393185.1:c.84C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.406C>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.654C>G
  hgvsp: ENST00000393198.3:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.309C>G
  hgvsp: ENST00000513177.1:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.309C>G
  hgvsp: ENST00000514264.2:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1470C>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.309C>G
  hgvsp: ENST00000503064.1:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.309C>G
  hgvsp: ENST00000393190.1:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.729C>G
  hgvsp: ENST00000608447.1:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.84C>G
  hgvsp: ENST00000393183.3:c.84C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.729C>G
  hgvsp: ENST00000555572.1:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr218Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-49247382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247382
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247382
    reference: chr 17
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1466C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.733C>T
  hgvsp: ENSP00000477284.1:p.Arg245Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.313C>T
  hgvsp: ENSP00000426901.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.658C>T
  hgvsp: ENSP00000376894.3:p.Arg220Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.313C>T
  hgvsp: ENSP00000425581.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.658C>T
  hgvsp: ENSP00000376889.2:p.Arg220Cys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.313C>T
  hgvsp: ENSP00000426976.2:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.313C>T
  hgvsp: ENSP00000421064.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.313C>T
  hgvsp: ENSP00000376886.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.88C>T
  hgvsp: ENSP00000376882.1:p.Arg30Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.639C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.733C>T
  hgvsp: ENSP00000451932.1:p.Arg245Cys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.88C>T
  hgvsp: ENSP00000376880.3:p.Arg30Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.410C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15654
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg220Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

17-49247383-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247383
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247383
    reference: chr 17
allele count: 2
allele frequency: 1.649511744523621e-5
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.314G>A
  hgvsp: ENSP00000376886.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.734G>A
  hgvsp: ENSP00000477284.1:p.Arg245His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.314G>A
  hgvsp: ENSP00000426976.2:p.Arg105His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.314G>A
  hgvsp: ENSP00000425581.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.314G>A
  hgvsp: ENSP00000421064.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.640G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.314G>A
  hgvsp: ENSP00000426901.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.659G>A
  hgvsp: ENSP00000376889.2:p.Arg220His
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.734G>A
  hgvsp: ENSP00000451932.1:p.Arg245His
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.89G>A
  hgvsp: ENSP00000376880.3:p.Arg30His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.659G>A
  hgvsp: ENSP00000376894.3:p.Arg220His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.89G>A
  hgvsp: ENSP00000376882.1:p.Arg30His
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.411G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1465G>A
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg220His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

17-49247388-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247388
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247389
    reference: chr 17
allele count: 5
allele frequency: 4.125821038386639e-5
allele num: 121188
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.319_320insC
  hgvsp: ENSP00000421064.1:p.Asp107AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.94_95insC
  hgvsp: ENSP00000376882.1:p.Asp32AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.416_417insC
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.664_665insC
  hgvsp: ENSP00000376894.3:p.Asp222AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.664_665insC
  hgvsp: ENSP00000376889.2:p.Asp222AlafsTer15
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.319_320insC
  hgvsp: ENSP00000426901.1:p.Asp107AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1460_574-1459insC
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.94_95insC
  hgvsp: ENSP00000376880.3:p.Asp32AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.319_320insC
  hgvsp: ENSP00000426976.2:p.Asp107AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.739_740insC
  hgvsp: ENSP00000477284.1:p.Asp247AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.319_320insC
  hgvsp: ENSP00000425581.1:p.Asp107AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.739_740insC
  hgvsp: ENSP00000451932.1:p.Asp247AlafsTer15
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.319_320insC
  hgvsp: ENSP00000376886.1:p.Asp107AlafsTer15
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.645_646insC
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28623
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp222AlafsTer15
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

17-49247389-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247389
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247389
    reference: chr 17
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.665A>T
  hgvsp: ENSP00000376894.3:p.Asp222Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.740A>T
  hgvsp: ENSP00000451932.1:p.Asp247Val
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.740A>T
  hgvsp: ENSP00000477284.1:p.Asp247Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.95A>T
  hgvsp: ENSP00000376882.1:p.Asp32Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.417A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.95A>T
  hgvsp: ENSP00000376880.3:p.Asp32Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.320A>T
  hgvsp: ENSP00000421064.1:p.Asp107Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.320A>T
  hgvsp: ENSP00000426901.1:p.Asp107Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.665A>T
  hgvsp: ENSP00000376889.2:p.Asp222Val
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.646A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.320A>T
  hgvsp: ENSP00000425581.1:p.Asp107Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.320A>T
  hgvsp: ENSP00000376886.1:p.Asp107Val
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1459A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.320A>T
  hgvsp: ENSP00000426976.2:p.Asp107Val
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp222Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/17-49247390-C-CCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247390
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247392
    reference: chr 17
allele count: 5
allele frequency: 4.127455836222553e-5
allele num: 121140
alternate allele: CCA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.741_742insCA
  hgvsp: ENSP00000451932.1:p.Phe248HisfsTer17
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.321_322insCA
  hgvsp: ENSP00000425581.1:p.Phe108HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.96_97insCA
  hgvsp: ENSP00000376880.3:p.Phe33HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.321_322insCA
  hgvsp: ENSP00000421064.1:p.Phe108HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.666_667insCA
  hgvsp: ENSP00000376889.2:p.Phe223HisfsTer17
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.321_322insCA
  hgvsp: ENSP00000426976.2:p.Phe108HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.321_322insCA
  hgvsp: ENSP00000376886.1:p.Phe108HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.666_667insCA
  hgvsp: ENSP00000376894.3:p.Phe223HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.741_742insCA
  hgvsp: ENSP00000477284.1:p.Phe248HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.647_648insCA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.418_419insCA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.96_97insCA
  hgvsp: ENSP00000376882.1:p.Phe33HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.321_322insCA
  hgvsp: ENSP00000426901.1:p.Phe108HisfsTer17
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1458_574-1457insCA
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10654
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe223HisfsTer17
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/17-49247393-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247393
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247393
    reference: chr 17
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.99C>A
  hgvsp: ENSP00000376880.3:p.Phe33Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.324C>A
  hgvsp: ENSP00000421064.1:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.324C>A
  hgvsp: ENSP00000425581.1:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.669C>A
  hgvsp: ENSP00000376889.2:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.744C>A
  hgvsp: ENSP00000451932.1:p.Phe248Leu
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.324C>A
  hgvsp: ENSP00000376886.1:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.324C>A
  hgvsp: ENSP00000426901.1:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1455C>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.99C>A
  hgvsp: ENSP00000376882.1:p.Phe33Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.669C>A
  hgvsp: ENSP00000376894.3:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.650C>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.324C>A
  hgvsp: ENSP00000426976.2:p.Phe108Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.421C>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.744C>A
  hgvsp: ENSP00000477284.1:p.Phe248Leu
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe223Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-49247404-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247404
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247404
    reference: chr 17
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.680T>A
  hgvsp: ENSP00000376889.2:p.Val227Asp
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.661T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.335T>A
  hgvsp: ENSP00000421064.1:p.Val112Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.755T>A
  hgvsp: ENSP00000451932.1:p.Val252Asp
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.335T>A
  hgvsp: ENSP00000376886.1:p.Val112Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1444T>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.335T>A
  hgvsp: ENSP00000425581.1:p.Val112Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.335T>A
  hgvsp: ENSP00000426901.1:p.Val112Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.432T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.755T>A
  hgvsp: ENSP00000477284.1:p.Val252Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.680T>A
  hgvsp: ENSP00000376894.3:p.Val227Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.110T>A
  hgvsp: ENSP00000376880.3:p.Val37Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.110T>A
  hgvsp: ENSP00000376882.1:p.Val37Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.335T>A
  hgvsp: ENSP00000426976.2:p.Val112Asp
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val227Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-49247411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247411
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247411
    reference: chr 17
allele count: 2
allele frequency: 1.670425123193853e-5
allele num: 119730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+1G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1437G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+1G>A
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.686+1G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

17-49247418-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247418
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247418
    reference: chr 17
allele count: 2
allele frequency: 1.683870207284422e-5
allele num: 118774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+8C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1430C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+8C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+8C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+8C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.686+8C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

17-49247419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247419
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247419
    reference: chr 17
allele count: 15
allele frequency: 1.270777207340009e-4
allele num: 118038
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+9G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1429G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+9G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+9G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+9G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14626
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25131
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

17-49247423-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247423
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247423
    reference: chr 17
allele count: 1
allele frequency: 8.486658972095866e-6
allele num: 117832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1425A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+13A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+13A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+13A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+13A>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

17-49247424-CAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247424
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247421
    reference: chr 17
allele count: 1
allele frequency: 8.500943604740126e-6
allele num: 117634
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+18_686+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+18_116+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+18_341+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+18_341+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+18_667+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1420_574-1418delAGG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+18_341+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+18_116+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+18_761+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+18_761+20delAGG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+18_686+20delAGG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+18_341+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+18_341+20delAGG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+18_438+20delAGG
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: CAGG
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

17-49247428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247428
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247428
    reference: chr 17
allele count: 1
allele frequency: 8.566924816667809e-6
allele num: 116728
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+18A>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+18A>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+18A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1420A>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+18A>G
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22313
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-49247430-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247430
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247430
    reference: chr 17
allele count: 1
allele frequency: 8.577653497109331e-6
allele num: 116582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1418G>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+20G>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+20G>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+20G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+20G>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

17-49247434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247434
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247434
    reference: chr 17
allele count: 1
allele frequency: 8.629914736442405e-6
allele num: 115876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+24G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1414G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+24G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+24G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+24G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-49247434-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247434
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247434
    reference: chr 17
allele count: 1
allele frequency: 8.629914736442405e-6
allele num: 115876
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+24G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1414G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+24G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+24G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+24G>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS

17-49247445-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247445
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247445
    reference: chr 17
allele count: 1
allele frequency: 8.741258741258741e-6
allele num: 114400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+35T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+35T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1403T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+35T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+35T>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

17-49247462-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49247462
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49247462
    reference: chr 17
allele count: 5
allele frequency: 4.646321971527339e-5
allele num: 107612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.116+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.761+52C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.116+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-1386C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.341+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.341+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.761+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.341+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.341+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.686+52C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.667+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.686+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.341+52C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.438+52C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

17-49248797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248797
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248797
    reference: chr 17
allele count: 1
allele frequency: 8.460523198754612e-6
allele num: 118196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-51C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-51C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-51C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-51C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-51C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-49248805-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248805
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248805
    reference: chr 17
allele count: 5
allele frequency: 4.221190375685944e-5
allele num: 118450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-43T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-43T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-43T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-43T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-43T>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15169
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-49248820-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248820
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248820
    reference: chr 17
allele count: 1
allele frequency: 8.422187410514259e-6
allele num: 118734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-28G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-28G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-28G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-28G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-28G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-49248834-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248834
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248834
    reference: chr 17
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-14G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-14G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-14G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-14G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-14G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

17-49248840-TTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248840
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248837
    reference: chr 17
allele count: 2633
allele frequency: 2.193106665111863e-2
allele num: 120058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-5_668-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-5_342-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-5_687-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-5_117-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-5_687-3delCTT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-5_342-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-5_762-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-5_342-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-5_117-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-5_574-3delCTT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-5_762-3delCTT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-5_342-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-5_342-3delCTT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-5_439-3delCTT
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 11027
  bin: 3.25e1
  variant carriers: 312
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 2.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 271
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 310
genotype quality: GenotypeQuality
hgvs: c.687-5_687-3delCTT
num of homozygotes: 42
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: TTTC
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-49248842-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248842
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248842
    reference: chr 17
allele count: 1
allele frequency: 8.660108078148815e-6
allele num: 115472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.342-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.574-6T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.117-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.342-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.687-6T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.762-6T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.342-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.668-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.762-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.439-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.687-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.342-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.342-6T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.117-6T>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.687-6T>C
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-49248853-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248853
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248853
    reference: chr 17
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.122T>C
  hgvsp: ENSP00000376880.3:p.Ile41Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.347T>C
  hgvsp: ENSP00000426976.2:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.347T>C
  hgvsp: ENSP00000421064.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.347T>C
  hgvsp: ENSP00000376886.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.692T>C
  hgvsp: ENSP00000376889.2:p.Ile231Thr
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.673T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.444T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.692T>C
  hgvsp: ENSP00000376894.3:p.Ile231Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.347T>C
  hgvsp: ENSP00000426901.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.347T>C
  hgvsp: ENSP00000425581.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.767T>C
  hgvsp: ENSP00000451932.1:p.Ile256Thr
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.767T>C
  hgvsp: ENSP00000477284.1:p.Ile256Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.122T>C
  hgvsp: ENSP00000376882.1:p.Ile41Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.579T>C
  hgvsp: ENST00000376392.6:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile231Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

17-49248866-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248866
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248866
    reference: chr 17
allele count: 36
allele frequency: 2.97441998810232e-4
allele num: 121032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.360T>C
  hgvsp: ENST00000512737.1:c.360T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.780T>C
  hgvsp: ENST00000555572.1:c.780T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.705T>C
  hgvsp: ENST00000393198.3:c.705T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.360T>C
  hgvsp: ENST00000514264.2:c.360T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.592T>C
  hgvsp: ENSP00000365572.6:p.Ter198ArgextTer6
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.360T>C
  hgvsp: ENST00000503064.1:c.360T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.686T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.780T>C
  hgvsp: ENST00000608447.1:c.780T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.135T>C
  hgvsp: ENST00000393185.1:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.135T>C
  hgvsp: ENST00000393183.3:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.457T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.360T>C
  hgvsp: ENST00000393190.1:c.360T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.705T>C
  hgvsp: ENST00000393193.2:c.705T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.360T>C
  hgvsp: ENST00000513177.1:c.360T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11387
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15946
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ter198ArgextTer6
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

17-49248873-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248873
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248873
    reference: chr 17
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.142G>A
  hgvsp: ENSP00000376880.3:p.Val48Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.367G>A
  hgvsp: ENSP00000426901.1:p.Val123Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.142G>A
  hgvsp: ENSP00000376882.1:p.Val48Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*5G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.787G>A
  hgvsp: ENSP00000451932.1:p.Val263Ile
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.367G>A
  hgvsp: ENSP00000421064.1:p.Val123Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.367G>A
  hgvsp: ENSP00000426976.2:p.Val123Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.712G>A
  hgvsp: ENSP00000376894.3:p.Val238Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.787G>A
  hgvsp: ENSP00000477284.1:p.Val263Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.464G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.367G>A
  hgvsp: ENSP00000376886.1:p.Val123Ile
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.693G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.712G>A
  hgvsp: ENSP00000376889.2:p.Val238Ile
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.367G>A
  hgvsp: ENSP00000425581.1:p.Val123Ile
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val238Ile
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-49248873-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248873
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248873
    reference: chr 17
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.712G>C
  hgvsp: ENSP00000376894.3:p.Val238Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.787G>C
  hgvsp: ENSP00000477284.1:p.Val263Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.367G>C
  hgvsp: ENSP00000425581.1:p.Val123Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.367G>C
  hgvsp: ENSP00000426901.1:p.Val123Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.712G>C
  hgvsp: ENSP00000376889.2:p.Val238Leu
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.142G>C
  hgvsp: ENSP00000376880.3:p.Val48Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.367G>C
  hgvsp: ENSP00000376886.1:p.Val123Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*5G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.693G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.787G>C
  hgvsp: ENSP00000451932.1:p.Val263Leu
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.367G>C
  hgvsp: ENSP00000426976.2:p.Val123Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.464G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.367G>C
  hgvsp: ENSP00000421064.1:p.Val123Leu
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.142G>C
  hgvsp: ENSP00000376882.1:p.Val48Leu
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11412
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val238Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-49248875-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248875
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248875
    reference: chr 17
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.789A>G
  hgvsp: ENST00000555572.1:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.369A>G
  hgvsp: ENST00000514264.2:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.714A>G
  hgvsp: ENST00000393193.2:c.714A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.369A>G
  hgvsp: ENST00000513177.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.144A>G
  hgvsp: ENST00000393183.3:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.714A>G
  hgvsp: ENST00000393198.3:c.714A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.369A>G
  hgvsp: ENST00000393190.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.369A>G
  hgvsp: ENST00000512737.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.144A>G
  hgvsp: ENST00000393185.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.466A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.789A>G
  hgvsp: ENST00000608447.1:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.369A>G
  hgvsp: ENST00000503064.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.695A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*7A>G
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11397
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val238Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

17-49248879-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248879
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248879
    reference: chr 17
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.148A>T
  hgvsp: ENSP00000376880.3:p.Ser50Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.718A>T
  hgvsp: ENSP00000376894.3:p.Ser240Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.373A>T
  hgvsp: ENSP00000426976.2:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.718A>T
  hgvsp: ENSP00000376889.2:p.Ser240Cys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.793A>T
  hgvsp: ENSP00000451932.1:p.Ser265Cys
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*11A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.699A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.373A>T
  hgvsp: ENSP00000425581.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.470A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.793A>T
  hgvsp: ENSP00000477284.1:p.Ser265Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.148A>T
  hgvsp: ENSP00000376882.1:p.Ser50Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.373A>T
  hgvsp: ENSP00000421064.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.373A>T
  hgvsp: ENSP00000376886.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.373A>T
  hgvsp: ENSP00000426901.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser240Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-49248883-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248883
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248883
    reference: chr 17
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.797C>G
  hgvsp: ENSP00000477284.1:p.Ala266Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.377C>G
  hgvsp: ENSP00000376886.1:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.377C>G
  hgvsp: ENSP00000426976.2:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.152C>G
  hgvsp: ENSP00000376880.3:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*15C>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.722C>G
  hgvsp: ENSP00000376889.2:p.Ala241Gly
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.703C>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.474C>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.152C>G
  hgvsp: ENSP00000376882.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.797C>G
  hgvsp: ENSP00000451932.1:p.Ala266Gly
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.722C>G
  hgvsp: ENSP00000376894.3:p.Ala241Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.377C>G
  hgvsp: ENSP00000426901.1:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.377C>G
  hgvsp: ENSP00000421064.1:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.377C>G
  hgvsp: ENSP00000425581.1:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala241Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-49248910-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248910
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248910
    reference: chr 17
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.730A>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.501A>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.824A>C
  hgvsp: ENSP00000477284.1:p.Lys275Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.404A>C
  hgvsp: ENSP00000426901.1:p.Lys135Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.749A>C
  hgvsp: ENSP00000376894.3:p.Lys250Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.404A>C
  hgvsp: ENSP00000425581.1:p.Lys135Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.404A>C
  hgvsp: ENSP00000421064.1:p.Lys135Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.404A>C
  hgvsp: ENSP00000426976.2:p.Lys135Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.824A>C
  hgvsp: ENSP00000451932.1:p.Lys275Thr
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.749A>C
  hgvsp: ENSP00000376889.2:p.Lys250Thr
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.404A>C
  hgvsp: ENSP00000376886.1:p.Lys135Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.179A>C
  hgvsp: ENSP00000376880.3:p.Lys60Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.179A>C
  hgvsp: ENSP00000376882.1:p.Lys60Thr
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*42A>C
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys250Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

17-49248911-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248911
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248911
    reference: chr 17
allele count: 2
allele frequency: 1.648424106554134e-5
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.731G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.405G>A
  hgvsp: ENST00000512737.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.405G>A
  hgvsp: ENST00000513177.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.405G>A
  hgvsp: ENST00000393190.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.750G>A
  hgvsp: ENST00000393193.2:c.750G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.405G>A
  hgvsp: ENST00000514264.2:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.750G>A
  hgvsp: ENST00000393198.3:c.750G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*43G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.825G>A
  hgvsp: ENST00000608447.1:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.180G>A
  hgvsp: ENST00000393183.3:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.180G>A
  hgvsp: ENST00000393185.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.502G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.825G>A
  hgvsp: ENST00000555572.1:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.405G>A
  hgvsp: ENST00000503064.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys250Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

17-49248921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248921
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248921
    reference: chr 17
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.835C>T
  hgvsp: ENST00000608447.1:c.835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.512C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*53C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.760C>T
  hgvsp: ENST00000393198.3:c.760C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.741C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.415C>T
  hgvsp: ENST00000512737.1:c.415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.190C>T
  hgvsp: ENST00000393183.3:c.190C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.760C>T
  hgvsp: ENST00000393193.2:c.760C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.835C>T
  hgvsp: ENST00000555572.1:c.835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.415C>T
  hgvsp: ENST00000514264.2:c.415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.190C>T
  hgvsp: ENST00000393185.1:c.190C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.415C>T
  hgvsp: ENST00000513177.1:c.415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.415C>T
  hgvsp: ENST00000393190.1:c.415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.415C>T
  hgvsp: ENST00000503064.1:c.415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu254Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

17-49248922-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248922
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248921
    reference: chr 17
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.418delG
  hgvsp: ENSP00000426976.2:p.Val140LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.193delG
  hgvsp: ENSP00000376882.1:p.Val65LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.418delG
  hgvsp: ENSP00000425581.1:p.Val140LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.838delG
  hgvsp: ENSP00000451932.1:p.Val280LeufsTer49
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.763delG
  hgvsp: ENSP00000376894.3:p.Val255LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.418delG
  hgvsp: ENSP00000376886.1:p.Val140LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.744delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.193delG
  hgvsp: ENSP00000376880.3:p.Val65LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.418delG
  hgvsp: ENSP00000421064.1:p.Val140LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.838delG
  hgvsp: ENSP00000477284.1:p.Val280LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.763delG
  hgvsp: ENSP00000376889.2:p.Val255LeufsTer49
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.418delG
  hgvsp: ENSP00000426901.1:p.Val140LeufsTer49
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*56delG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.515delG
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val255LeufsTer49
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: TG
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

17-49248925-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248925
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248925
    reference: chr 17
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.419T>A
  hgvsp: ENSP00000426976.2:p.Val140Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.194T>A
  hgvsp: ENSP00000376882.1:p.Val65Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.419T>A
  hgvsp: ENSP00000376886.1:p.Val140Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.419T>A
  hgvsp: ENSP00000425581.1:p.Val140Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.745T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*57T>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.839T>A
  hgvsp: ENSP00000451932.1:p.Val280Asp
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.764T>A
  hgvsp: ENSP00000376889.2:p.Val255Asp
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.194T>A
  hgvsp: ENSP00000376880.3:p.Val65Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.764T>A
  hgvsp: ENSP00000376894.3:p.Val255Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.419T>A
  hgvsp: ENSP00000421064.1:p.Val140Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.419T>A
  hgvsp: ENSP00000426901.1:p.Val140Asp
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.516T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.839T>A
  hgvsp: ENSP00000477284.1:p.Val280Asp
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val255Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

17-49248925-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248925
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248925
    reference: chr 17
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.194T>C
  hgvsp: ENSP00000376880.3:p.Val65Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.419T>C
  hgvsp: ENSP00000421064.1:p.Val140Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.839T>C
  hgvsp: ENSP00000477284.1:p.Val280Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.419T>C
  hgvsp: ENSP00000376886.1:p.Val140Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.516T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.194T>C
  hgvsp: ENSP00000376882.1:p.Val65Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.745T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.839T>C
  hgvsp: ENSP00000451932.1:p.Val280Ala
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.764T>C
  hgvsp: ENSP00000376889.2:p.Val255Ala
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.419T>C
  hgvsp: ENSP00000425581.1:p.Val140Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.419T>C
  hgvsp: ENSP00000426976.2:p.Val140Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.764T>C
  hgvsp: ENSP00000376894.3:p.Val255Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.419T>C
  hgvsp: ENSP00000426901.1:p.Val140Ala
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*57T>C
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val255Ala
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-49248930-TACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248930
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248927
    reference: chr 17
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.426_428delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.426_428delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.846_848delCAA
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.426_428delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.426_428delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.201_203delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.771_773delCAA
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.846_848delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.201_203delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.752_754delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.523_525delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*64_*66delCAA
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.426_428delCAA
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  consequence: stop_gained
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.771_773delCAA
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr257_Lys258delinsTer
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: TACA
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

17-49248935-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248935
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248935
    reference: chr 17
allele count: 4
allele frequency: 3.297283038776049e-5
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.849G>C
  hgvsp: ENSP00000451932.1:p.Lys283Asn
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.429G>C
  hgvsp: ENSP00000426976.2:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.429G>C
  hgvsp: ENSP00000421064.1:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.429G>C
  hgvsp: ENSP00000425581.1:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*67G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.774G>C
  hgvsp: ENSP00000376889.2:p.Lys258Asn
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.204G>C
  hgvsp: ENSP00000376882.1:p.Lys68Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.849G>C
  hgvsp: ENSP00000477284.1:p.Lys283Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.774G>C
  hgvsp: ENSP00000376894.3:p.Lys258Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.526G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.204G>C
  hgvsp: ENSP00000376880.3:p.Lys68Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.429G>C
  hgvsp: ENSP00000426901.1:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.429G>C
  hgvsp: ENSP00000376886.1:p.Lys143Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.755G>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11445
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys258Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

17-49248947-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248947
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248947
    reference: chr 17
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.441T>A
  hgvsp: ENSP00000425581.1:p.His147Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.216T>A
  hgvsp: ENSP00000376880.3:p.His72Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.786T>A
  hgvsp: ENSP00000376889.2:p.His262Gln
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.861T>A
  hgvsp: ENSP00000477284.1:p.His287Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.441T>A
  hgvsp: ENSP00000421064.1:p.His147Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.786T>A
  hgvsp: ENSP00000376894.3:p.His262Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*79T>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.441T>A
  hgvsp: ENSP00000376886.1:p.His147Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.861T>A
  hgvsp: ENSP00000451932.1:p.His287Gln
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.441T>A
  hgvsp: ENSP00000426976.2:p.His147Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.216T>A
  hgvsp: ENSP00000376882.1:p.His72Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.538T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.441T>A
  hgvsp: ENSP00000426901.1:p.His147Gln
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.767T>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His262Gln
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

17-49248950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248950
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248950
    reference: chr 17
allele count: 3
allele frequency: 2.474145182839329e-5
allele num: 121254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.444C>T
  hgvsp: ENST00000514264.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.789C>T
  hgvsp: ENST00000393193.2:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.444C>T
  hgvsp: ENST00000503064.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.219C>T
  hgvsp: ENST00000393183.3:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.789C>T
  hgvsp: ENST00000393198.3:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.770C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.864C>T
  hgvsp: ENST00000608447.1:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*82C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.864C>T
  hgvsp: ENST00000555572.1:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.444C>T
  hgvsp: ENST00000513177.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.444C>T
  hgvsp: ENST00000512737.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.444C>T
  hgvsp: ENST00000393190.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.541C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.219C>T
  hgvsp: ENST00000393185.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp263Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

17-49248957-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248957
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248957
    reference: chr 17
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.796T>A
  hgvsp: ENSP00000376889.2:p.Tyr266Asn
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.451T>A
  hgvsp: ENSP00000425581.1:p.Tyr151Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.871T>A
  hgvsp: ENSP00000477284.1:p.Tyr291Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.451T>A
  hgvsp: ENSP00000421064.1:p.Tyr151Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.777T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.548T>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.226T>A
  hgvsp: ENSP00000376882.1:p.Tyr76Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.226T>A
  hgvsp: ENSP00000376880.3:p.Tyr76Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*89T>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.451T>A
  hgvsp: ENSP00000376886.1:p.Tyr151Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.871T>A
  hgvsp: ENSP00000451932.1:p.Tyr291Asn
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.796T>A
  hgvsp: ENSP00000376894.3:p.Tyr266Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.451T>A
  hgvsp: ENSP00000426901.1:p.Tyr151Asn
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.451T>A
  hgvsp: ENSP00000426976.2:p.Tyr151Asn
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr266Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

17-49248962-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248962
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248962
    reference: chr 17
allele count: 2
allele frequency: 1.651336757104876e-5
allele num: 121114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.231A>G
  hgvsp: ENST00000393183.3:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.456A>G
  hgvsp: ENST00000513177.1:c.456A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*94A>G
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.782A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.456A>G
  hgvsp: ENST00000393190.1:c.456A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.876A>G
  hgvsp: ENST00000555572.1:c.876A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.456A>G
  hgvsp: ENST00000514264.2:c.456A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.801A>G
  hgvsp: ENST00000393198.3:c.801A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.231A>G
  hgvsp: ENST00000393185.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.801A>G
  hgvsp: ENST00000393193.2:c.801A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.553A>G
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.456A>G
  hgvsp: ENST00000503064.1:c.456A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.876A>G
  hgvsp: ENST00000608447.1:c.876A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.456A>G
  hgvsp: ENST00000512737.1:c.456A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu267Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

17-49248966-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248966
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248966
    reference: chr 17
allele count: 142
allele frequency: 1.173320994182972e-3
allele num: 121024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*1G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000573262
  gene symbol: NME1-NME2
  hgvsc: ENST00000573262.1:n.786G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243678
  ensembl transcript: ENST00000570801
  gene symbol: NME1-NME2
  hgvsc: ENST00000570801.1:n.557G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*98G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18211
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11400
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 4.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
num of homozygotes: 1
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

17-49248979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248979
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248979
    reference: chr 17
allele count: 5
allele frequency: 4.141266896368937e-5
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*111C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18004
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

17-49248989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248989
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248989
    reference: chr 17
allele count: 2
allele frequency: 1.65892501658925e-5
allele num: 120560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*121C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*24C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-49248990-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248990
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248990
    reference: chr 17
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*25T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*122T>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11214
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

17-49248996-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248996
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248996
    reference: chr 17
allele count: 2
allele frequency: 1.660853678790898e-5
allele num: 120420
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*31A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*128A>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*31A>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16525
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ

17-49248997-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248997
    reference: chr 17
allele count: 515
allele frequency: 4.28132014298778e-3
allele num: 120290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*129C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*32C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10960
  bin: 3.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 12059
  bin: 2.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 4.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 3.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
num of homozygotes: 6
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-49248997-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248996
    reference: chr 17
allele count: 2
allele frequency: 1.662648599218555e-5
allele num: 120290
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*34delG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*34delG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*131delG
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*34delG
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: CG
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

17-49248999-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49248999
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49248999
    reference: chr 17
allele count: 2
allele frequency: 1.66220641279234e-5
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*131G>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*34G>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*34G>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12080
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-49249000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49249000
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49249000
    reference: chr 17
allele count: 7
allele frequency: 5.826923717244365e-5
allele num: 120132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*35C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*35C>T
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*132C>T
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10819
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-49249001-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49249001
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49249001
    reference: chr 17
allele count: 2
allele frequency: 1.6628421297682e-5
allele num: 120276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*133G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*36G>A
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15796
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

17-49249003-G-GGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49249003
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49249005
    reference: chr 17
allele count: 4
allele frequency: 3.327344113928263e-5
allele num: 120216
alternate allele: GGT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*140_*141dupGT
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*43_*44dupGT
  variant of: http://identifiers.org/hgnc/33531
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15606
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-49249015-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49249015
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49249015
    reference: chr 17
allele count: 7
allele frequency: 5.834013968296301e-5
allele num: 119986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000425581
  ensembl transcript: ENST00000513177
  gene symbol: NME1-NME2
  hgvsc: ENST00000513177.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426901
  ensembl transcript: ENST00000503064
  gene symbol: NME1-NME2
  hgvsc: ENST00000503064.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000365572
  ensembl transcript: ENST00000376392
  gene symbol: NME2
  hgvsc: ENST00000376392.6:c.*147G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376882
  ensembl transcript: ENST00000393185
  gene symbol: NME1-NME2
  hgvsc: ENST00000393185.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000421064
  ensembl transcript: ENST00000512737
  gene symbol: NME1-NME2
  hgvsc: ENST00000512737.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376880
  ensembl transcript: ENST00000393183
  gene symbol: NME1-NME2
  hgvsc: ENST00000393183.3:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000426976
  ensembl transcript: ENST00000514264
  gene symbol: NME1-NME2
  hgvsc: ENST00000514264.2:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376886
  ensembl transcript: ENST00000393190
  gene symbol: NME1-NME2
  hgvsc: ENST00000393190.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000376889
  ensembl transcript: ENST00000393193
  gene symbol: NME2
  hgvsc: ENST00000393193.2:c.*50G>C
  variant of: http://identifiers.org/hgnc/7850
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000376894
  ensembl transcript: ENST00000393198
  gene symbol: NME1-NME2
  hgvsc: ENST00000393198.3:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000243678
  ensembl protein: ENSP00000477284
  ensembl transcript: ENST00000608447
  gene symbol: NME1-NME2
  hgvsc: ENST00000608447.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/33531
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011052
  ensembl protein: ENSP00000451932
  ensembl transcript: ENST00000555572
  gene symbol: NME2
  hgvsc: ENST00000555572.1:c.*50G>C
  variant of: http://identifiers.org/hgnc/7850
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14169
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13153
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

17-49257908-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49257908
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49257908
    reference: chr 17
allele count: 1
allele frequency: 4.444444444444445e-5
allele num: 22500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000403946
  ensembl transcript: ENST00000415868
  gene symbol: MBTD1
  hgvsc: ENST00000415868.1:c.*29G>A
  variant of: http://identifiers.org/hgnc/19866
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000468304
  ensembl transcript: ENST00000586178
  gene symbol: MBTD1
  hgvsc: ENST00000586178.1:c.*29G>A
  variant of: http://identifiers.org/hgnc/19866
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 252
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

17-49257915-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49257915
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49257915
    reference: chr 17
allele count: 1
allele frequency: 4.394445420987871e-5
allele num: 22756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000403946
  ensembl transcript: ENST00000415868
  gene symbol: MBTD1
  hgvsc: ENST00000415868.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/19866
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000468304
  ensembl transcript: ENST00000586178
  gene symbol: MBTD1
  hgvsc: ENST00000586178.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/19866
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3683
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2358
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

17-49257916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49257916
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 49257916
    reference: chr 17
allele count: 6
allele frequency: 2.62628031165193e-4
allele num: 22846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000403946
  ensembl transcript: ENST00000415868
  gene symbol: MBTD1
  hgvsc: ENST00000415868.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/19866
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000011258
  ensembl protein: ENSP00000468304
  ensembl transcript: ENST00000586178
  gene symbol: MBTD1
  hgvsc: ENST00000586178.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/19866
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10752
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2615
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 8.939e0

DP
type: SiteQuality
SIO_000300: 1.733009e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e0

QD
type: SiteQuality
SIO_000300: 1.071e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.079e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeDepth
all individuals: 125
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2249
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.143e0

VQSLOD
type: SiteQuality
SIO_000300: -2.065e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.732961e6

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

QD
type: SiteQuality
SIO_000300: 1.38e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.274e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.167e0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2248
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28764
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.396e0

VQSLOD
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

QD
type: SiteQuality
SIO_000300: 1.077e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 4.572e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

DP
type: SiteQuality
SIO_000300: 1.733092e6

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 531
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.459e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.316e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 1.733027e6

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 979
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2249
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9118
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

DP
type: SiteQuality
SIO_000300: 1.73314e6

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 530
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10754
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 139
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2204
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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African
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 2.996973057212216e-5
allele num: 66734
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Other
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Latino
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African
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European (Finnish)
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South Asian
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East Asian
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
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European (Finnish)
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DP
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FS
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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African
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South Asian
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East Asian
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QD
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66656
num of homozygotes: 0

European (Finnish)
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Other
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African
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South Asian
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Latino
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East Asian
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ReadPosRankSum
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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DP
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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African
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South Asian
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Latino
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allele frequency: 0.0e0
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66598
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East Asian
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African
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South Asian
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Latino
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.50195253829979e-5
allele num: 66580
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African
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ReadPosRankSum
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66350
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East Asian
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South Asian
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allele frequency: 0.0e0
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African
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QD
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MQ
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VQSLOD
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DP
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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FS
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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QD
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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South Asian
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64466
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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South Asian
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ReadPosRankSum
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QD
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FS
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VQSLOD
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DP
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MQ
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 64390
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 64022
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South Asian
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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DP
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MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.960159362549801e-5
allele num: 10040
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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East Asian
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Other
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European (Non-Finnish)
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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East Asian
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African
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QD
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Other
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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Latino
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African
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South Asian
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European (Non-Finnish)
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QD
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MQ
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MQRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.60225026607876e-5
allele num: 65770
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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Other
type: Population
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FS
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MQRankSum
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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QD
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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East Asian
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Latino
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Other
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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DP
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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Other
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ClippingRankSum
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DP
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QD
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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South Asian
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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FS
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QD
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele num: 66560
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East Asian
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European (Finnish)
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Latino
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African
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Other
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DP
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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DP
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MQRankSum
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MQ
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Latino
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Other
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ReadPosRankSum
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MQ
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QD
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DP
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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MQRankSum
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FS
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.766e1

BaseQRankSum
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SIO_000300: -1.801e0

ReadPosRankSum
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SIO_000300: -1.061e0

QD
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 3.867e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66696
num of homozygotes: 0

European (Finnish)
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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African
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Latino
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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Other
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InbreedingCoeff
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQ
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66692
num of homozygotes: 0

Other
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Latino
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European (Finnish)
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

Latino
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allele num: 11560
num of homozygotes: 0

African
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 2.595155709342561e-4
allele num: 11560
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 10394
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South Asian
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MQ
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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ClippingRankSum
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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African
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Latino
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European (Finnish)
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South Asian
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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African
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Latino
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Other
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European (Finnish)
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -2.255e0

QD
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SIO_000300: 1.317e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.636e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 1.940383e6

VQSLOD
type: SiteQuality
SIO_000300: -2.105e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.665e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 5.83e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.317e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

GenotypeDepth
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bin: 5.75e1
variant carriers: 13

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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variant carriers: 8

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 141

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.307063911580971e-4
allele num: 66592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 97
allele frequency: 1.46658602963411e-2
allele num: 6614
num of homozygotes: 1

Other
type: Population
allele count: 3
allele frequency: 3.325942350332594e-3
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.54e-1

MQ
type: SiteQuality
SIO_000300: 5.872e1

MQRankSum
type: SiteQuality
SIO_000300: 6.16e-1

FS
type: SiteQuality
SIO_000300: 1.164e0

QD
type: SiteQuality
SIO_000300: 1.288e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 1.938942e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.715e0

GenotypeDepth
all individuals: 497
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.517892584350755e-5
allele num: 66508
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.81e-1

FS
type: SiteQuality
SIO_000300: 5.825e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
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DP
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SIO_000300: 1.923396e6

ReadPosRankSum
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SIO_000300: -8.1e-2

BaseQRankSum
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SIO_000300: -2.447e0

MQRankSum
type: SiteQuality
SIO_000300: -9.84e-1

MQ
type: SiteQuality
SIO_000300: 5.814e1

QD
type: SiteQuality
SIO_000300: 9.58e0

GenotypeDepth
all individuals: 495
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66470
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.248595330253465e-4
allele num: 16018
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.858e0

MQ
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VQSLOD
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MQRankSum
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QD
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4771
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.240639041437844e-5
allele num: 16024
num of homozygotes: 0

InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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SIO_000300: 5.747e1

QD
type: SiteQuality
SIO_000300: 1.882e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.926782273603083e-4
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
type: SiteQuality
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DP
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BaseQRankSum
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SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 6.45e-1

MQ
type: SiteQuality
SIO_000300: 5.654e1

GenotypeDepth
all individuals: 142
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variant carriers: 7

GenotypeQuality
all individuals: 18
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7691
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 569
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GenotypeQuality
all individuals: 282
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GenotypeQuality
all individuals: 613
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GenotypeQuality
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GenotypeQuality
all individuals: 4700
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GenotypeQuality
all individuals: 944
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GenotypeQuality
all individuals: 756
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GenotypeQuality
all individuals: 1370
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GenotypeQuality
all individuals: 2243
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GenotypeQuality
all individuals: 9948
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variant carriers: 506

African
type: Population
allele count: 441
allele frequency: 4.251831854994215e-2
allele num: 10372
num of homozygotes: 6

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.038322487346348e-5
allele num: 66384
num of homozygotes: 0

Latino
type: Population
allele count: 52
allele frequency: 4.513105363652144e-3
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 7.569067743156302e-4
allele num: 15854
num of homozygotes: 0

QD
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BaseQRankSum
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MQ
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SIO_000300: 5.936e1

DP
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FS
type: SiteQuality
SIO_000300: 7.07e-1

ClippingRankSum
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VQSLOD
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MQRankSum
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SIO_000300: 3.81e-1

ReadPosRankSum
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SIO_000300: 5.17e-1

InbreedingCoeff
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SIO_000300: 2.28e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.928268414963363e-4
allele num: 10372
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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SIO_000300: 7.07e-1

MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 2.28e-2

QD
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SIO_000300: 1.397e1

DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8644
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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FS
type: SiteQuality
SIO_000300: 6.65e-1

VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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DP
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MQ
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SIO_000300: 5.756e1

InbreedingCoeff
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SIO_000300: 1.3e-3

ReadPosRankSum
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SIO_000300: 5.79e-1

BaseQRankSum
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SIO_000300: -1.813e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 5
allele frequency: 5.784359093012494e-4
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15758
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507658907248824e-5
allele num: 66328
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.406e1

InbreedingCoeff
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SIO_000300: 1.0e-3

VQSLOD
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MQRankSum
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SIO_000300: -2.036e0

QD
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FS
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SIO_000300: 4.703e0

BaseQRankSum
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SIO_000300: 1.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.84e-1

DP
type: SiteQuality
SIO_000300: 1.873593e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1019
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 4
allele frequency: 3.857280617164899e-4
allele num: 10370
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66338
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VQSLOD
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QD
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ClippingRankSum
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DP
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MQRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.3e-3

ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.107482047718323e-4
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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Other
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
type: SiteQuality
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FS
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QD
type: SiteQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 416
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European (Non-Finnish)
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African
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South Asian
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East Asian
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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DP
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.987e1

East Asian
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allele num: 618
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Other
type: Population
allele count: 0
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allele num: 250
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European (Non-Finnish)
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allele frequency: 1.0351966873706e-4
allele num: 9660
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
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VQSLOD
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MQRankSum
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SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.687e1