19-52469487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469487
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469487
    reference: chr 19
allele count: 1
allele frequency: 9.199801284292259e-6
allele num: 108698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-20C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-20C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10157G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10157G>C
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7761
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15001
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

19-52469489-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469489
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469489
    reference: chr 19
allele count: 1
allele frequency: 9.23924090396733e-6
allele num: 108234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10155T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-22A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-22A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10155T>C
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9790
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7673
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14716
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-52469490-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469490
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469490
    reference: chr 19
allele count: 1
allele frequency: 9.240777703851557e-6
allele num: 108216
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-23A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10154T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-23A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10154T>G
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11797
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52469493-T-TATCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469493
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469497
    reference: chr 19
allele count: 1
allele frequency: 9.26251829347363e-6
allele num: 107962
alternate allele: TATCA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-30_239-27dupTGAT
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-30_131-27dupTGAT
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10150_103-10147dupATCA
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10150_75-10147dupATCA
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11793
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2696
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-52469503-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469503
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469503
    reference: chr 19
allele count: 4
allele frequency: 3.734966758795847e-5
allele num: 107096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10141A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-36T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-36T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10141A>G
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11363
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13173
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2692
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11787
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-52469504-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469504
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469504
    reference: chr 19
allele count: 2
allele frequency: 1.867762420620097e-5
allele num: 107080
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-37A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10140T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10140T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-37A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11359
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2695
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3814
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11785
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7478
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-52469517-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52469517
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52469517
    reference: chr 19
allele count: 4
allele frequency: 3.833547373061663e-5
allele num: 104342
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-10127T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.239-50A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-10127T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.131-50A>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11770
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3680
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

19-52471783-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471783
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471783
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7861T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7861T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.478A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+48A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+48A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+48A>C
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41335
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-52471785-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471785
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471785
    reference: chr 19
allele count: 25168
allele frequency: 2.078145126663804e-1
allele num: 121108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.476A>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+46A>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+46A>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7859T>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7859T>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+46A>T
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 2.25e1
  variant carriers: 520
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 2.75e1
  variant carriers: 1059
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 2264
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 4.25e1
  variant carriers: 2586
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 7.75e1
  variant carriers: 686
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 4.75e1
  variant carriers: 2514
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 6.25e1
  variant carriers: 1397
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 2427
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 8.25e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 9.75e1
  variant carriers: 1677
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 6.75e1
  variant carriers: 1142
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 3.25e1
  variant carriers: 1784
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 7.25e1
  variant carriers: 906
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 8.75e1
  variant carriers: 426
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 5.75e1
  variant carriers: 1793
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.25e1
  variant carriers: 299
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 8.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 7.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 7
num of homozygotes: 2889
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

19-52471793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471793
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471793
    reference: chr 19
allele count: 2
allele frequency: 1.648559982854976e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.468C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+38C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7851G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7851G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+38C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+38C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-52471799-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471799
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471798
    reference: chr 19
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7843delC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+31delG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.461delG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7843delC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+31delG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+31delG
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2896
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: TC
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

19-52471813-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471813
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471813
    reference: chr 19
allele count: 41738
allele frequency: 3.441230789525757e-1
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7831T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7831T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.448A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+18A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 3.25e1
  variant carriers: 322
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 3.75e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 4.75e1
  variant carriers: 1341
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 4.25e1
  variant carriers: 921
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 6.25e1
  variant carriers: 2478
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 1830
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 9.25e1
  variant carriers: 1800
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 2.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 7.25e1
  variant carriers: 2621
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 8.25e1
  variant carriers: 2331
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 7.75e1
  variant carriers: 2541
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 5.75e1
  variant carriers: 2160
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.75e1
  variant carriers: 2026
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 6.75e1
  variant carriers: 2528
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 9.75e1
  variant carriers: 9718
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 9.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49833
  bin: 9.75e1
  variant carriers: 33313
num of homozygotes: 8279
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

19-52471822-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471822
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471820
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7817_103-7816delTC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7817_75-7816delTC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.437_438delGA
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+7_238+8delGA
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+7_130+8delGA
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+7_466+8delGA
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46389
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: c.238+7_238+8delGA
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: TTC
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-52471826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471826
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471826
    reference: chr 19
allele count: 6
allele frequency: 4.942176534545814e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7818C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.435G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.238+5G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.466+5G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7818C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.130+5G>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46389
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: c.238+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-52471844-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471844
    reference: chr 19
allele count: 6
allele frequency: 4.942257952916756e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7800A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.117T>C
  hgvsp: ENST00000601430.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.225T>C
  hgvsp: ENST00000243644.4:c.225T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.417T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7800A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.453T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46387
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser75Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-52471848-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471848
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471848
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7796T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.113A>C
  hgvsp: ENSP00000470930.1:p.His38Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7796T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.221A>C
  hgvsp: ENSP00000243644.3:p.His74Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.413A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.449A>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46387
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His74Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

19-52471851-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471851
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.110T>C
  hgvsp: ENSP00000470930.1:p.Ile37Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.446T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7793A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.218T>C
  hgvsp: ENSP00000243644.3:p.Ile73Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7793A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.410T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile73Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-52471858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471858
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471858
    reference: chr 19
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.211G>A
  hgvsp: ENSP00000243644.3:p.Asp71Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7786C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.403G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.103G>A
  hgvsp: ENSP00000470930.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.439G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7786C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46387
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp71Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-52471862-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471862
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471862
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.99T>A
  hgvsp: ENST00000601430.1:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.207T>A
  hgvsp: ENST00000243644.4:c.207T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.399T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.435T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7782A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7782A>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile69Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

19-52471863-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471863
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471863
    reference: chr 19
allele count: 196
allele frequency: 1.614417738826747e-3
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.434T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.98T>C
  hgvsp: ENSP00000470930.1:p.Ile33Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.206T>C
  hgvsp: ENSP00000243644.3:p.Ile69Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7781A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7781A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.398T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 9.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46425
  bin: 9.75e1
  variant carriers: 194
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile69Thr
num of homozygotes: 2
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-52471872-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471872
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471872
    reference: chr 19
allele count: 25232
allele frequency: 2.078521178970954e-1
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.389T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.197T>C
  hgvsp: ENSP00000469594.1:p.Leu66Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.425T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.89T>C
  hgvsp: ENSP00000470930.1:p.Leu30Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.197T>C
  hgvsp: ENSP00000243644.3:p.Leu66Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7772A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7772A>G
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19808
  bin: 9.75e1
  variant carriers: 17584
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 6.25e1
  variant carriers: 268
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 847
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 5.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.25e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 4.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.25e1
  variant carriers: 951
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 7.75e1
  variant carriers: 628
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 8.25e1
  variant carriers: 675
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 6.75e1
  variant carriers: 363
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 5.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46864
  bin: 9.75e1
  variant carriers: 22307
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu66Pro
num of homozygotes: 2914
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

19-52471872-AGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471872
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471870
    reference: chr 19
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.387_388delAC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.87_88delAC
  hgvsp: ENSP00000470930.1:p.Gln29HisfsTer5
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.423_424delAC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.195_196delAC
  hgvsp: ENSP00000469594.1:p.Gln65HisfsTer?
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7771_103-7770delGT
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7771_75-7770delGT
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.195_196delAC
  hgvsp: ENSP00000243644.3:p.Gln65HisfsTer5
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46864
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln65HisfsTer5
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: AGT
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-52471873-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471873
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471873
    reference: chr 19
allele count: 12
allele frequency: 9.884515905833511e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.388C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.196C>T
  hgvsp: ENST00000243644.4:c.196C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.196C>T
  hgvsp: ENST00000594929.1:c.196C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7771G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.88C>T
  hgvsp: ENST00000601430.1:c.88C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.424C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7771G>A
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5191
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu66Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52471876-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471876
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.193C>A
  hgvsp: ENSP00000243644.3:p.Gln65Lys
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7768G>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.421C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.193C>A
  hgvsp: ENSP00000469594.1:p.Gln65Lys
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.85C>A
  hgvsp: ENSP00000470930.1:p.Gln29Lys
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7768G>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.385C>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln65Lys
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-52471889-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471889
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471889
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.372G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.180G>A
  hgvsp: ENST00000594929.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.72G>A
  hgvsp: ENST00000601430.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.408G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.180G>A
  hgvsp: ENST00000597788.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7755C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.180G>A
  hgvsp: ENST00000243644.4:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7755C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40864
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu60Leu
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-52471907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471907
    reference: chr 19
allele count: 11
allele frequency: 9.06065698000066e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.54G>A
  hgvsp: ENST00000601430.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.162G>A
  hgvsp: ENST00000597788.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7737C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.354G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.162G>A
  hgvsp: ENST00000243644.4:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7737C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.162G>A
  hgvsp: ENST00000594929.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.390G>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro54Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

19-52471908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471908
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471908
    reference: chr 19
allele count: 4
allele frequency: 3.294784356363876e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.161C>T
  hgvsp: ENSP00000243644.3:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.161C>T
  hgvsp: ENSP00000469594.1:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7736G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.53C>T
  hgvsp: ENSP00000470930.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.161C>T
  hgvsp: ENSP00000470066.1:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.389C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7736G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.353C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro54Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

19-52471917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471917
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471917
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.152C>T
  hgvsp: ENSP00000470066.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.344C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.44C>T
  hgvsp: ENSP00000470930.1:p.Ala15Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.380C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.152C>T
  hgvsp: ENSP00000243644.3:p.Ala51Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7727G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.152C>T
  hgvsp: ENSP00000469594.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7727G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.152C>T
  hgvsp: ENSP00000472104.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala51Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

19-52471924-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471924
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471924
    reference: chr 19
allele count: 4
allele frequency: 3.295110056675893e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.145T>A
  hgvsp: ENSP00000243644.3:p.Tyr49Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7720A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.373T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.145T>A
  hgvsp: ENSP00000470066.1:p.Tyr49Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.145T>A
  hgvsp: ENSP00000472104.1:p.Tyr49Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.337T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.37T>A
  hgvsp: ENSP00000470930.1:p.Tyr13Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.145T>A
  hgvsp: ENSP00000469594.1:p.Tyr49Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7720A>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40859
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Tyr49Asn
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52471928-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471928
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471929
    reference: chr 19
allele count: 7
allele frequency: 5.766442599182813e-5
allele num: 121392
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7715dupG
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-3dupC
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7715dupG
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: c.143-3dupC
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

19-52471932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471932
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471932
    reference: chr 19
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7712C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-6G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7712C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-6G>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2933
  bin: 9.25e1
  variant carriers: 0
hgvs: c.143-6G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-52471933-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471933
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471933
    reference: chr 19
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-7T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7711A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7711A>G
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: c.143-7T>C
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

19-52471934-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471934
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471934
    reference: chr 19
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7710T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-8A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7710T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-8A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: c.143-8A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

19-52471944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471944
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471944
    reference: chr 19
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7700T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7700T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-18A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-18A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-52471948-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471948
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471948
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7696G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7696G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-22C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-22C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40852
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2646
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

19-52471954-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471954
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471954
    reference: chr 19
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7690A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7690A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-28T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-28T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

19-52471956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471956
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471956
    reference: chr 19
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7688A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7688A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-30T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-30T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

19-52471961-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471961
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471961
    reference: chr 19
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7683T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7683T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-35A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-35A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-52471965-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471965
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471965
    reference: chr 19
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7679A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7679A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-39T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-39T>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52471974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471974
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471974
    reference: chr 19
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7670G>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7670G>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-48C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-48C>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

19-52471977-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52471977
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52471977
    reference: chr 19
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.143-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.143-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.35-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7667A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.335-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.371-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.143-51T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7667A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.143-51T>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

19-52472210-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472210
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472210
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7434G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7434G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+48C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+48C>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25149
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

19-52472211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472211
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472211
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7433G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7433G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+47C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+47C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51549
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

19-52472217-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472217
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472217
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7427G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7427G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+41C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+41C>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51550
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP

19-52472243-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472243
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7401G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7401G>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+15C>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+15C>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

19-52472250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472250
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472250
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7394G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+8C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7394G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+8C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: c.142+8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

19-52472255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472255
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472255
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.142+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.142+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.142+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7389C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.142+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7389C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.370+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.334+3G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.34+3G>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: c.142+3G>A
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-52472265-C-CACCAGGTTGCCACAGCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472265
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472282
    reference: chr 19
allele count: 4
allele frequency: 3.294621530351701e-5
allele num: 121410
alternate allele: CACCAGGTTGCCACAGCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsp: ENSP00000472104.1:p.Gly48AlafsTer?
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsp: ENSP00000469594.1:p.Gly48AlafsTer?
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsp: ENSP00000470930.1:p.Gly12AlafsTer56
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsp: ENSP00000470066.1:p.Gly48AlafsTer?
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsp: ENSP00000243644.3:p.Gly48AlafsTer56
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25151
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly48AlafsTer56
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

19-52472271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472271
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472271
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.129C>T
  hgvsp: ENST00000593596.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.129C>T
  hgvsp: ENST00000594929.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.21C>T
  hgvsp: ENST00000601430.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.321C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.129C>T
  hgvsp: ENST00000243644.4:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.129C>T
  hgvsp: ENST00000597788.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7373G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.357C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7373G>A
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51554
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn43Asn
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-52472274-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472274
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472274
    reference: chr 19
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.126C>A
  hgvsp: ENSP00000469594.1:p.Ser42Arg
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.126C>A
  hgvsp: ENSP00000470066.1:p.Ser42Arg
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.126C>A
  hgvsp: ENSP00000243644.3:p.Ser42Arg
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7370G>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.354C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.18C>A
  hgvsp: ENSP00000470930.1:p.Ser6Arg
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.126C>A
  hgvsp: ENSP00000472104.1:p.Ser42Arg
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.318C>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7370G>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25151
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser42Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

19-52472277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472277
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472277
    reference: chr 19
allele count: 7
allele frequency: 5.765872623636783e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7367G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7367G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.123C>T
  hgvsp: ENST00000594929.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.123C>T
  hgvsp: ENST00000597788.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.123C>T
  hgvsp: ENST00000243644.4:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.15C>T
  hgvsp: ENST00000601430.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.123C>T
  hgvsp: ENST00000593596.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.315C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.351C>T
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25154
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr41Tyr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-52472288-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472288
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472288
    reference: chr 19
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.4T>C
  hgvsp: ENST00000601430.1:c.4T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7356A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.112T>C
  hgvsp: ENST00000597788.1:c.112T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7356A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.112T>C
  hgvsp: ENST00000594929.1:c.112T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.340T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.112T>C
  hgvsp: ENST00000243644.4:c.112T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.304T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.112T>C
  hgvsp: ENST00000593596.1:c.112T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25148
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu38Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-52472289-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472289
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472289
    reference: chr 19
allele count: 555
allele frequency: 4.571362677912493e-3
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.111G>A
  hgvsp: ENSP00000472104.1:p.Met37Ile
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.111G>A
  hgvsp: ENSP00000243644.3:p.Met37Ile
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.3G>A
  hgvsp: ENSP00000470930.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7355C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7355C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.111G>A
  hgvsp: ENSP00000470066.1:p.Met37Ile
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.339G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.303G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.111G>A
  hgvsp: ENSP00000469594.1:p.Met37Ile
  variant of: http://identifiers.org/hgnc/16656
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25203
  bin: 9.75e1
  variant carriers: 512
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 26
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-52472295-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472295
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472295
    reference: chr 19
allele count: 41731
allele frequency: 3.43798915819479e-1
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7349A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.105T>C
  hgvsp: ENST00000594929.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-4T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.105T>C
  hgvsp: ENST00000593596.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.105T>C
  hgvsp: ENST00000243644.4:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7349A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.105T>C
  hgvsp: ENST00000597788.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.333T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.297T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 8.75e1
  variant carriers: 508
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 5.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 6.25e1
  variant carriers: 308
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 4.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 5.75e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 314
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 7.75e1
  variant carriers: 450
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 424
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 4.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31718
  bin: 9.75e1
  variant carriers: 29842
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.25e1
  variant carriers: 577
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp35Asp
num of homozygotes: 8274
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-52472299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472299
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472299
    reference: chr 19
allele count: 12
allele frequency: 9.884027411702688e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.293G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.101G>A
  hgvsp: ENSP00000470066.1:p.Arg34Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.101G>A
  hgvsp: ENSP00000472104.1:p.Arg34Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.329G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.101G>A
  hgvsp: ENSP00000243644.3:p.Arg34Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.101G>A
  hgvsp: ENSP00000469594.1:p.Arg34Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7345C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7345C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg34Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

19-52472300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472300
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472300
    reference: chr 19
allele count: 167
allele frequency: 1.375527148128624e-3
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.100C>T
  hgvsp: ENSP00000469594.1:p.Arg34Trp
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.100C>T
  hgvsp: ENSP00000470066.1:p.Arg34Trp
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7344G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.100C>T
  hgvsp: ENSP00000472104.1:p.Arg34Trp
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.328C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7344G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.292C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.100C>T
  hgvsp: ENSP00000243644.3:p.Arg34Trp
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 9.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg34Trp
num of homozygotes: 2
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-52472303-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472303
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472303
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.97T>C
  hgvsp: ENSP00000469594.1:p.Tyr33His
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.97T>C
  hgvsp: ENSP00000243644.3:p.Tyr33His
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-12T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.325T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7341A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7341A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.97T>C
  hgvsp: ENSP00000470066.1:p.Tyr33His
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.289T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.97T>C
  hgvsp: ENSP00000472104.1:p.Tyr33His
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr33His
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52472304-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472304
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472304
    reference: chr 19
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.96G>A
  hgvsp: ENST00000597788.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.96G>A
  hgvsp: ENST00000594929.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7340C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.288G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.324G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.96G>A
  hgvsp: ENST00000593596.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.96G>A
  hgvsp: ENST00000243644.4:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7340C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu32Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

19-52472309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472309
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472309
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.283G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-18G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.91G>A
  hgvsp: ENSP00000470066.1:p.Asp31Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.319G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.91G>A
  hgvsp: ENSP00000472104.1:p.Asp31Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.91G>A
  hgvsp: ENSP00000469594.1:p.Asp31Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.91G>A
  hgvsp: ENSP00000243644.3:p.Asp31Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7335C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7335C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp31Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-52472321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472321
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472321
    reference: chr 19
allele count: 7
allele frequency: 5.765777638666952e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.307G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.79G>A
  hgvsp: ENSP00000469594.1:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.271G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7323C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.79G>A
  hgvsp: ENSP00000243644.3:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.79G>A
  hgvsp: ENSP00000470066.1:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.79G>A
  hgvsp: ENSP00000472104.1:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7323C>T
  variant of: http://identifiers.org/hgnc/48598
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala27Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

19-52472322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472322
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472322
    reference: chr 19
allele count: 216
allele frequency: 1.779124934106484e-3
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-31C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.270C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.78C>T
  hgvsp: ENST00000243644.4:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.78C>T
  hgvsp: ENST00000593596.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.306C>T
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7322G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7322G>A
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.78C>T
  hgvsp: ENST00000597788.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.78C>T
  hgvsp: ENST00000594929.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.75e1
  variant carriers: 204
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly26Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

19-52472341-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472341
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7303T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.287A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.59A>C
  hgvsp: ENSP00000472104.1:p.Glu20Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.59A>C
  hgvsp: ENSP00000469594.1:p.Glu20Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.59A>C
  hgvsp: ENSP00000470066.1:p.Glu20Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-50A>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7303T>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.59A>C
  hgvsp: ENSP00000243644.3:p.Glu20Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.251A>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3162
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu20Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-52472341-TCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472339
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7301_103-7300delCC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-52_-51delGG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.249_250delGG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.285_286delGG
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.57_58delGG
  hgvsp: ENSP00000470066.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.57_58delGG
  hgvsp: ENSP00000472104.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7301_75-7300delCC
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.57_58delGG
  hgvsp: ENSP00000469594.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.57_58delGG
  hgvsp: ENSP00000243644.3:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Trp19Ter
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: TCC
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum

19-52472343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472343
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472343
    reference: chr 19
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7301C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.249G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7301C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.57G>A
  hgvsp: ENSP00000469594.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.285G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.57G>A
  hgvsp: ENSP00000243644.3:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.57G>A
  hgvsp: ENSP00000470066.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.57G>A
  hgvsp: ENSP00000472104.1:p.Trp19Ter
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39532
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2689
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp19Ter
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

19-52472353-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472353
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472353
    reference: chr 19
allele count: 21
allele frequency: 1.730445960644715e-4
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.47A>G
  hgvsp: ENSP00000469594.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.47A>G
  hgvsp: ENSP00000470066.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.47A>G
  hgvsp: ENSP00000243644.3:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.47A>G
  hgvsp: ENSP00000472104.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.275A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7291T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-62A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7291T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.239A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6666
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6955
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp16Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-52472356-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472356
    reference: chr 19
allele count: 1095
allele frequency: 9.213294068153135e-3
allele num: 118850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.236T>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.44T>G
  hgvsp: ENSP00000469594.1:p.Val15Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7288A>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.272T>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-65T>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7288A>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.44T>G
  hgvsp: ENSP00000470066.1:p.Val15Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.44T>G
  hgvsp: ENSP00000472104.1:p.Val15Gly
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.44T>G
  hgvsp: ENSP00000243644.3:p.Val15Gly
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6626
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 9.75e1
  variant carriers: 924
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 8.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 7.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 37611
  bin: 9.75e1
  variant carriers: 821
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 8
hgvs: p.Val15Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

19-52472366-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472366
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472366
    reference: chr 19
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.34G>A
  hgvsp: ENSP00000472104.1:p.Asp12Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.34G>A
  hgvsp: ENSP00000243644.3:p.Asp12Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7278C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.34G>A
  hgvsp: ENSP00000470066.1:p.Asp12Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-75G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7278C>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.34G>A
  hgvsp: ENSP00000469594.1:p.Asp12Asn
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.262G>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.226G>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp12Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

19-52472371-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472371
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472371
    reference: chr 19
allele count: 3
allele frequency: 2.474716644944154e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.29T>A
  hgvsp: ENSP00000470066.1:p.Leu10Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.29T>A
  hgvsp: ENSP00000469594.1:p.Leu10Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7273A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.29T>A
  hgvsp: ENSP00000472104.1:p.Leu10Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.29T>A
  hgvsp: ENSP00000243644.3:p.Leu10Gln
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-80T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7273A>T
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.257T>A
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.221T>A
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38996
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu10Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-52472375-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472375
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472375
    reference: chr 19
allele count: 12
allele frequency: 9.903277985013039e-5
allele num: 121172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.25A>G
  hgvsp: ENSP00000470066.1:p.Thr9Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7269T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.25A>G
  hgvsp: ENSP00000472104.1:p.Thr9Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-84A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.25A>G
  hgvsp: ENSP00000469594.1:p.Thr9Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.25A>G
  hgvsp: ENSP00000243644.3:p.Thr9Ala
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.253A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7269T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.217A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5796
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6830
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr9Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52472378-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472378
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472378
    reference: chr 19
allele count: 2
allele frequency: 1.65196418541646e-5
allele num: 121068
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7266T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.22A>G
  hgvsp: ENSP00000469594.1:p.Ile8Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-87A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7266T>C
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.22A>G
  hgvsp: ENSP00000470066.1:p.Ile8Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.22A>G
  hgvsp: ENSP00000243644.3:p.Ile8Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.22A>G
  hgvsp: ENSP00000472104.1:p.Ile8Val
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.250A>G
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.214A>G
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38989
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile8Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

19-52472381-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52472381
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52472381
    reference: chr 19
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000595010
  gene symbol: HCCAT3
  hgvsc: ENST00000595010.1:n.75-7263A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470066
  ensembl transcript: ENST00000597788
  gene symbol: ZNF350
  hgvsc: ENST00000597788.1:c.19T>C
  hgvsp: ENSP00000470066.1:p.Ser7Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000469594
  ensembl transcript: ENST00000594929
  gene symbol: ZNF350
  hgvsc: ENST00000594929.1:c.19T>C
  hgvsp: ENSP00000469594.1:p.Ser7Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000472104
  ensembl transcript: ENST00000593596
  gene symbol: ZNF350
  hgvsc: ENST00000593596.1:c.19T>C
  hgvsp: ENSP00000472104.1:p.Ser7Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000243644
  ensembl transcript: ENST00000243644
  gene symbol: ZNF350
  hgvsc: ENST00000243644.4:c.19T>C
  hgvsp: ENSP00000243644.3:p.Ser7Pro
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000256683
  ensembl protein: ENSP00000470930
  ensembl transcript: ENST00000601430
  gene symbol: ZNF350
  hgvsc: ENST00000601430.1:c.-90T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000598254
  gene symbol: ZNF350
  hgvsc: ENST00000598254.1:n.211T>C
  variant of: http://identifiers.org/hgnc/16656
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269235
  ensembl transcript: ENST00000600253
  gene symbol: HCCAT3
  hgvsc: ENST00000600253.1:n.103-7263A>G
  variant of: http://identifiers.org/hgnc/48598
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000256683
  ensembl transcript: ENST00000600703
  gene symbol: ZNF350
  hgvsc: ENST00000600703.1:n.247T>C
  variant of: http://identifiers.org/hgnc/16656
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser7Pro
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 11798
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4966
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.143641354071363e-4
allele num: 8744
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.489e1

DP
type: SiteQuality
SIO_000300: 2.075019e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.628187176397799e-5
allele num: 61418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.067899e6

QD
type: SiteQuality
SIO_000300: 9.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 6.04e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.237e0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.445e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
all individuals: 4952
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14752
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.221689413500554e-5
allele num: 10844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.067723e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.078e1

VQSLOD
type: SiteQuality
SIO_000300: -1.285e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 7644
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4949
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629885582032141e-5
allele num: 61354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.332e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.683e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 2.063398e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

MQ
type: SiteQuality
SIO_000300: 5.257e1

GenotypeQuality
all individuals: 4916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.5106196243637e-4
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 1.363e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.79e-1

DP
type: SiteQuality
SIO_000300: 2.041821e6

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61050
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.952743604764694e-4
allele num: 10242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.041606e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.331e1

VQSLOD
type: SiteQuality
SIO_000300: -1.833e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

GenotypeQuality
all individuals: 6183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1459
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.624671916010499e-3
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.452783909737552e-4
allele num: 8154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59836
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.99983e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.638e0

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 3.036405e6

QD
type: SiteQuality
SIO_000300: 1.072e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.437e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 46314
bin: 9.75e1
variant carriers: 21818

GenotypeQuality
all individuals: 1843
bin: 6.75e1
variant carriers: 30

GenotypeQuality
all individuals: 2486
bin: 6.25e1
variant carriers: 34

GenotypeQuality
all individuals: 1363
bin: 8.75e1
variant carriers: 59

GenotypeQuality
all individuals: 2123
bin: 9.25e1
variant carriers: 79

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 10

African
type: Population
allele count: 3956
allele frequency: 3.806774441878368e-1
allele num: 10392
num of homozygotes: 735

South Asian
type: Population
allele count: 4437
allele frequency: 2.690069116042197e-1
allele num: 16494
num of homozygotes: 603

Other
type: Population
allele count: 198
allele frequency: 2.185430463576159e-1
allele num: 906
num of homozygotes: 15

European (Finnish)
type: Population
allele count: 1696
allele frequency: 2.575159429092013e-1
allele num: 6586
num of homozygotes: 211

European (Non-Finnish)
type: Population
allele count: 10970
allele frequency: 1.647641934514869e-1
allele num: 66580
num of homozygotes: 942

Latino
type: Population
allele count: 2009
allele frequency: 1.741202981452591e-1
allele num: 11538
num of homozygotes: 166

East Asian
type: Population
allele count: 1902
allele frequency: 2.208546214584301e-1
allele num: 8612
num of homozygotes: 217

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.747e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.95e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

DP
type: SiteQuality
SIO_000300: 3.128903e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43501
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

VQSLOD
type: SiteQuality
SIO_000300: -9.589e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.053e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.148127e6

QD
type: SiteQuality
SIO_000300: 1.357e1

FS
type: SiteQuality
SIO_000300: 3.593e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.742e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43512
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

DP
type: SiteQuality
SIO_000300: 3.150182e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.396e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-2

FS
type: SiteQuality
SIO_000300: 3.277e0

MQ
type: SiteQuality
SIO_000300: 5.585e1

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1032
bin: 8.75e1
variant carriers: 20

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1634
bin: 8.25e1
variant carriers: 24

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1517
bin: 7.75e1
variant carriers: 20

Latino
type: Population
allele count: 2906
allele frequency: 2.514710972654898e-1
allele num: 11556
num of homozygotes: 370

South Asian
type: Population
allele count: 8898
allele frequency: 5.38946093276802e-1
allele num: 16510
num of homozygotes: 2464

African
type: Population
allele count: 6656
allele frequency: 6.396309821256967e-1
allele num: 10406
num of homozygotes: 2132

European (Finnish)
type: Population
allele count: 2318
allele frequency: 3.507869249394673e-1
allele num: 6608
num of homozygotes: 408

East Asian
type: Population
allele count: 2434
allele frequency: 2.823665893271461e-1
allele num: 8620
num of homozygotes: 328

Other
type: Population
allele count: 300
allele frequency: 3.311258278145696e-1
allele num: 906
num of homozygotes: 49

European (Non-Finnish)
type: Population
allele count: 18226
allele frequency: 2.733271347590054e-1
allele num: 66682
num of homozygotes: 2528

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

DP
type: SiteQuality
SIO_000300: 4.162989e6

VQSLOD
type: SiteQuality
SIO_000300: 4.96e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 2.04e1

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.89e-1

FS
type: SiteQuality
SIO_000300: 3.264e0

MQ
type: SiteQuality
SIO_000300: 5.532e1

QD
type: SiteQuality
SIO_000300: 1.733e1

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e0

MQRankSum
type: SiteQuality
SIO_000300: -2.888e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 3.88075e6

GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.39e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

MQ
type: SiteQuality
SIO_000300: 5.887e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
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SIO_000300: -2.925e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.880934e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1996
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990919171636647e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.283e1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQ
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SIO_000300: 5.977e1

BaseQRankSum
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SIO_000300: -1.982e0

FS
type: SiteQuality
SIO_000300: 1.243e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

DP
type: SiteQuality
SIO_000300: 3.881216e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

FS
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SIO_000300: 0.0e0

QD
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2140
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.35e-1

DP
type: SiteQuality
SIO_000300: 3.881233e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.438e0

QD
type: SiteQuality
SIO_000300: 1.23e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.881403e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.481e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 8.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.791e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1994
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
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African
type: Population
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Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
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FS
type: SiteQuality
SIO_000300: 7.863e0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
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SIO_000300: 5.972e1

InbreedingCoeff
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.246e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
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allele num: 16512
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East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
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Latino
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allele count: 16
allele frequency: 1.381931248920366e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 71
allele frequency: 6.822986738420142e-3
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Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 105
allele frequency: 1.573410855036413e-3
allele num: 66734
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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SIO_000300: 1.02e-2

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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allele count: 4446
allele frequency: 2.692587209302326e-1
allele num: 16512
num of homozygotes: 606

Latino
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allele count: 2017
allele frequency: 1.74239806496199e-1
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African
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allele count: 3961
allele frequency: 3.806457812800307e-1
allele num: 10406
num of homozygotes: 737

European (Finnish)
type: Population
allele count: 1706
allele frequency: 2.579377078923495e-1
allele num: 6614
num of homozygotes: 215

Other
type: Population
allele count: 198
allele frequency: 2.180616740088106e-1
allele num: 908
num of homozygotes: 15

European (Non-Finnish)
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allele count: 10995
allele frequency: 1.647585938202416e-1
allele num: 66734
num of homozygotes: 953

East Asian
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allele count: 1909
allele frequency: 2.20846830171217e-1
allele num: 8644
num of homozygotes: 220

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

DP
type: SiteQuality
SIO_000300: 5.076136e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
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allele count: 9
allele frequency: 8.648856428983279e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

MQRankSum
type: SiteQuality
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.97e1

DP
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FS
type: SiteQuality
SIO_000300: 1.092e0

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
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FS
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SIO_000300: 7.95e-1

MQ
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SIO_000300: 5.899e1

BaseQRankSum
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ClippingRankSum
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SIO_000300: -6.879999999999999e-1

QD
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SIO_000300: 1.212e1

MQRankSum
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SIO_000300: 4.62e-1

VQSLOD
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SIO_000300: 1.8e-1

ReadPosRankSum
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SIO_000300: 1.03e0

InbreedingCoeff
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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BaseQRankSum
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SIO_000300: -1.433e0

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.387e1

FS
type: SiteQuality
SIO_000300: 4.048e0

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

DP
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SIO_000300: 3.288876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

Latino
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allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.246e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

FS
type: SiteQuality
SIO_000300: 1.126e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.62e-1

DP
type: SiteQuality
SIO_000300: 3.289008e6

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495459585818323e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 1.149e0

QD
type: SiteQuality
SIO_000300: 1.051e1

BaseQRankSum
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SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.288526e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele num: 10406
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Latino
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QD
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.991727610598249e-5
allele num: 66728
num of homozygotes: 0

Other
type: Population
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East Asian
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Latino
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European (Finnish)
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allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

South Asian
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQRankSum
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MQ
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FS
type: SiteQuality
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
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Other
type: Population
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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SIO_000300: 8.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.046e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.531e1

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.376e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.802e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 3.28638e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.229e0

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.35e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.343e0

MQ
type: SiteQuality
SIO_000300: 5.874e1

FS
type: SiteQuality
SIO_000300: 1.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e0

VQSLOD
type: SiteQuality
SIO_000300: -2.191e0

DP
type: SiteQuality
SIO_000300: 3.286329e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.095e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.285e0

FS
type: SiteQuality
SIO_000300: 2.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.399e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 3.28336e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.189e0

QD
type: SiteQuality
SIO_000300: 1.573e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 3.282503e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

DP
type: SiteQuality
SIO_000300: 3.279331e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.439e1

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.379e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.13e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.493e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.482e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

DP
type: SiteQuality
SIO_000300: 3.275301e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99868058054456e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.724e1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.993e0

MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 3.92e0

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
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European (Finnish)
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East Asian
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European (Non-Finnish)
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QD
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DP
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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FS
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DP
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MQ
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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South Asian
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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Latino
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African
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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MQRankSum
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FS
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DP
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Finnish)
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MQ
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DP
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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VQSLOD
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MQRankSum
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DP
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European (Finnish)
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QD
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VQSLOD
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African
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QD
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VQSLOD
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.44e0

MQ
type: SiteQuality
SIO_000300: 5.288e1

VQSLOD
type: SiteQuality
SIO_000300: -6.647e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.743e0

FS
type: SiteQuality
SIO_000300: 2.001e0

QD
type: SiteQuality
SIO_000300: 1.247e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.236e0

DP
type: SiteQuality
SIO_000300: 5.439074e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 51554
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.54e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 7.727e0

DP
type: SiteQuality
SIO_000300: 5.439199e6

VQSLOD
type: SiteQuality
SIO_000300: -1.521e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.317e0

MQ
type: SiteQuality
SIO_000300: 5.491e1

GenotypeQuality
all individuals: 768
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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GenotypeQuality
all individuals: 1530
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variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.022e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.64e0

DP
type: SiteQuality
SIO_000300: 5.439409e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.595e1

QD
type: SiteQuality
SIO_000300: 1.411e1

MQRankSum
type: SiteQuality
SIO_000300: 3.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2692
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1532
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variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.444e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

MQ
type: SiteQuality
SIO_000300: 4.803e1

QD
type: SiteQuality
SIO_000300: 1.403e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.363e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

VQSLOD
type: SiteQuality
SIO_000300: -1.71e0

DP
type: SiteQuality
SIO_000300: 5.439017e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51555
bin: 9.75e1
variant carriers: 529

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2688
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 1531
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.804920238324044e-4
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 537
allele frequency: 6.205223018257453e-2
allele num: 8654
num of homozygotes: 25

South Asian
type: Population
allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

DP
type: SiteQuality
SIO_000300: 5.47795e6

QD
type: SiteQuality
SIO_000300: 1.275e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.69e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.785e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51903
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variant carriers: 33443

GenotypeQuality
all individuals: 1212
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GenotypeQuality
all individuals: 1137
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 6655
allele frequency: 6.395348837209303e-1
allele num: 10406
num of homozygotes: 2132

South Asian
type: Population
allele count: 8900
allele frequency: 5.390019379844961e-1
allele num: 16512
num of homozygotes: 2464

European (Finnish)
type: Population
allele count: 2316
allele frequency: 3.502722323049002e-1
allele num: 6612
num of homozygotes: 407

Latino
type: Population
allele count: 2905
allele frequency: 2.509936063590807e-1
allele num: 11574
num of homozygotes: 370

Other
type: Population
allele count: 300
allele frequency: 3.303964757709251e-1
allele num: 908
num of homozygotes: 49

East Asian
type: Population
allele count: 2427
allele frequency: 2.809027777777778e-1
allele num: 8640
num of homozygotes: 324

European (Non-Finnish)
type: Population
allele count: 18228
allele frequency: 2.73160497527349e-1
allele num: 66730
num of homozygotes: 2528

QD
type: SiteQuality
SIO_000300: 1.674e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.401e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.213e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 7.348258e6

GenotypeQuality
all individuals: 2679
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2418
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3139
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
all individuals: 39673
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variant carriers: 12

GenotypeQuality
all individuals: 1
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.661821705426356e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.287434e6

FS
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-1

MQ
type: SiteQuality
SIO_000300: 5.43e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.403e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

VQSLOD
type: SiteQuality
SIO_000300: -8.666e-1

GenotypeQuality
all individuals: 2642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2418
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3139
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GenotypeQuality
all individuals: 1295
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 39668
bin: 9.75e1
variant carriers: 165

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 158
allele frequency: 1.825745320083199e-2
allele num: 8654
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993766482857828e-5
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

DP
type: SiteQuality
SIO_000300: 3.29425e6

QD
type: SiteQuality
SIO_000300: 1.379e1

GenotypeQuality
all individuals: 2684
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2656
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 7315
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GenotypeQuality
all individuals: 39594
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GenotypeQuality
all individuals: 3149
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GenotypeQuality
all individuals: 1573
bin: 8.75e1
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
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FS
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11578
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

MQ
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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MQRankSum
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DP
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990919171636647e-5
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.825e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

DP
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MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 131
allele frequency: 1.962958523135939e-3
allele num: 66736
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.843936190659235e-4
allele num: 10406
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South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
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European (Finnish)
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allele count: 73
allele frequency: 1.103719383126701e-2
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
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Other
type: Population
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allele frequency: 2.202643171806168e-3
allele num: 908
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.827e1

MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66730
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East Asian
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South Asian
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
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Latino
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Other
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allele num: 908
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FS
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
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Latino
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European (Non-Finnish)
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allele num: 66730
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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South Asian
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
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allele num: 8654
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South Asian
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Other
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African
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allele count: 4
allele frequency: 3.843936190659235e-4
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Latino
type: Population
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.649274319299508e-4
allele num: 66696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.574e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.015e0

MQ
type: SiteQuality
SIO_000300: 5.823e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e0

DP
type: SiteQuality
SIO_000300: 3.244518e6

QD
type: SiteQuality
SIO_000300: 1.46e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-1

FS
type: SiteQuality
SIO_000300: 5.1576e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.653e0

GenotypeQuality
all individuals: 2435
bin: 7.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1069
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 2694
bin: 6.75e1
variant carriers: 16

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 23

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 20

GenotypeQuality
all individuals: 7305
bin: 6.25e1
variant carriers: 21

GenotypeQuality
all individuals: 3162
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2681
bin: 8.25e1
variant carriers: 30

GenotypeQuality
all individuals: 1595
bin: 8.75e1
variant carriers: 26

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 228
allele frequency: 3.680981595092025e-2
allele num: 6194
num of homozygotes: 0

East Asian
type: Population
allele count: 30
allele frequency: 3.491620111731843e-3
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 147
allele frequency: 1.476200040168709e-2
allele num: 9958
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 2.144469525959368e-2
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.64987843001042e-3
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424830261881668e-4
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 648
allele frequency: 9.937430990062569e-3
allele num: 65208
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.288423e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.335e0

MQ
type: SiteQuality
SIO_000300: 5.822e1

FS
type: SiteQuality
SIO_000300: 1.5849e2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.088e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.05e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.262e2

QD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.47e-2

GenotypeQuality
all individuals: 2735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38998
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.774e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.362e0

FS
type: SiteQuality
SIO_000300: 2.624e0

VQSLOD
type: SiteQuality
SIO_000300: -1.284e0

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 3.133365e6

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7316
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501530520376928e-5
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 2.271e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 3.130942e6

QD
type: SiteQuality
SIO_000300: 1.349e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 7267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38996
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.801260882617833e-4
allele num: 66620
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

DP
type: SiteQuality
SIO_000300: 3.128979e6

QD
type: SiteQuality
SIO_000300: 1.451e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.724e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3229
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

FS
type: SiteQuality
SIO_000300: 6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 3.125594e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.098e0

MQ
type: SiteQuality
SIO_000300: 5.809e1

MQRankSum
type: SiteQuality
SIO_000300: -7.01e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.012e0

GenotypeQuality
all individuals: 1308
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0