20-62075968-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62075968
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62075968
    reference: chr 20
allele count: 1
allele frequency: 9.558401835213153e-5
allele num: 10462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+44C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22882
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

20-62075980-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62075980
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62075980
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 11292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+32G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+32G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26378
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

20-62075981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62075981
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62075981
    reference: chr 20
allele count: 1
allele frequency: 8.343066911396629e-5
allele num: 11986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+31C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27381
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24856
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

20-62075987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62075987
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62075987
    reference: chr 20
allele count: 1
allele frequency: 7.351860020585208e-5
allele num: 13602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+25G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

20-62076000-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076000
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076000
    reference: chr 20
allele count: 1
allele frequency: 5.714938850154303e-5
allele num: 17498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+12C>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35090
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14914
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

20-62076002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076002
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076002
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 18150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+10G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35185
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

20-62076003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076003
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076003
    reference: chr 20
allele count: 1
allele frequency: 5.350454788657036e-5
allele num: 18690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+9C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

20-62076009-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076009
    reference: chr 20
allele count: 2
allele frequency: 9.516558812333461e-5
allele num: 21016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.865+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.690+3G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
hgvs: c.690+3G>A
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-62076045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076045
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076045
    reference: chr 20
allele count: 1
allele frequency: 3.350083752093803e-5
allele num: 29850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.657G>A
  hgvsp: ENST00000370224.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.657G>A
  hgvsp: ENST00000344462.4:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.657G>A
  hgvsp: ENST00000357249.2:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.657G>A
  hgvsp: ENST00000359125.2:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.657G>A
  hgvsp: ENST00000354587.3:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.657G>A
  hgvsp: ENST00000344425.5:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.657G>A
  hgvsp: ENST00000360480.3:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.657G>A
  hgvsp: ENST00000359689.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.832G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys219Lys
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

20-62076060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076060
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076060
    reference: chr 20
allele count: 1
allele frequency: 1.855769587647998e-5
allele num: 53886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.642G>A
  hgvsp: ENST00000344425.5:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.642G>A
  hgvsp: ENST00000357249.2:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.642G>A
  hgvsp: ENST00000344462.4:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.642G>A
  hgvsp: ENST00000360480.3:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.642G>A
  hgvsp: ENST00000359125.2:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.642G>A
  hgvsp: ENST00000354587.3:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.642G>A
  hgvsp: ENST00000359689.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.642G>A
  hgvsp: ENST00000370224.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.817G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8500
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg214Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

20-62076075-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076075
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076075
    reference: chr 20
allele count: 4
allele frequency: 6.107616197398156e-5
allele num: 65492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.627C>A
  hgvsp: ENST00000370224.1:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.627C>A
  hgvsp: ENST00000344462.4:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.627C>A
  hgvsp: ENST00000359689.1:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.627C>A
  hgvsp: ENST00000360480.3:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.627C>A
  hgvsp: ENST00000354587.3:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.627C>A
  hgvsp: ENST00000359125.2:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.627C>A
  hgvsp: ENST00000344425.5:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.802C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.627C>A
  hgvsp: ENST00000357249.2:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13496
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile209Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

20-62076114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076114
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076114
    reference: chr 20
allele count: 2
allele frequency: 2.45398773006135e-5
allele num: 81500
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.588G>A
  hgvsp: ENST00000359125.2:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.588G>A
  hgvsp: ENST00000370224.1:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.588G>A
  hgvsp: ENST00000344462.4:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.588G>A
  hgvsp: ENST00000357249.2:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.588G>A
  hgvsp: ENST00000359689.1:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.588G>A
  hgvsp: ENST00000360480.3:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.763G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.588G>A
  hgvsp: ENST00000354587.3:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.588G>A
  hgvsp: ENST00000344425.5:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22019
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala196Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

20-62076120-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076120
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076120
    reference: chr 20
allele count: 1
allele frequency: 1.178300419474949e-5
allele num: 84868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.757A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.582A>G
  hgvsp: ENST00000359125.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.582A>G
  hgvsp: ENST00000354587.3:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.582A>G
  hgvsp: ENST00000360480.3:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.582A>G
  hgvsp: ENST00000359689.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.582A>G
  hgvsp: ENST00000344462.4:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.582A>G
  hgvsp: ENST00000344425.5:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.582A>G
  hgvsp: ENST00000357249.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.582A>G
  hgvsp: ENST00000370224.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18717
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr194Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

20-62076131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076131
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076131
    reference: chr 20
allele count: 1
allele frequency: 1.144243311897842e-5
allele num: 87394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.571G>A
  hgvsp: ENSP00000345523.5:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.571G>A
  hgvsp: ENSP00000349789.2:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.571G>A
  hgvsp: ENSP00000353668.3:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.571G>A
  hgvsp: ENSP00000352718.1:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.571G>A
  hgvsp: ENSP00000339611.4:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.571G>A
  hgvsp: ENSP00000359244.1:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.746G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.571G>A
  hgvsp: ENSP00000352035.2:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.571G>A
  hgvsp: ENSP00000346601.3:p.Val191Ile
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val191Ile
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

20-62076132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076132
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076132
    reference: chr 20
allele count: 47
allele frequency: 5.368728867769351e-4
allele num: 87544
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.570C>T
  hgvsp: ENST00000354587.3:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.570C>T
  hgvsp: ENST00000357249.2:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.570C>T
  hgvsp: ENST00000344462.4:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.570C>T
  hgvsp: ENST00000360480.3:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.570C>T
  hgvsp: ENST00000359689.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.745C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.570C>T
  hgvsp: ENST00000344425.5:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.570C>T
  hgvsp: ENST00000359125.2:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.570C>T
  hgvsp: ENST00000370224.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5893
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25859
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn190Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

20-62076147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076147
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076147
    reference: chr 20
allele count: 1
allele frequency: 1.122057404456812e-5
allele num: 89122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.555C>T
  hgvsp: ENST00000344425.5:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.555C>T
  hgvsp: ENST00000357249.2:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.555C>T
  hgvsp: ENST00000354587.3:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.555C>T
  hgvsp: ENST00000359689.1:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.555C>T
  hgvsp: ENST00000370224.1:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.555C>T
  hgvsp: ENST00000344462.4:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.730C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.555C>T
  hgvsp: ENST00000360480.3:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.555C>T
  hgvsp: ENST00000359125.2:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala185Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

20-62076147-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076147
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076147
    reference: chr 20
allele count: 1
allele frequency: 1.122057404456812e-5
allele num: 89122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.555C>G
  hgvsp: ENST00000360480.3:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.555C>G
  hgvsp: ENST00000354587.3:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.555C>G
  hgvsp: ENST00000344425.5:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.555C>G
  hgvsp: ENST00000359689.1:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.730C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.555C>G
  hgvsp: ENST00000370224.1:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.555C>G
  hgvsp: ENST00000359125.2:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.555C>G
  hgvsp: ENST00000344462.4:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.555C>G
  hgvsp: ENST00000357249.2:c.555C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9176
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala185Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

20-62076150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076150
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076150
    reference: chr 20
allele count: 1
allele frequency: 1.118243016572361e-5
allele num: 89426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.552C>T
  hgvsp: ENST00000344425.5:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.552C>T
  hgvsp: ENST00000360480.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.552C>T
  hgvsp: ENST00000359689.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.552C>T
  hgvsp: ENST00000354587.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.552C>T
  hgvsp: ENST00000359125.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.552C>T
  hgvsp: ENST00000344462.4:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.727C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.552C>T
  hgvsp: ENST00000357249.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.552C>T
  hgvsp: ENST00000370224.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala184Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

20-62076164-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076164
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076164
    reference: chr 20
allele count: 2
allele frequency: 2.247494044140783e-5
allele num: 88988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.538A>G
  hgvsp: ENSP00000339611.4:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.538A>G
  hgvsp: ENSP00000346601.3:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.538A>G
  hgvsp: ENSP00000353668.3:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.538A>G
  hgvsp: ENSP00000359244.1:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.713A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.538A>G
  hgvsp: ENSP00000352718.1:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.538A>G
  hgvsp: ENSP00000345523.5:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.538A>G
  hgvsp: ENSP00000349789.2:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.538A>G
  hgvsp: ENSP00000352035.2:p.Ile180Val
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile180Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

20-62076165-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076165
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076165
    reference: chr 20
allele count: 4
allele frequency: 4.495089115141708e-5
allele num: 88986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.537C>T
  hgvsp: ENST00000359689.1:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.537C>T
  hgvsp: ENST00000357249.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.537C>T
  hgvsp: ENST00000354587.3:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.537C>T
  hgvsp: ENST00000344462.4:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.537C>T
  hgvsp: ENST00000370224.1:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.537C>T
  hgvsp: ENST00000344425.5:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.537C>T
  hgvsp: ENST00000360480.3:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.537C>T
  hgvsp: ENST00000359125.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.712C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26201
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17642
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser179Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

20-62076168-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076168
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076168
    reference: chr 20
allele count: 1
allele frequency: 1.12989243424026e-5
allele num: 88504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.534C>T
  hgvsp: ENST00000359689.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.534C>T
  hgvsp: ENST00000344425.5:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.534C>T
  hgvsp: ENST00000357249.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.534C>T
  hgvsp: ENST00000344462.4:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.534C>T
  hgvsp: ENST00000370224.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.534C>T
  hgvsp: ENST00000359125.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.534C>T
  hgvsp: ENST00000360480.3:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.534C>T
  hgvsp: ENST00000354587.3:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.709C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala178Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

20-62076173-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076173
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076173
    reference: chr 20
allele count: 1
allele frequency: 1.145291705797467e-5
allele num: 87314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.529A>G
  hgvsp: ENSP00000339611.4:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.529A>G
  hgvsp: ENSP00000345523.5:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.529A>G
  hgvsp: ENSP00000352718.1:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.529A>G
  hgvsp: ENSP00000359244.1:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.529A>G
  hgvsp: ENSP00000353668.3:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.529A>G
  hgvsp: ENSP00000352035.2:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.704A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.529A>G
  hgvsp: ENSP00000349789.2:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.529A>G
  hgvsp: ENSP00000346601.3:p.Ile177Val
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile177Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

20-62076196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076196
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076196
    reference: chr 20
allele count: 15
allele frequency: 1.865764465893826e-4
allele num: 80396
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-9G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13952
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15815
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

20-62076198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076198
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076198
    reference: chr 20
allele count: 1
allele frequency: 1.25093820365274e-5
allele num: 79940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-11C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

20-62076200-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076200
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076200
    reference: chr 20
allele count: 2
allele frequency: 2.539037704709915e-5
allele num: 78770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-13G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24994
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-62076201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076201
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076201
    reference: chr 20
allele count: 12
allele frequency: 1.538935056940597e-4
allele num: 77976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-14C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16256
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP

20-62076202-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076202
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076202
    reference: chr 20
allele count: 1
allele frequency: 1.280180249379112e-5
allele num: 78114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-15A>G
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16247
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4844
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

20-62076209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076209
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076209
    reference: chr 20
allele count: 2
allele frequency: 2.654914246269845e-5
allele num: 75332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-22C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17913
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25921
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-62076216-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076216
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076216
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 71184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-29A>G
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16362
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

20-62076220-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076220
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076221
    reference: chr 20
allele count: 28
allele frequency: 4.05338892266713e-4
allele num: 69078
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-34_515-33insA
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-34_690-33insA
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18977
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16803
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

20-62076224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076224
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076224
    reference: chr 20
allele count: 2
allele frequency: 3.126954346466542e-5
allele num: 63960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-37G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-37G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17499
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9736
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

20-62076225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076225
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076225
    reference: chr 20
allele count: 254
allele frequency: 4.051295138445834e-3
allele num: 62696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-38C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 1.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17352
  bin: 1.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 18473
  bin: 7.5e0
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 6.75e1
  variant carriers: 14
num of homozygotes: 3
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

20-62076225-GCTCCCCGCACCCCCTTGGAGAAAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076225
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076201
    reference: chr 20
allele count: 1
allele frequency: 1.594998086002297e-5
allele num: 62696
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: GCTCCCCGCACCCCCTTGGAGAAAA
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

20-62076231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076231
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076231
    reference: chr 20
allele count: 1
allele frequency: 1.70712554201236e-5
allele num: 58578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-44G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10277
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4825
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

20-62076232-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076232
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076232
    reference: chr 20
allele count: 2
allele frequency: 3.580251333643622e-5
allele num: 55862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-45C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9320
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21078
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5214
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

20-62076233-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076233
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076233
    reference: chr 20
allele count: 1
allele frequency: 1.761183515322297e-5
allele num: 56780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-46G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7604
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5182
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/20-62076234-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076234
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076233
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 55144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-48delG
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9400
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21583
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9918
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: AC
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-62076235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076235
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076235
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 55540
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-48G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21600
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6824
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5316
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/20-62076237-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076237
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076237
    reference: chr 20
allele count: 1
allele frequency: 1.827351801768876e-5
allele num: 54724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.690-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.515-50G>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7474
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5582
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

20-62076547-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076547
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076547
    reference: chr 20
allele count: 1
allele frequency: 8.320298199487469e-6
allele num: 120188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+44A>C
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

20-62076555-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076555
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076553
    reference: chr 20
allele count: 1
allele frequency: 8.316146630297385e-6
allele num: 120248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+34_689+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+34_514+35delAG
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7848
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17570
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CCT
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

20-62076558-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076558
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076558
    reference: chr 20
allele count: 2
allele frequency: 1.66333998669328e-5
allele num: 120240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+33C>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+33C>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3836
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

20-62076570-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076570
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076570
    reference: chr 20
allele count: 4
allele frequency: 3.324633874694549e-5
allele num: 120314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+21T>C
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7900
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

20-62076572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076572
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076572
    reference: chr 20
allele count: 4
allele frequency: 3.324247058041354e-5
allele num: 120328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+19G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/20-62076580-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076580
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076580
    reference: chr 20
allele count: 1
allele frequency: 8.307165761185599e-6
allele num: 120378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+11G>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

20-62076582-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076582
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076582
    reference: chr 20
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.689+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.514+9T>C
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

20-62076605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076605
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076605
    reference: chr 20
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.500C>T
  hgvsp: ENSP00000359244.1:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.500C>T
  hgvsp: ENSP00000339611.4:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.675C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.500C>T
  hgvsp: ENSP00000345523.5:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.500C>T
  hgvsp: ENSP00000352718.1:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.500C>T
  hgvsp: ENSP00000352035.2:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.500C>T
  hgvsp: ENSP00000353668.3:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.500C>T
  hgvsp: ENSP00000349789.2:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.500C>T
  hgvsp: ENSP00000346601.3:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro167Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

20-62076611-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076611
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076611
    reference: chr 20
allele count: 3
allele frequency: 2.490701381509033e-5
allele num: 120448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.494G>A
  hgvsp: ENSP00000353668.3:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.669G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.494G>A
  hgvsp: ENSP00000352035.2:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.494G>A
  hgvsp: ENSP00000352718.1:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.494G>A
  hgvsp: ENSP00000339611.4:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.494G>A
  hgvsp: ENSP00000359244.1:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.494G>A
  hgvsp: ENSP00000346601.3:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.494G>A
  hgvsp: ENSP00000349789.2:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.494G>A
  hgvsp: ENSP00000345523.5:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg165Gln
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

20-62076612-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076612
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076612
    reference: chr 20
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.493C>T
  hgvsp: ENSP00000353668.3:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.493C>T
  hgvsp: ENSP00000339611.4:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.493C>T
  hgvsp: ENSP00000352035.2:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.668C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.493C>T
  hgvsp: ENSP00000345523.5:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.493C>T
  hgvsp: ENSP00000349789.2:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.493C>T
  hgvsp: ENSP00000346601.3:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.493C>T
  hgvsp: ENSP00000352718.1:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.493C>T
  hgvsp: ENSP00000359244.1:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg165Trp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

20-62076620-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076620
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076620
    reference: chr 20
allele count: 1
allele frequency: 8.302062232258493e-6
allele num: 120452
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.485A>G
  hgvsp: ENSP00000339611.4:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.485A>G
  hgvsp: ENSP00000359244.1:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.485A>G
  hgvsp: ENSP00000346601.3:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.485A>G
  hgvsp: ENSP00000352035.2:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.485A>G
  hgvsp: ENSP00000353668.3:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.485A>G
  hgvsp: ENSP00000345523.5:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.660A>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.485A>G
  hgvsp: ENSP00000352718.1:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.485A>G
  hgvsp: ENSP00000349789.2:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys162Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/20-62076628-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076628
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076628
    reference: chr 20
allele count: 5
allele frequency: 4.150893272232185e-5
allele num: 120456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.477G>T
  hgvsp: ENST00000344462.4:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.477G>T
  hgvsp: ENST00000359125.2:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.477G>T
  hgvsp: ENST00000354587.3:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.477G>T
  hgvsp: ENST00000357249.2:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.477G>T
  hgvsp: ENST00000360480.3:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.477G>T
  hgvsp: ENST00000359689.1:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.477G>T
  hgvsp: ENST00000370224.1:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.652G>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.477G>T
  hgvsp: ENST00000344425.5:c.477G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17390
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly159Gly
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

20-62076641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076641
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076641
    reference: chr 20
allele count: 1
allele frequency: 8.299581701082266e-6
allele num: 120488
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.464G>A
  hgvsp: ENSP00000352035.2:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.464G>A
  hgvsp: ENSP00000359244.1:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.464G>A
  hgvsp: ENSP00000339611.4:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.464G>A
  hgvsp: ENSP00000346601.3:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.464G>A
  hgvsp: ENSP00000353668.3:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.464G>A
  hgvsp: ENSP00000349789.2:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.464G>A
  hgvsp: ENSP00000345523.5:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.639G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.464G>A
  hgvsp: ENSP00000352718.1:p.Arg155His
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg155His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

20-62076655-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076655
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076655
    reference: chr 20
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.450C>T
  hgvsp: ENST00000359125.2:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.450C>T
  hgvsp: ENST00000344425.5:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.450C>T
  hgvsp: ENST00000344462.4:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.450C>T
  hgvsp: ENST00000354587.3:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.450C>T
  hgvsp: ENST00000359689.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.450C>T
  hgvsp: ENST00000370224.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.450C>T
  hgvsp: ENST00000360480.3:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.450C>T
  hgvsp: ENST00000357249.2:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.625C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys150Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-62076656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076656
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076656
    reference: chr 20
allele count: 1
allele frequency: 8.303027283747654e-6
allele num: 120438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.624G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.449G>A
  hgvsp: ENSP00000346601.3:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.449G>A
  hgvsp: ENSP00000352718.1:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.449G>A
  hgvsp: ENSP00000339611.4:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.449G>A
  hgvsp: ENSP00000353668.3:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.449G>A
  hgvsp: ENSP00000352035.2:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.449G>A
  hgvsp: ENSP00000349789.2:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.449G>A
  hgvsp: ENSP00000359244.1:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.449G>A
  hgvsp: ENSP00000345523.5:p.Cys150Tyr
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4550
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys150Tyr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

20-62076658-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076658
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076658
    reference: chr 20
allele count: 5
allele frequency: 4.151375765928829e-5
allele num: 120442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.447C>G
  hgvsp: ENST00000344462.4:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.447C>G
  hgvsp: ENST00000359689.1:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.447C>G
  hgvsp: ENST00000354587.3:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.447C>G
  hgvsp: ENST00000359125.2:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.447C>G
  hgvsp: ENST00000370224.1:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.447C>G
  hgvsp: ENST00000360480.3:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.622C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.447C>G
  hgvsp: ENST00000344425.5:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.447C>G
  hgvsp: ENST00000357249.2:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4551
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly149Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

20-62076664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076664
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076664
    reference: chr 20
allele count: 15
allele frequency: 1.245371369742457e-4
allele num: 120446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.441C>T
  hgvsp: ENST00000359689.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.441C>T
  hgvsp: ENST00000357249.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.441C>T
  hgvsp: ENST00000360480.3:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.441C>T
  hgvsp: ENST00000344425.5:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.441C>T
  hgvsp: ENST00000370224.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.441C>T
  hgvsp: ENST00000354587.3:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.616C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.441C>T
  hgvsp: ENST00000359125.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.441C>T
  hgvsp: ENST00000344462.4:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala147Ala
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

20-62076678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076678
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076678
    reference: chr 20
allele count: 1
allele frequency: 8.30137304710199e-6
allele num: 120462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.427G>A
  hgvsp: ENSP00000346601.3:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.602G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.427G>A
  hgvsp: ENSP00000352035.2:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.427G>A
  hgvsp: ENSP00000345523.5:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.427G>A
  hgvsp: ENSP00000339611.4:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.427G>A
  hgvsp: ENSP00000359244.1:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.427G>A
  hgvsp: ENSP00000349789.2:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.427G>A
  hgvsp: ENSP00000352718.1:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.427G>A
  hgvsp: ENSP00000353668.3:p.Val143Met
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17848
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val143Met
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP

20-62076679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076679
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076679
    reference: chr 20
allele count: 18
allele frequency: 1.494271957496264e-4
allele num: 120460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.426C>T
  hgvsp: ENST00000354587.3:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.426C>T
  hgvsp: ENST00000360480.3:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.426C>T
  hgvsp: ENST00000344462.4:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.426C>T
  hgvsp: ENST00000357249.2:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.601C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.426C>T
  hgvsp: ENST00000359689.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.426C>T
  hgvsp: ENST00000359125.2:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.426C>T
  hgvsp: ENST00000370224.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.426C>T
  hgvsp: ENST00000344425.5:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe142Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

20-62076682-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076682
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076682
    reference: chr 20
allele count: 1
allele frequency: 8.301786544464368e-6
allele num: 120456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.423C>T
  hgvsp: ENST00000344462.4:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.423C>T
  hgvsp: ENST00000357249.2:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.423C>T
  hgvsp: ENST00000359689.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.423C>T
  hgvsp: ENST00000360480.3:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.423C>T
  hgvsp: ENST00000354587.3:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.423C>T
  hgvsp: ENST00000370224.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.423C>T
  hgvsp: ENST00000344425.5:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.423C>T
  hgvsp: ENST00000359125.2:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.598C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr141Tyr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

20-62076688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076688
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076688
    reference: chr 20
allele count: 2
allele frequency: 1.660495159656609e-5
allele num: 120446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.417G>A
  hgvsp: ENST00000359689.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.417G>A
  hgvsp: ENST00000359125.2:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.417G>A
  hgvsp: ENST00000357249.2:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.417G>A
  hgvsp: ENST00000354587.3:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.417G>A
  hgvsp: ENST00000344425.5:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.417G>A
  hgvsp: ENST00000360480.3:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.417G>A
  hgvsp: ENST00000344462.4:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.417G>A
  hgvsp: ENST00000370224.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.592G>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17845
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val139Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-62076690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076690
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076690
    reference: chr 20
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.415G>A
  hgvsp: ENSP00000346601.3:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.415G>A
  hgvsp: ENSP00000352718.1:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.415G>A
  hgvsp: ENSP00000345523.5:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.415G>A
  hgvsp: ENSP00000359244.1:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.590G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.415G>A
  hgvsp: ENSP00000339611.4:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.415G>A
  hgvsp: ENSP00000353668.3:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.415G>A
  hgvsp: ENSP00000352035.2:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.415G>A
  hgvsp: ENSP00000349789.2:p.Val139Met
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val139Met
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

20-62076691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076691
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076691
    reference: chr 20
allele count: 1
allele frequency: 8.303027283747654e-6
allele num: 120438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.414C>T
  hgvsp: ENST00000360480.3:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.414C>T
  hgvsp: ENST00000370224.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.414C>T
  hgvsp: ENST00000354587.3:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.414C>T
  hgvsp: ENST00000344462.4:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.414C>T
  hgvsp: ENST00000344425.5:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.414C>T
  hgvsp: ENST00000359689.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.589C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.414C>T
  hgvsp: ENST00000357249.2:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.414C>T
  hgvsp: ENST00000359125.2:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly138Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-62076694-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076694
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076694
    reference: chr 20
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.411T>C
  hgvsp: ENST00000344425.5:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.411T>C
  hgvsp: ENST00000359689.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.411T>C
  hgvsp: ENST00000344462.4:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.411T>C
  hgvsp: ENST00000357249.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.411T>C
  hgvsp: ENST00000359125.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.411T>C
  hgvsp: ENST00000354587.3:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.411T>C
  hgvsp: ENST00000360480.3:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.586T>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.411T>C
  hgvsp: ENST00000370224.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe137Phe
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-62076702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076702
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076702
    reference: chr 20
allele count: 2
allele frequency: 1.661295145695584e-5
allele num: 120388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.578G>A
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.403G>A
  hgvsp: ENSP00000345523.5:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.403G>A
  hgvsp: ENSP00000346601.3:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.403G>A
  hgvsp: ENSP00000352718.1:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.403G>A
  hgvsp: ENSP00000359244.1:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.403G>A
  hgvsp: ENSP00000349789.2:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.403G>A
  hgvsp: ENSP00000339611.4:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.403G>A
  hgvsp: ENSP00000353668.3:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.403G>A
  hgvsp: ENSP00000352035.2:p.Val135Met
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val135Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

20-62076703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076703
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076703
    reference: chr 20
allele count: 4
allele frequency: 3.322755893738266e-5
allele num: 120382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.402C>T
  hgvsp: ENST00000354587.3:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.402C>T
  hgvsp: ENST00000359689.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.402C>T
  hgvsp: ENST00000344462.4:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.402C>T
  hgvsp: ENST00000359125.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.402C>T
  hgvsp: ENST00000357249.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.402C>T
  hgvsp: ENST00000360480.3:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.577C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.402C>T
  hgvsp: ENST00000370224.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.402C>T
  hgvsp: ENST00000344425.5:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3812
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile134Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/20-62076706-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076706
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076706
    reference: chr 20
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.399T>G
  hgvsp: ENST00000344462.4:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.399T>G
  hgvsp: ENST00000359689.1:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.399T>G
  hgvsp: ENST00000357249.2:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.399T>G
  hgvsp: ENST00000370224.1:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.399T>G
  hgvsp: ENST00000360480.3:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.574T>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.399T>G
  hgvsp: ENST00000354587.3:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.399T>G
  hgvsp: ENST00000359125.2:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.399T>G
  hgvsp: ENST00000344425.5:c.399T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13163
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr133Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

20-62076712-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076712
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076712
    reference: chr 20
allele count: 1
allele frequency: 8.310341388824253e-6
allele num: 120332
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.393C>A
  hgvsp: ENST00000359125.2:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.393C>A
  hgvsp: ENST00000359689.1:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.393C>A
  hgvsp: ENST00000360480.3:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.393C>A
  hgvsp: ENST00000354587.3:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.393C>A
  hgvsp: ENST00000344462.4:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.393C>A
  hgvsp: ENST00000370224.1:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.393C>A
  hgvsp: ENST00000344425.5:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.393C>A
  hgvsp: ENST00000357249.2:c.393C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.568C>A
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile131Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

20-62076721-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076721
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076721
    reference: chr 20
allele count: 1
allele frequency: 8.315455104857889e-6
allele num: 120258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.563-4G>C
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.388-4G>C
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13273
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 7.25e1
  variant carriers: 0
hgvs: c.388-4G>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

20-62076726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076726
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076726
    reference: chr 20
allele count: 5
allele frequency: 4.162573469421735e-5
allele num: 120118
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.388-9C>T
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.563-9C>T
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

20-62076726-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62076726
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 62076726
    reference: chr 20
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000346601
  ensembl transcript: ENST00000354587
  gene symbol: KCNQ2
  hgvsc: ENST00000354587.3:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000353668
  ensembl transcript: ENST00000360480
  gene symbol: KCNQ2
  hgvsc: ENST00000360480.3:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl transcript: ENST00000370221
  gene symbol: KCNQ2
  hgvsc: ENST00000370221.1:n.563-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000345523
  ensembl transcript: ENST00000344425
  gene symbol: KCNQ2
  hgvsc: ENST00000344425.5:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352718
  ensembl transcript: ENST00000359689
  gene symbol: KCNQ2
  hgvsc: ENST00000359689.1:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000339611
  ensembl transcript: ENST00000344462
  gene symbol: KCNQ2
  hgvsc: ENST00000344462.4:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000349789
  ensembl transcript: ENST00000357249
  gene symbol: KCNQ2
  hgvsc: ENST00000357249.2:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000352035
  ensembl transcript: ENST00000359125
  gene symbol: KCNQ2
  hgvsc: ENST00000359125.2:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075043
  ensembl protein: ENSP00000359244
  ensembl transcript: ENST00000370224
  gene symbol: KCNQ2
  hgvsc: ENST00000370224.1:c.388-9C>G
  variant of: http://identifiers.org/hgnc/6296
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 583
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7320
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6401
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.747638326585695e-4
allele num: 1482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

DP
type: SiteQuality
SIO_000300: 3.21921e5

QD
type: SiteQuality
SIO_000300: 4.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.09e-2

MQ
type: SiteQuality
SIO_000300: 5.787e1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 3.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.776e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
all individuals: 85
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21924
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4708
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.53251e5

VQSLOD
type: SiteQuality
SIO_000300: -1.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.64e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 1794
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21638
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.082725060827251e-4
allele num: 1644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 3.64119e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.37e-2

QD
type: SiteQuality
SIO_000300: 8.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 2631
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19326
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28169
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.488095238095238e-4
allele num: 6720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.763e1

QD
type: SiteQuality
SIO_000300: 8.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.22e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 3.96868e5

VQSLOD
type: SiteQuality
SIO_000300: 5.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2027
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.291989664082687e-3
allele num: 774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.50914e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.448e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32875
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14575
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 659
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4156
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8884
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

DP
type: SiteQuality
SIO_000300: 4.58372e5

QD
type: SiteQuality
SIO_000300: 1.378e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2474
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1526
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.097213078779899e-4
allele num: 9114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.115e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

DP
type: SiteQuality
SIO_000300: 4.64138e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 2.398e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2720
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 4.019292604501608e-4
allele num: 4976
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.338e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.36e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.87193e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

FS
type: SiteQuality
SIO_000300: 4.15e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.485e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.047e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.341561577676415e-4
allele num: 7454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3428
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.844e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.36045e5

VQSLOD
type: SiteQuality
SIO_000300: -1.034e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

QD
type: SiteQuality
SIO_000300: 1.388e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.452561800856235e-5
allele num: 28964
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3972
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.263e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.777e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.03e1

VQSLOD
type: SiteQuality
SIO_000300: -2.447e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 4.043671653861706e-4
allele num: 4946
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 5.473154178753216e-5
allele num: 36542
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10734
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQ
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.179e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.117477660610681e-5
allele num: 47226
num of homozygotes: 0

Other
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East Asian
type: Population
allele count: 1
allele frequency: 1.727712508638562e-4
allele num: 5788
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
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MQRankSum
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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allele num: 6150
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South Asian
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele num: 50684
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 12196
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.436e0

VQSLOD
type: SiteQuality
SIO_000300: -8.601e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.118e1

DP
type: SiteQuality
SIO_000300: 1.069295e6

GenotypeQuality
all individuals: 30132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 364
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 165
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 1378
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 9.75e1
variant carriers: 46

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17016
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 6.066120715802245e-4
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 5.525571832433821e-3
allele num: 7782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
type: SiteQuality
SIO_000300: 1.071727e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeQuality
all individuals: 1751
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.932964781381683e-5
allele num: 51734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6952
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.089016e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.411e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

QD
type: SiteQuality
SIO_000300: 7.9e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 556
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.294625082946251e-5
allele num: 12056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.9e0

FS
type: SiteQuality
SIO_000300: 1.411e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 1.089016e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeQuality
all individuals: 420
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 346
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16551
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variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
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variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
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GenotypeQuality
all individuals: 2618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.256597134958532e-4
allele num: 7958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

QD
type: SiteQuality
SIO_000300: 1.037e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 7.224e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

DP
type: SiteQuality
SIO_000300: 1.088751e6

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
all individuals: 265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
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variant carriers: 0

GenotypeQuality
all individuals: 31476
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variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1315
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variant carriers: 0

GenotypeQuality
all individuals: 647
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variant carriers: 0

GenotypeQuality
all individuals: 509
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GenotypeQuality
all individuals: 163
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.855347366797748e-5
allele num: 51876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.441e0

DP
type: SiteQuality
SIO_000300: 1.076164e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51852
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.547987616099071e-4
allele num: 6460
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.411233418007338e-4
allele num: 7086
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.738828029907842e-4
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.852e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

QD
type: SiteQuality
SIO_000300: 1.124e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

DP
type: SiteQuality
SIO_000300: 1.077642e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

GenotypeQuality
all individuals: 31219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.75e1
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GenotypeQuality
all individuals: 64
bin: 8.75e1
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GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.935733643050716e-5
allele num: 51660
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.068088e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.184e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

QD
type: SiteQuality
SIO_000300: 5.22e0

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19235
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.565435190983093e-4
allele num: 6388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 2.835e0

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

DP
type: SiteQuality
SIO_000300: 1.046163e6

QD
type: SiteQuality
SIO_000300: 8.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.073e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
all individuals: 776
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095908786049631e-5
allele num: 47712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7432
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 2.34820530023482e-3
allele num: 5962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.81e0

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.09e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

FS
type: SiteQuality
SIO_000300: 1.667e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 9.17968e5

GenotypeQuality
all individuals: 158
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24835
bin: 2.25e1
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GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 7.5e0
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GenotypeQuality
all individuals: 642
bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 19507
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.109348633142086e-5
allele num: 47408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.941e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.01925e5

QD
type: SiteQuality
SIO_000300: 7.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 5.584e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 18317
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.134380602749082e-5
allele num: 46852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.293807641633729e-4
allele num: 3036
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.87325e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.396e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.007e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 6.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
all individuals: 407
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2899
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.351206434316354e-4
allele num: 2984
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.779661016949153e-4
allele num: 5900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.507905734350093e-4
allele num: 46422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.685e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 5.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 8.65678e5

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2894
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.151833362024445e-5
allele num: 46472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 6.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

QD
type: SiteQuality
SIO_000300: 1.144e1

DP
type: SiteQuality
SIO_000300: 8.64542e5

GenotypeQuality
all individuals: 6002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
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GenotypeQuality
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GenotypeQuality
all individuals: 160
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variant carriers: 2

GenotypeQuality
all individuals: 1304
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 14011
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.442667377493447e-5
allele num: 45018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2842
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.25e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

DP
type: SiteQuality
SIO_000300: 8.16001e5

FS
type: SiteQuality
SIO_000300: 2.7233e1

VQSLOD
type: SiteQuality
SIO_000300: -4.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.35e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 24045
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variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.171e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

DP
type: SiteQuality
SIO_000300: 7.41028e5

MQ
type: SiteQuality
SIO_000300: 5.572e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 466
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 1

GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 2497
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 188
bin: 9.75e1
variant carriers: 29

GenotypeQuality
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GenotypeQuality
all individuals: 184
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variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2470
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 4.199160167966407e-3
allele num: 6668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

FS
type: SiteQuality
SIO_000300: 1.843e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

MQ
type: SiteQuality
SIO_000300: 6.031e1

QD
type: SiteQuality
SIO_000300: 1.718e1

DP
type: SiteQuality
SIO_000300: 7.18701e5

GenotypeQuality
all individuals: 735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3611
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 970
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20359
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GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 5064
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GenotypeQuality
all individuals: 159
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GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 4436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 8.75e1
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GenotypeQuality
all individuals: 3155
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.217503217503217e-4
allele num: 6216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39288
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.579e1

DP
type: SiteQuality
SIO_000300: 6.7714e5

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 19841
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 241

GenotypeQuality
all individuals: 5510
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3795
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3137
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4365
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 9866
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 898
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 168
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 194
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 4743
bin: 6.25e1
variant carriers: 7

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

African
type: Population
allele count: 219
allele frequency: 3.564453125e-2
allele num: 6144
num of homozygotes: 3

South Asian
type: Population
allele count: 1
allele frequency: 1.400560224089636e-4
allele num: 7140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 9.182736455463728e-4
allele num: 2178
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 2.941176470588235e-3
allele num: 3400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 5.191299382235374e-4
allele num: 38526
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 5.714285714285714e-3
allele num: 350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.72529e5

FS
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.97e-2

QD
type: SiteQuality
SIO_000300: 1.338e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

GenotypeQuality
all individuals: 168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.595649691117687e-5
allele num: 38526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

DP
type: SiteQuality
SIO_000300: 6.72529e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.97e-2

QD
type: SiteQuality
SIO_000300: 1.338e1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
all individuals: 52
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 1

GenotypeQuality
all individuals: 3355
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1358
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.505117399157134e-4
allele num: 6644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2014
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 6.4527e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 2.709e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeQuality
all individuals: 1272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 15549
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 574
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variant carriers: 0

GenotypeQuality
all individuals: 5847
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variant carriers: 0

GenotypeQuality
all individuals: 170
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variant carriers: 3

GenotypeQuality
all individuals: 1589
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variant carriers: 0

GenotypeQuality
all individuals: 5431
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3452
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.757715338553662e-5
allele num: 34736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.37663e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.1633e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.63e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.404e0

QD
type: SiteQuality
SIO_000300: 9.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

GenotypeQuality
all individuals: 16032
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5568
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
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variant carriers: 0

GenotypeQuality
all individuals: 168
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1257
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.825018362619357e-5
allele num: 35398
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 4.96e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.39e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 6.35184e5

VQSLOD
type: SiteQuality
SIO_000300: -2.718e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

GenotypeQuality
all individuals: 885
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5544
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1305
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variant carriers: 0

GenotypeQuality
all individuals: 14035
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1736
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5402
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7337
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variant carriers: 0

GenotypeQuality
all individuals: 2189
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GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 52
bin: 8.75e1
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GenotypeQuality
all individuals: 90
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 3.332e0

QD
type: SiteQuality
SIO_000300: 1.278e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.3221e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 10059
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 6.32227e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.189e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

GenotypeQuality
all individuals: 545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1729
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9864
bin: 7.5e0
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GenotypeQuality
all individuals: 5333
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 1774
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1016
bin: 5.25e1
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GenotypeQuality
all individuals: 7840
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.927229084948188e-5
allele num: 34162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 2.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 6.31396e5

GenotypeQuality
all individuals: 355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 3276
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GenotypeQuality
all individuals: 1976
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variant carriers: 0

GenotypeQuality
all individuals: 417
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GenotypeQuality
all individuals: 327
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GenotypeQuality
all individuals: 7733
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GenotypeQuality
all individuals: 3836
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.177e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.034e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.347e1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 2.267691e6

GenotypeQuality
all individuals: 1980
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.389999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
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SIO_000300: 2.04e0

QD
type: SiteQuality
SIO_000300: 2.748e1

DP
type: SiteQuality
SIO_000300: 2.273414e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.039698461912578e-5
allele num: 65796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.809e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.274948e6

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.164e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.089e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037482534475427e-5
allele num: 65844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.031221582297666e-4
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.286e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 4.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.939e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

DP
type: SiteQuality
SIO_000300: 2.27896e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.074411541381929e-5
allele num: 65850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.279653e6

FS
type: SiteQuality
SIO_000300: 5.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 9.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517634917744187e-5
allele num: 65892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.467e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.768e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

DP
type: SiteQuality
SIO_000300: 2.281234e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51758885482745e-5
allele num: 65894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.686e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.281574e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516484183069971e-5
allele num: 65942
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.55000455000455e-5
allele num: 65934
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.364e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.407e1

VQSLOD
type: SiteQuality
SIO_000300: -5.131e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.283117e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3286
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17503
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.283103e6

QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65938
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

DP
type: SiteQuality
SIO_000300: 2.282882e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 1.687e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

QD
type: SiteQuality
SIO_000300: 1.144e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.72e-2

FS
type: SiteQuality
SIO_000300: 1.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.158e0

DP
type: SiteQuality
SIO_000300: 2.283246e6

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.82e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.33e0

DP
type: SiteQuality
SIO_000300: 2.283044e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 9.68e-1

FS
type: SiteQuality
SIO_000300: 8.61e-1

QD
type: SiteQuality
SIO_000300: 1.021e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -2.112e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1973
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 2.027e0

DP
type: SiteQuality
SIO_000300: 2.280582e6

QD
type: SiteQuality
SIO_000300: 1.513e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.625e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.825e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 2.688e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.856e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65934
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.728e0

FS
type: SiteQuality
SIO_000300: 1.809e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 2.281359e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

QD
type: SiteQuality
SIO_000300: 1.241e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 15

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7864
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.479709267110841e-4
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 9.086503513448025e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65954
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Latino
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allele frequency: 1.731601731601732e-4
allele num: 11550
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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SIO_000300: 5.898e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 3.032876379958753e-5
allele num: 65944
num of homozygotes: 0

African
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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QD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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DP
type: SiteQuality
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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QD
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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African
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South Asian
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QD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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VQSLOD
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FS
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517404631118934e-5
allele num: 65902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939487975174554e-4
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.280093e6

MQ
type: SiteQuality
SIO_000300: 5.855e1

FS
type: SiteQuality
SIO_000300: 2.296e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.946e-1

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4555
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.279544e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.926e0

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.017e0

QD
type: SiteQuality
SIO_000300: 1.482e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4549
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17514
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3811
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51804960986125e-5
allele num: 65874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.73e-1

FS
type: SiteQuality
SIO_000300: 1.847e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.149e0

QD
type: SiteQuality
SIO_000300: 1.305e1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 2.27798e6

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3807
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17504
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.609e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 3.299e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.8e-2

QD
type: SiteQuality
SIO_000300: 2.494e1

MQ
type: SiteQuality
SIO_000300: 5.818e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.159e0

DP
type: SiteQuality
SIO_000300: 2.273567e6

GenotypeQuality
all individuals: 3106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17503
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3793
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.560934079299441e-5
allele num: 65776
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.208e0

DP
type: SiteQuality
SIO_000300: 2.264769e6

QD
type: SiteQuality
SIO_000300: 1.127e1

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

FS
type: SiteQuality
SIO_000300: 2.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.86e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3