X-106184889-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106184889
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106184889
    reference: chr 0
allele count: 1
allele frequency: 1.232544094264972e-5
allele num: 81133
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.633C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2661-27C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2623-27C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1867-27C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51571C>T
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25486
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

X-106184892-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106184892
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106184892
    reference: chr 0
allele count: 1
allele frequency: 1.240110121778814e-5
allele num: 80638
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2661-30C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1867-30C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51568C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.630C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2623-30C>G
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
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genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

X-106184896-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106184896
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106184896
    reference: chr 0
allele count: 9
allele frequency: 1.120838885637072e-4
allele num: 80297
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.626A>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2661-34A>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1867-34A>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2623-34A>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51564A>T
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8269
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

X-106184896-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106184896
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106184896
    reference: chr 0
allele count: 2
allele frequency: 2.490753079193494e-5
allele num: 80297
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1867-34A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2623-34A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2661-34A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51564A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.626A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3554
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3625
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5020
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

X-106184910-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106184910
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106184909
    reference: chr 0
allele count: 1
allele frequency: 1.282084156004e-5
allele num: 77998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1867-49delT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.611delT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2661-49delT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51549delT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2623-49delT
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11472
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 140
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: TA
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-106185126-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185126
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185127
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81219
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+79dupT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2660+41dupT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+79dupT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51333dupT
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.395dupT
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3092
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2970
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

X-106185134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185134
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185134
    reference: chr 0
allele count: 79
allele frequency: 9.71470732907034e-4
allele num: 81320
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2660+34G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+72G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51326G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.388G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+72G>A
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 737
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  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 10
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2065
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  variant carriers: 4
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

X-106185143-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185143
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185143
    reference: chr 0
allele count: 1
allele frequency: 1.225970969007454e-5
allele num: 81568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51317A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.379A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2660+25A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+63A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+63A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

X-106185155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185155
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185155
    reference: chr 0
allele count: 1
allele frequency: 1.219571686423728e-5
allele num: 81996
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2660+13G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51305G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+51G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.367G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+51G>A
  variant of: http://identifiers.org/hgnc/23485
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31371
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

X-106185188-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185188
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185188
    reference: chr 0
allele count: 1
allele frequency: 1.177856301531213e-5
allele num: 84900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+18A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.334A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2640A>G
  hgvsp: ENST00000355610.4:c.2640A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+18A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51272A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31375
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 33
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 51
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro880Pro
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

X-106185196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185196
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185196
    reference: chr 0
allele count: 6
allele frequency: 7.020499859590003e-5
allele num: 85464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51264C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2622+10C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1866+10C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.326C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2632C>T
  hgvsp: ENSP00000347821.4:p.Arg878Trp
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg878Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

X-106185220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185220
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185220
    reference: chr 0
allele count: 2
allele frequency: 2.29840146178333e-5
allele num: 87017
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.302C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2608C>T
  hgvsp: ENST00000255495.7:c.2608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1852C>T
  hgvsp: ENST00000535534.1:c.1852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2608C>T
  hgvsp: ENST00000355610.4:c.2608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51240C>T
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 640
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31379
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 154
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu870Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-106185235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185235
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185235
    reference: chr 0
allele count: 3
allele frequency: 3.431866019950581e-5
allele num: 87416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2593A>G
  hgvsp: ENSP00000255495.7:p.Thr865Ala
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.287A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1837A>G
  hgvsp: ENSP00000440359.1:p.Thr613Ala
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2593A>G
  hgvsp: ENSP00000347821.4:p.Thr865Ala
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51225A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 163
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3448
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genotype depth: GenotypeDepth
  all individuals: 198
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 90
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
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genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr865Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-106185273-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185273
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185273
    reference: chr 0
allele count: 1
allele frequency: 1.140549973197076e-5
allele num: 87677
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1799A>G
  hgvsp: ENSP00000440359.1:p.Glu600Gly
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.249A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2555A>G
  hgvsp: ENSP00000255495.7:p.Glu852Gly
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2555A>G
  hgvsp: ENSP00000347821.4:p.Glu852Gly
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51187A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
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genotype depth: GenotypeDepth
  all individuals: 8537
  bin: 2.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
hgvs: p.Glu852Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

X-106185281-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185281
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185281
    reference: chr 0
allele count: 1
allele frequency: 1.140575990875392e-5
allele num: 87675
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2547C>G
  hgvsp: ENST00000255495.7:c.2547C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51179C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2547C>G
  hgvsp: ENST00000355610.4:c.2547C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.241C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1791C>G
  hgvsp: ENST00000535534.1:c.1791C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3332
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hgvs: p.Thr849Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-106185284-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185284
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185284
    reference: chr 0
allele count: 1
allele frequency: 1.140341874493973e-5
allele num: 87693
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.238A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1788A>G
  hgvsp: ENST00000535534.1:c.1788A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51176A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2544A>G
  hgvsp: ENST00000355610.4:c.2544A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2544A>G
  hgvsp: ENST00000255495.7:c.2544A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg848Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS

X-106185312-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185312
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185312
    reference: chr 0
allele count: 1
allele frequency: 1.140068860159154e-5
allele num: 87714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51148T>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2516T>G
  hgvsp: ENSP00000347821.4:p.Phe839Cys
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1760T>G
  hgvsp: ENSP00000440359.1:p.Phe587Cys
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.210T>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2516T>G
  hgvsp: ENSP00000255495.7:p.Phe839Cys
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8
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genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe839Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-106185324-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185324
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185324
    reference: chr 0
allele count: 1
allele frequency: 1.140016872249709e-5
allele num: 87718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1748G>A
  hgvsp: ENSP00000440359.1:p.Arg583His
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2504G>A
  hgvsp: ENSP00000347821.4:p.Arg835His
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.198G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2504G>A
  hgvsp: ENSP00000255495.7:p.Arg835His
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51136G>A
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg835His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-106185327-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185327
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185327
    reference: chr 0
allele count: 3
allele frequency: 3.419972640218878e-5
allele num: 87720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2501A>G
  hgvsp: ENSP00000255495.7:p.Tyr834Cys
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1745A>G
  hgvsp: ENSP00000440359.1:p.Tyr582Cys
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51133A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2501A>G
  hgvsp: ENSP00000347821.4:p.Tyr834Cys
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.195A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8728
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr834Cys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

X-106185334-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185334
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185334
    reference: chr 0
allele count: 1
allele frequency: 1.140068860159154e-5
allele num: 87714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.188A>C
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2494A>C
  hgvsp: ENSP00000255495.7:p.Met832Leu
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51126A>C
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1738A>C
  hgvsp: ENSP00000440359.1:p.Met580Leu
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2494A>C
  hgvsp: ENSP00000347821.4:p.Met832Leu
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 31386
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met832Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-106185337-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185337
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185337
    reference: chr 0
allele count: 1
allele frequency: 1.140120852810398e-5
allele num: 87710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1735C>G
  hgvsp: ENSP00000440359.1:p.His579Asp
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2491C>G
  hgvsp: ENSP00000347821.4:p.His831Asp
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51123C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2491C>G
  hgvsp: ENSP00000255495.7:p.His831Asp
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.185C>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4142
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His831Asp
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ

19-52380558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380558
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380558
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.260C>T
  hgvsp: ENSP00000394828.1:p.Ala87Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.260C>T
  hgvsp: ENSP00000301399.5:p.Ala87Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.260C>T
  hgvsp: ENSP00000413476.1:p.Ala87Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.260C>T
  hgvsp: ENSP00000404509.1:p.Ala87Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1538C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.377C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.260C>T
  hgvsp: ENSP00000389652.2:p.Ala87Val
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15849
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala87Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

19-52380561-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380561
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380561
    reference: chr 19
allele count: 4
allele frequency: 3.295381522795802e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1535G>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.257G>C
  hgvsp: ENSP00000394828.1:p.Gly86Ala
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.257G>C
  hgvsp: ENSP00000404509.1:p.Gly86Ala
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.257G>C
  hgvsp: ENSP00000413476.1:p.Gly86Ala
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.257G>C
  hgvsp: ENSP00000301399.5:p.Gly86Ala
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.257G>C
  hgvsp: ENSP00000389652.2:p.Gly86Ala
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.374G>C
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15857
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly86Ala
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-52380565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380565
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380565
    reference: chr 19
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.253G>A
  hgvsp: ENSP00000389652.2:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.253G>A
  hgvsp: ENSP00000301399.5:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1531G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.253G>A
  hgvsp: ENSP00000413476.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.253G>A
  hgvsp: ENSP00000394828.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.370G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.253G>A
  hgvsp: ENSP00000404509.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3923
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu85Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-52380567-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380567
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380567
    reference: chr 19
allele count: 2838
allele frequency: 2.337957623488318e-2
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1529C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.251C>T
  hgvsp: ENSP00000404509.1:p.Ala84Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.251C>T
  hgvsp: ENSP00000301399.5:p.Ala84Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.251C>T
  hgvsp: ENSP00000389652.2:p.Ala84Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.251C>T
  hgvsp: ENSP00000394828.1:p.Ala84Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.251C>T
  hgvsp: ENSP00000413476.1:p.Ala84Val
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.368C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 11741
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 5.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 8.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 8.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 9.75e1
  variant carriers: 1750
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 6.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala84Val
num of homozygotes: 226
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-106185358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185358
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185358
    reference: chr 0
allele count: 1
allele frequency: 1.14028986168284e-5
allele num: 87697
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.164G>A
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2470G>A
  hgvsp: ENSP00000255495.7:p.Gly824Ser
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2470G>A
  hgvsp: ENSP00000347821.4:p.Gly824Ser
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1714G>A
  hgvsp: ENSP00000440359.1:p.Gly572Ser
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51102G>A
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8039
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31388
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly824Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

X-106185363-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185363
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185363
    reference: chr 0
allele count: 3
allele frequency: 3.421181676150943e-5
allele num: 87689
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51097C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2465C>T
  hgvsp: ENSP00000255495.7:p.Ala822Val
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.159C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1709C>T
  hgvsp: ENSP00000440359.1:p.Ala570Val
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2465C>T
  hgvsp: ENSP00000347821.4:p.Ala822Val
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31386
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala822Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

X-106185380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185380
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185380
    reference: chr 0
allele count: 13
allele frequency: 1.484323262770889e-4
allele num: 87582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.142C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1692C>T
  hgvsp: ENST00000535534.1:c.1692C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51080C>T
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2448C>T
  hgvsp: ENST00000355610.4:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2448C>T
  hgvsp: ENST00000255495.7:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 45
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 3083
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile816Ile
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

X-106185380-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185380
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185380
    reference: chr 0
allele count: 1
allele frequency: 1.141787125208376e-5
allele num: 87582
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2448C>G
  hgvsp: ENSP00000347821.4:p.Ile816Met
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1692C>G
  hgvsp: ENSP00000440359.1:p.Ile564Met
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2448C>G
  hgvsp: ENSP00000255495.7:p.Ile816Met
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51080C>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.142C>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
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genotype depth: GenotypeDepth
  all individuals: 71
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genotype depth: GenotypeDepth
  all individuals: 8565
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 41
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genotype quality: GenotypeQuality
  all individuals: 32
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  variant carriers: 0
hgvs: p.Ile816Met
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

X-106185395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185395
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185395
    reference: chr 0
allele count: 1
allele frequency: 1.148488015527558e-5
allele num: 87071
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2433A>G
  hgvsp: ENST00000355610.4:c.2433A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2433A>G
  hgvsp: ENST00000255495.7:c.2433A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1677A>G
  hgvsp: ENST00000535534.1:c.1677A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51065A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.127A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln811Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

X-106185401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24106185401
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24106185401
    reference: chr 0
allele count: 2
allele frequency: 2.300675248185343e-5
allele num: 86931
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000255495
  ensembl transcript: ENST00000255495
  gene symbol: MORC4
  hgvsc: ENST00000255495.7:c.2427A>G
  hgvsp: ENST00000255495.7:c.2427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000440359
  ensembl transcript: ENST00000535534
  gene symbol: MORC4
  hgvsc: ENST00000535534.1:c.1671A>G
  hgvsp: ENST00000535534.1:c.1671A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000347821
  ensembl transcript: ENST00000355610
  gene symbol: MORC4
  hgvsc: ENST00000355610.4:c.2427A>G
  hgvsp: ENST00000355610.4:c.2427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133131
  ensembl transcript: ENST00000478924
  gene symbol: MORC4
  hgvsc: ENST00000478924.1:n.121A>G
  variant of: http://identifiers.org/hgnc/23485
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133131
  ensembl protein: ENSP00000474750
  ensembl transcript: ENST00000604604
  gene symbol: MORC4
  hgvsc: ENST00000604604.1:c.111+51059A>G
  variant of: http://identifiers.org/hgnc/23485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1709
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hgvs: p.Lys809Lys
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-52380570-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380570
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380570
    reference: chr 19
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.248T>G
  hgvsp: ENSP00000404509.1:p.Ile83Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.248T>G
  hgvsp: ENSP00000389652.2:p.Ile83Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.248T>G
  hgvsp: ENSP00000301399.5:p.Ile83Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.248T>G
  hgvsp: ENSP00000413476.1:p.Ile83Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1526T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.248T>G
  hgvsp: ENSP00000394828.1:p.Ile83Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.365T>G
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4768
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20045
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16305
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile83Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-52380573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380573
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380573
    reference: chr 19
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.245G>A
  hgvsp: ENSP00000413476.1:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.245G>A
  hgvsp: ENSP00000301399.5:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.245G>A
  hgvsp: ENSP00000389652.2:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.362G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.245G>A
  hgvsp: ENSP00000404509.1:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.245G>A
  hgvsp: ENSP00000394828.1:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1523G>A
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4767
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly82Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

19-52380575-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380575
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380576
    reference: chr 19
allele count: 5
allele frequency: 4.118887570844866e-5
allele num: 121392
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.242dupC
  hgvsp: ENSP00000413476.1:p.Gly82ArgfsTer19
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1520dupC
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.242dupC
  hgvsp: ENSP00000389652.2:p.Gly82ArgfsTer19
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.242dupC
  hgvsp: ENSP00000301399.5:p.Gly82ArgfsTer20
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.242dupC
  hgvsp: ENSP00000404509.1:p.Gly82ArgfsTer20
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.242dupC
  hgvsp: ENSP00000394828.1:p.Gly82ArgfsTer?
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.359dupC
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20045
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly82ArgfsTer20
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

19-52380579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380579
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380579
    reference: chr 19
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.239C>T
  hgvsp: ENSP00000413476.1:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.239C>T
  hgvsp: ENSP00000394828.1:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.239C>T
  hgvsp: ENSP00000301399.5:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.239C>T
  hgvsp: ENSP00000404509.1:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.239C>T
  hgvsp: ENSP00000389652.2:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1517C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.356C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro80Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-52380596-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380596
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380596
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.222G>C
  hgvsp: ENSP00000389652.2:p.Lys74Asn
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.222G>C
  hgvsp: ENSP00000413476.1:p.Lys74Asn
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.222G>C
  hgvsp: ENSP00000394828.1:p.Lys74Asn
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.222G>C
  hgvsp: ENSP00000404509.1:p.Lys74Asn
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.222G>C
  hgvsp: ENSP00000301399.5:p.Lys74Asn
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1500G>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.339G>C
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20043
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys74Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-52380597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380597
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380597
    reference: chr 19
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.221A>G
  hgvsp: ENSP00000301399.5:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1499A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.221A>G
  hgvsp: ENSP00000404509.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.221A>G
  hgvsp: ENSP00000389652.2:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.338A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.221A>G
  hgvsp: ENSP00000394828.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.221A>G
  hgvsp: ENSP00000413476.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys74Arg
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-52380599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380599
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380599
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.219C>T
  hgvsp: ENST00000301399.5:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.219C>T
  hgvsp: ENST00000458390.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.336C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.219C>T
  hgvsp: ENST00000451628.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1497C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.219C>T
  hgvsp: ENST00000412216.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.219C>T
  hgvsp: ENST00000420592.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe73Phe
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52380602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380602
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380602
    reference: chr 19
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.216C>T
  hgvsp: ENST00000420592.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.216C>T
  hgvsp: ENST00000451628.2:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.216C>T
  hgvsp: ENST00000458390.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.333C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.216C>T
  hgvsp: ENST00000412216.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1494C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.216C>T
  hgvsp: ENST00000301399.5:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20041
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7206
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu72Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

19-52380605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380605
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380605
    reference: chr 19
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.330G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.213G>A
  hgvsp: ENST00000412216.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.213G>A
  hgvsp: ENST00000458390.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.213G>A
  hgvsp: ENST00000301399.5:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1491G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.213G>A
  hgvsp: ENST00000420592.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.213G>A
  hgvsp: ENST00000451628.2:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser71Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

19-52380606-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380606
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380606
    reference: chr 19
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.329C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.212C>T
  hgvsp: ENSP00000394828.1:p.Ser71Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.212C>T
  hgvsp: ENSP00000413476.1:p.Ser71Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.212C>T
  hgvsp: ENSP00000404509.1:p.Ser71Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.212C>T
  hgvsp: ENSP00000389652.2:p.Ser71Leu
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1490C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.212C>T
  hgvsp: ENSP00000301399.5:p.Ser71Leu
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser71Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

19-52380611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380611
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380611
    reference: chr 19
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.207A>G
  hgvsp: ENST00000420592.1:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.207A>G
  hgvsp: ENST00000458390.1:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.324A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1485A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.207A>G
  hgvsp: ENST00000412216.1:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.207A>G
  hgvsp: ENST00000451628.2:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.207A>G
  hgvsp: ENST00000301399.5:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16260
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro69Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

19-52380617-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380617
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380617
    reference: chr 19
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.201C>A
  hgvsp: ENST00000451628.2:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.318C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.201C>A
  hgvsp: ENST00000412216.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.201C>A
  hgvsp: ENST00000301399.5:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.201C>A
  hgvsp: ENST00000458390.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1479C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.201C>A
  hgvsp: ENST00000420592.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16179
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr67Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

19-52380623-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380623
    reference: chr 19
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.195A>T
  hgvsp: ENST00000458390.1:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.195A>T
  hgvsp: ENST00000451628.2:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.312A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1473A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.195A>T
  hgvsp: ENST00000420592.1:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.195A>T
  hgvsp: ENST00000412216.1:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.195A>T
  hgvsp: ENST00000301399.5:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg65Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-52380624-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380624
    reference: chr 19
allele count: 21
allele frequency: 1.731387583477616e-4
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.194G>C
  hgvsp: ENSP00000389652.2:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.194G>C
  hgvsp: ENSP00000394828.1:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1472G>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.194G>C
  hgvsp: ENSP00000404509.1:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.311G>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.194G>C
  hgvsp: ENSP00000301399.5:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.194G>C
  hgvsp: ENSP00000413476.1:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg65Pro
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-52380624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380624
    reference: chr 19
allele count: 6
allele frequency: 4.946821667078902e-5
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.194G>A
  hgvsp: ENSP00000404509.1:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.194G>A
  hgvsp: ENSP00000301399.5:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.194G>A
  hgvsp: ENSP00000413476.1:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.194G>A
  hgvsp: ENSP00000394828.1:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1472G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.311G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.194G>A
  hgvsp: ENSP00000389652.2:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg65Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

19-52380625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380625
    reference: chr 19
allele count: 255
allele frequency: 2.102572559366755e-3
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1471C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.310C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.193C>T
  hgvsp: ENSP00000394828.1:p.Arg65Ter
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.193C>T
  hgvsp: ENSP00000413476.1:p.Arg65Ter
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.193C>T
  hgvsp: ENSP00000404509.1:p.Arg65Ter
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.193C>T
  hgvsp: ENSP00000389652.2:p.Arg65Ter
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.193C>T
  hgvsp: ENSP00000301399.5:p.Arg65Ter
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11571
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6108
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 9.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 8.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg65Ter
num of homozygotes: 2
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-52380626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380626
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380626
    reference: chr 19
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1470T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.192T>C
  hgvsp: ENST00000458390.1:c.192T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.192T>C
  hgvsp: ENST00000451628.2:c.192T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.192T>C
  hgvsp: ENST00000301399.5:c.192T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.192T>C
  hgvsp: ENST00000412216.1:c.192T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.309T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.192T>C
  hgvsp: ENST00000420592.1:c.192T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19928
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr64Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ

19-52380627-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380627
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380628
    reference: chr 19
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.190dupT
  hgvsp: ENSP00000404509.1:p.Tyr64LeufsTer38
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.190dupT
  hgvsp: ENSP00000389652.2:p.Tyr64LeufsTer37
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1468dupT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.307dupT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.190dupT
  hgvsp: ENSP00000413476.1:p.Tyr64LeufsTer37
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.190dupT
  hgvsp: ENSP00000301399.5:p.Tyr64LeufsTer38
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.190dupT
  hgvsp: ENSP00000394828.1:p.Tyr64LeufsTer?
  variant of: http://identifiers.org/hgnc/28673
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19929
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr64LeufsTer38
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-52380641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380641
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380641
    reference: chr 19
allele count: 124
allele frequency: 1.023271166859218e-3
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-11C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-11C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-11C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-11C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-11C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1455C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-11C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8521
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6119
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-52380650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380650
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380650
    reference: chr 19
allele count: 1525
allele frequency: 1.259373038681333e-2
allele num: 121092
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-20C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-20C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1446C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-20C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-20C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-20C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-20C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12104
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 5.25e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 4.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11297
  bin: 2.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 6.25e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 8459
  bin: 3.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 5.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 4.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 9.75e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15064
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 24
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

19-52380656-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380656
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380656
    reference: chr 19
allele count: 2
allele frequency: 1.652046059044126e-5
allele num: 121062
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-26A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-26A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1440A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-26A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-26A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-26A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-26A>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19156
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-52380659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380659
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380659
    reference: chr 19
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-29C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-29C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-29C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1437C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-29C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-29C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-29C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/19-52380661-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380661
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380661
    reference: chr 19
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-31T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-31T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-31T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1435T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-31T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-31T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-31T>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7055
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13917
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-52380662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380662
    reference: chr 19
allele count: 1
allele frequency: 8.267332462507647e-6
allele num: 120958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1434G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-32G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-32G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-32G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-32G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-32G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-32G>A
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7004
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

19-52380663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380663
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380663
    reference: chr 19
allele count: 18
allele frequency: 1.488242881238218e-4
allele num: 120948
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-33C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-33C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-33C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-33C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-33C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1433C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-33C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11950
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8585
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19160
  bin: 9.75e1
  variant carriers: 16
num of homozygotes: 1
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

19-52380666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380666
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380666
    reference: chr 19
allele count: 2
allele frequency: 1.653575857792476e-5
allele num: 120950
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1430A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-36A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-36A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-36A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-36A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-36A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-36A>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8556
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4728
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52380667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380667
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380667
    reference: chr 19
allele count: 2
allele frequency: 1.654122901331569e-5
allele num: 120910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-37C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-37C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-37C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-37C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-37C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1429C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-37C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6836
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

19-52380667-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380667
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380667
    reference: chr 19
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-37C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1429C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-37C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-37C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-37C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-37C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-37C>A
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19141
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4720
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

19-52380678-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380678
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380678
    reference: chr 19
allele count: 1
allele frequency: 8.297240337863626e-6
allele num: 120522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-48C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-48C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-48C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-48C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-48C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1418C>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-48C>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19105
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-52380681-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52380681
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52380681
    reference: chr 19
allele count: 21831
allele frequency: 1.818583186165073e-1
allele num: 120044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.188-51A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.188-51A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.1415A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.305-51A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.188-51A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.188-51A>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.188-51A>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 4.25e1
  variant carriers: 1813
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 406
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 3.75e1
  variant carriers: 2422
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.25e1
  variant carriers: 2948
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 2277
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 1.75e1
  variant carriers: 1607
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 8927
  bin: 2.75e1
  variant carriers: 2750
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 4.75e1
  variant carriers: 1299
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.75e1
  variant carriers: 746
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.25e1
  variant carriers: 633
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 5.25e1
  variant carriers: 841
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 6.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.25e1
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 5.75e1
  variant carriers: 568
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 5.25e1
  variant carriers: 140
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1901
  bin: 7.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 4.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 6.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 8.75e1
  variant carriers: 105
num of homozygotes: 2609
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-52381591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381591
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381591
    reference: chr 19
allele count: 1
allele frequency: 8.330278897737497e-6
allele num: 120044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+51C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.505C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+51C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+51C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+51C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+51C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+51C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3821
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-52381592-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381592
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381592
    reference: chr 19
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+50A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+50A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+50A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+50A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+50A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.504A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+50A>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3824
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4994
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-52381596-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381596
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381595
    reference: chr 19
allele count: 2
allele frequency: 1.667000066680003e-5
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+45delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+45delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+45delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+45delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+45delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.499delT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+45delT
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4930
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: CA
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-52381597-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381597
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381597
    reference: chr 19
allele count: 4
allele frequency: 3.330502406287988e-5
allele num: 120102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+45T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.499T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+45T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+45T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+45T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+45T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+45T>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10734
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20905
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

19-52381603-TAAGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381603
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381599
    reference: chr 19
allele count: 2
allele frequency: 1.664391997603276e-5
allele num: 120164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+35_304+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.489_492delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+35_187+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+35_187+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+35_187+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+35_187+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+35_187+38delTCTT
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: TAAGA
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-52381604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381604
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381604
    reference: chr 19
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+38T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+38T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.492T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+38T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+38T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+38T>C
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+38T>C
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7951
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5036
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20933
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9607
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-52381607-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381607
    reference: chr 19
allele count: 1
allele frequency: 8.317253310266817e-6
allele num: 120232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+35T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+35T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+35T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+35T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+35T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.489T>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+35T>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11039
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-52381616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381616
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381616
    reference: chr 19
allele count: 22052
allele frequency: 1.827796565214508e-1
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+26C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+26C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+26C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+26C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.480C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+26C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+26C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 5.75e1
  variant carriers: 1145
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 3.25e1
  variant carriers: 2183
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.25e1
  variant carriers: 1723
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 2.75e1
  variant carriers: 1795
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 2.25e1
  variant carriers: 1235
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.25e1
  variant carriers: 723
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.75e1
  variant carriers: 642
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 9.75e1
  variant carriers: 1012
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 2159
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 4.25e1
  variant carriers: 2592
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 3.75e1
  variant carriers: 2618
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 422
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 7.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 6.75e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 32759
  bin: 9.75e1
  variant carriers: 18357
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 4
num of homozygotes: 2667
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-52381616-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381616
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381616
    reference: chr 19
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+26C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+26C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+26C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+26C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+26C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.480C>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+26C>A
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-52381624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381624
    reference: chr 19
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+18G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.472G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+18G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+18G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+18G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+18G>A
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+18G>A
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25035
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-52381625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381625
    reference: chr 19
allele count: 5
allele frequency: 4.132777887985188e-5
allele num: 120984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+17C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+17C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+17C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+17C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+17C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.471C>T
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+17C>T
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

19-52381630-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52381630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52381630
    reference: chr 19
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000394828
  ensembl transcript: ENST00000412216
  gene symbol: ZNF577
  hgvsc: ENST00000412216.1:c.187+12A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000301399
  ensembl transcript: ENST00000301399
  gene symbol: ZNF577
  hgvsc: ENST00000301399.5:c.187+12A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000485702
  gene symbol: ZNF577
  hgvsc: ENST00000485702.1:n.304+12A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000413476
  ensembl transcript: ENST00000420592
  gene symbol: ZNF577
  hgvsc: ENST00000420592.1:c.187+12A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161551
  ensembl transcript: ENST00000477228
  gene symbol: ZNF577
  hgvsc: ENST00000477228.1:n.466A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000389652
  ensembl transcript: ENST00000451628
  gene symbol: ZNF577
  hgvsc: ENST00000451628.2:c.187+12A>G
  variant of: http://identifiers.org/hgnc/28673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161551
  ensembl protein: ENSP00000404509
  ensembl transcript: ENST00000458390
  gene symbol: ZNF577
  hgvsc: ENST00000458390.1:c.187+12A>G
  variant of: http://identifiers.org/hgnc/28673
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8195
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.19823701391484e-5
allele num: 45491
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4309
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.265823e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.122e1

GenotypeQuality
all individuals: 902
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3370
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4595
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 563
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.208822035208623e-5
allele num: 45273
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7015
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6427
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e0

DP
type: SiteQuality
SIO_000300: 1.239853e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.968e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

QD
type: SiteQuality
SIO_000300: 3.36e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 23570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6891
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6395
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.993576254291727e-4
allele num: 45145
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8855
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8167
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4278
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

DP
type: SiteQuality
SIO_000300: 1.223116e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

QD
type: SiteQuality
SIO_000300: 2.146e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeQuality
all individuals: 23570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.215084726990808e-5
allele num: 45145
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8167
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6891
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8855
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.563721657544957e-4
allele num: 6395
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4278
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.146e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.223116e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

GenotypeQuality
all individuals: 3604
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5694
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15757
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6263
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.275002275002275e-5
allele num: 43956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8683
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8049
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6321
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.716e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.186377e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.906e0

QD
type: SiteQuality
SIO_000300: 7.86e0

GenotypeQuality
all individuals: 3547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46151
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4505
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9171
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.534e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

DP
type: SiteQuality
SIO_000300: 2.714495e6

GenotypeQuality
all individuals: 6717
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2498
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3002
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 5.628071086867112e-4
allele num: 46197
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9179
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.508771929824561e-3
allele num: 570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 9.316770186335404e-3
allele num: 4508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6561
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.514896482073725e-3
allele num: 5941
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.724182e6

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.301e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.85e-1

FS
type: SiteQuality
SIO_000300: 9.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.952e0

QD
type: SiteQuality
SIO_000300: 1.98e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1700
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7047
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8373
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9193
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.217294900221729e-4
allele num: 4510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46289
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 575
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

DP
type: SiteQuality
SIO_000300: 2.73297e6

QD
type: SiteQuality
SIO_000300: 3.145e1

VQSLOD
type: SiteQuality
SIO_000300: -9.825e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

MQ
type: SiteQuality
SIO_000300: 5.871e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 577
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46437
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8395
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.086602194936434e-4
allele num: 9203
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.014e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

QD
type: SiteQuality
SIO_000300: 2.586e1

DP
type: SiteQuality
SIO_000300: 2.743825e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3081
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3872
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.109482122139015e-5
allele num: 47405
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8479
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.402e0

MQRankSum
type: SiteQuality
SIO_000300: -1.008e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.87e-1

DP
type: SiteQuality
SIO_000300: 2.78353e6

QD
type: SiteQuality
SIO_000300: 1.292e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
all individuals: 31376
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47539
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9249
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8421
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 9.049773755656109e-4
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8489
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.16e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

DP
type: SiteQuality
SIO_000300: 2.793258e6

QD
type: SiteQuality
SIO_000300: 1.501e1

GenotypeQuality
all individuals: 753
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47821
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.15633423180593e-4
allele num: 9275
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

DP
type: SiteQuality
SIO_000300: 2.82007e6

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

FS
type: SiteQuality
SIO_000300: 4.594e0

MQRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.379e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.89e-2

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
SIO_000300: 1.176e1

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31380
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3084
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47913
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.022974607013301e-4
allele num: 9924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

DP
type: SiteQuality
SIO_000300: 2.829319e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.225e1

FS
type: SiteQuality
SIO_000300: 5.271e0

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31382
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 1.506931886678722e-4
allele num: 6636
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.084853539038883e-5
allele num: 47965
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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DP
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MQ
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FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele num: 8515
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East Asian
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.08415831266543e-5
allele num: 47981
num of homozygotes: 0

ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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QD
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MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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African
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allele num: 8515
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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MQRankSum
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MQ
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 6.622516556291391e-4
allele num: 4530
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9300
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele num: 8515
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 8515
num of homozygotes: 0

Other
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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MQRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66714
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East Asian
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South Asian
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European (Finnish)
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African
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Latino
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Other
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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FS
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Other
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Latino
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African
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European (Non-Finnish)
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ClippingRankSum
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MQ
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21556
bin: 9.75e1
variant carriers: 2612

GenotypeQuality
all individuals: 3795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 148
allele frequency: 1.278507256392536e-2
allele num: 11576
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2071
allele frequency: 1.990197962713819e-1
allele num: 10406
num of homozygotes: 217

European (Non-Finnish)
type: Population
allele count: 588
allele frequency: 8.811893058386285e-3
allele num: 66728
num of homozygotes: 6

Other
type: Population
allele count: 10
allele frequency: 1.101321585903084e-2
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.090776875530239e-3
allele num: 16502
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.802955e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.377e1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.753e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.273e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-1

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4140
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084418968212611e-5
allele num: 47975
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.699e0

VQSLOD
type: SiteQuality
SIO_000300: -3.189e0

QD
type: SiteQuality
SIO_000300: 3.415e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.95e-2

DP
type: SiteQuality
SIO_000300: 2.838204e6

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4135
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.169011735768036e-5
allele num: 47973
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9307
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.382e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.04e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.009e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 2.838506e6

VQSLOD
type: SiteQuality
SIO_000300: -1.699e0

QD
type: SiteQuality
SIO_000300: 2.407e1

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31390
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074575542660649e-4
allele num: 9306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.502189415738772e-4
allele num: 47958
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.140000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.812e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.776e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.644e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 2.836422e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

GenotypeQuality
all individuals: 2172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.994003597841295e-5
allele num: 10006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.644e0

QD
type: SiteQuality
SIO_000300: 1.812e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.776e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.140000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.836422e6

GenotypeQuality
all individuals: 1196
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9599
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074806534823732e-4
allele num: 9304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.145e1

MQ
type: SiteQuality
SIO_000300: 5.853e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 2.819688e6

MQRankSum
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.097e0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.349900129244507e-4
allele num: 8511
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9497
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47833
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.109e0

QD
type: SiteQuality
SIO_000300: 1.776e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.577e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -7.742e-1

DP
type: SiteQuality
SIO_000300: 2.815605e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.01e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 3944
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.589777e6

FS
type: SiteQuality
SIO_000300: 1.098e0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

QD
type: SiteQuality
SIO_000300: 1.366e1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20044
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.589774e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

QD
type: SiteQuality
SIO_000300: 1.154e1

MQRankSum
type: SiteQuality
SIO_000300: 9.81e-1

FS
type: SiteQuality
SIO_000300: 3.926e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.29e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 4767
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.493106342165208e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.23e-1

DP
type: SiteQuality
SIO_000300: 2.589922e6

QD
type: SiteQuality
SIO_000300: 1.211e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20045
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4766
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
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European (Non-Finnish)
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East Asian
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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FS
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Other
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
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ReadPosRankSum
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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South Asian
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African
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East Asian
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VQSLOD
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Latino
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DP
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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South Asian
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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FS
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VQSLOD
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MQ
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QD
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BaseQRankSum
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SIO_000300: -2.553e0

DP
type: SiteQuality
SIO_000300: 2.587386e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20044
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.733302519066328e-3
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.000420029402058e-5
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.588551e6

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

QD
type: SiteQuality
SIO_000300: 1.387e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 3213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16089
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20044
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4761
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.642102707296346e-4
allele num: 16474
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.387e1

DP
type: SiteQuality
SIO_000300: 2.588551e6

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20082
bin: 9.75e1
variant carriers: 253

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4753
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variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3933
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7174
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 66
allele frequency: 9.900396015840634e-4
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 92
allele frequency: 1.06333795654184e-2
allele num: 8652
num of homozygotes: 1

South Asian
type: Population
allele count: 5
allele frequency: 3.036191401505951e-4
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 19
allele frequency: 2.873563218390805e-3
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 67
allele frequency: 5.790838375108038e-3
allele num: 11570
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

FS
type: SiteQuality
SIO_000300: 6.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 2.596527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 4777
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variant carriers: 0

GenotypeQuality
all individuals: 3221
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 3218
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variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.583491e6

MQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e0

QD
type: SiteQuality
SIO_000300: 1.504e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.828e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 4777
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7204
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

DP
type: SiteQuality
SIO_000300: 2.583471e6

FS
type: SiteQuality
SIO_000300: 6.548e0

MQ
type: SiteQuality
SIO_000300: 6.049e1

QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 3948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19952
bin: 9.75e1
variant carriers: 123

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.352916454024196e-4
allele num: 66622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 92
allele frequency: 1.391409558378705e-2
allele num: 6612
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.028e0

DP
type: SiteQuality
SIO_000300: 2.581125e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7040
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20307
bin: 9.75e1
variant carriers: 1496

Latino
type: Population
allele count: 717
allele frequency: 6.205643067335988e-2
allele num: 11554
num of homozygotes: 18

South Asian
type: Population
allele count: 222
allele frequency: 1.35498046875e-2
allele num: 16384
num of homozygotes: 5

African
type: Population
allele count: 24
allele frequency: 2.306805074971165e-3
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 14
allele frequency: 1.548672566371681e-2
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 364
allele frequency: 5.466450411485553e-3
allele num: 66588
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 184
allele frequency: 2.783661119515885e-2
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.593038e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.966e0

VQSLOD
type: SiteQuality
SIO_000300: 6.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

QD
type: SiteQuality
SIO_000300: 1.427e1

GenotypeQuality
all individuals: 422
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7153
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
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variant carriers: 0

GenotypeQuality
all individuals: 3205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4802
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.516e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

DP
type: SiteQuality
SIO_000300: 2.548272e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 1.541e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 669
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4794
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7105
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-1

DP
type: SiteQuality
SIO_000300: 2.544346e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.384e0

QD
type: SiteQuality
SIO_000300: 1.542e1

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3992
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
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variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19150
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

MQ
type: SiteQuality
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DP
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: 1.17e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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BaseQRankSum
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FS
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SIO_000300: 6.058e0

ReadPosRankSum
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InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 1.481e1

VQSLOD
type: SiteQuality
SIO_000300: -5.85e-2

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

South Asian
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allele count: 17
allele frequency: 1.041794337541365e-3
allele num: 16318
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

MQ
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BaseQRankSum
type: SiteQuality
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DP
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SIO_000300: 2.531552e6

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 2.27e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
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allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.554e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

MQRankSum
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QD
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DP
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VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.593e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.288e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.061e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 2.524056e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.524056e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.288e1

InbreedingCoeff
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SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

ReadPosRankSum
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SIO_000300: -1.061e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.754e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
type: SiteQuality
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FS
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BaseQRankSum
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VQSLOD
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DP
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SIO_000300: 2.481424e6

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 46

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 78

GenotypeQuality
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variant carriers: 72

European (Non-Finnish)
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allele count: 7756
allele frequency: 1.171778214231757e-1
allele num: 66190
num of homozygotes: 473

Other
type: Population
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allele frequency: 1.837416481069042e-1
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African
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allele frequency: 1.190889789615904e-1
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South Asian
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allele frequency: 3.830090469698847e-1
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num of homozygotes: 1243

East Asian
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allele count: 2464
allele frequency: 2.898823529411765e-1
allele num: 8500
num of homozygotes: 346

Latino
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allele frequency: 2.39378511235955e-1
allele num: 11392
num of homozygotes: 323

European (Finnish)
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allele count: 1304
allele frequency: 1.986593540524071e-1
allele num: 6564
num of homozygotes: 133

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510391493475109e-5
allele num: 66208
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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allele num: 6612
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African
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South Asian
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Other
type: Population
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
type: SiteQuality
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MQRankSum
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QD
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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African
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East Asian
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allele num: 8614
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European (Non-Finnish)
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allele count: 1
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allele num: 66214
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European (Finnish)
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allele num: 6612
num of homozygotes: 0

Other
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BaseQRankSum
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MQRankSum
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DP
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MQ
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ClippingRankSum
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FS
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7573
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3830
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.268552581504503e-4
allele num: 15766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66190
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

DP
type: SiteQuality
SIO_000300: 2.187431e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.671e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.109e0

GenotypeQuality
all individuals: 2654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7771
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.038282712396594e-5
allele num: 66244
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.188872e6

MQ
type: SiteQuality
SIO_000300: 5.831e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 1.453e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.704e-1

GenotypeQuality
all individuals: 2696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20933
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.259287243420224e-4
allele num: 15882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.606e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.05e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

MQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.93e-2

FS
type: SiteQuality
SIO_000300: 1.123e0

DP
type: SiteQuality
SIO_000300: 2.201607e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.92e-1

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4567
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.183e0

FS
type: SiteQuality
SIO_000300: 1.756e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

QD
type: SiteQuality
SIO_000300: 1.558e1

DP
type: SiteQuality
SIO_000300: 2.203544e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
all individuals: 804
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5074
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20955
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

DP
type: SiteQuality
SIO_000300: 2.211912e6

VQSLOD
type: SiteQuality
SIO_000300: -1.605e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.248e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.842e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 7702
bin: 6.25e1
variant carriers: 88

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 320
bin: 3.75e1
variant carriers: 40

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3683
bin: 7.75e1
variant carriers: 127

GenotypeQuality
all individuals: 2903
bin: 9.25e1
variant carriers: 166

GenotypeQuality
all individuals: 2004
bin: 8.75e1
variant carriers: 89

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 41

GenotypeQuality
all individuals: 3355
bin: 8.25e1
variant carriers: 139

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 10

Latino
type: Population
allele count: 2752
allele frequency: 2.387645323616172e-1
allele num: 11526
num of homozygotes: 336

South Asian
type: Population
allele count: 6282
allele frequency: 3.860145016590881e-1
allele num: 16274
num of homozygotes: 1257

Other
type: Population
allele count: 166
allele frequency: 1.848552338530067e-1
allele num: 898
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 1305
allele frequency: 1.978471801091571e-1
allele num: 6596
num of homozygotes: 134

European (Non-Finnish)
type: Population
allele count: 7806
allele frequency: 1.176381939839653e-1
allele num: 66356
num of homozygotes: 488

East Asian
type: Population
allele count: 2504
allele frequency: 2.908246225319396e-1
allele num: 8610
num of homozygotes: 361

African
type: Population
allele count: 1237
allele frequency: 1.1907970735464e-1
allele num: 10388
num of homozygotes: 78

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.06e-2

DP
type: SiteQuality
SIO_000300: 2.461919e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 1.665e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3683
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3355
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507022725902707e-5
allele num: 66356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.665e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.06e-2

DP
type: SiteQuality
SIO_000300: 2.461919e6

VQSLOD
type: SiteQuality
SIO_000300: 7.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4698
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

DP
type: SiteQuality
SIO_000300: 2.398711e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 5.483e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e0

GenotypeQuality
all individuals: 10756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25047
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.015218502812114e-5
allele num: 66498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

DP
type: SiteQuality
SIO_000300: 2.400437e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.341e1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0