X-24197452-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197452
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197452
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.211G>A
  hgvsp: ENSP00000368475.1:p.Val71Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.328G>A
  hgvsp: ENSP00000441382.1:p.Val110Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.211G>A
  hgvsp: ENSP00000368486.3:p.Val71Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.211G>A
  hgvsp: ENSP00000411637.1:p.Val71Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.211G>A
  hgvsp: ENSP00000304985.5:p.Val71Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27991G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.211G>A
  hgvsp: ENSP00000343384.3:p.Val71Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.436G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27991G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22279
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val71Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

X-24197483-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197483
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197483
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.242T>C
  hgvsp: ENSP00000343384.3:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.242T>C
  hgvsp: ENSP00000411637.1:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.359T>C
  hgvsp: ENSP00000441382.1:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.242T>C
  hgvsp: ENSP00000304985.5:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.242T>C
  hgvsp: ENSP00000368475.1:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27960T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.467T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27960T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.242T>C
  hgvsp: ENSP00000368486.3:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19263
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile81Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-24197488-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197488
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197488
    reference: chr 0
allele count: 15
allele frequency: 1.709167977028782e-4
allele num: 87762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.247G>C
  hgvsp: ENSP00000343384.3:p.Glu83Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.247G>C
  hgvsp: ENSP00000368486.3:p.Glu83Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.364G>C
  hgvsp: ENSP00000441382.1:p.Glu122Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.247G>C
  hgvsp: ENSP00000304985.5:p.Glu83Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27955G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.247G>C
  hgvsp: ENSP00000411637.1:p.Glu83Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27955G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.247G>C
  hgvsp: ENSP00000368475.1:p.Glu83Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.472G>C
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu83Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

X-24197502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197502
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197502
    reference: chr 0
allele count: 1
allele frequency: 1.13947128532361e-5
allele num: 87760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.261G>A
  hgvsp: ENST00000304543.5:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.261G>A
  hgvsp: ENST00000338565.3:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.378G>A
  hgvsp: ENST00000540034.1:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27941G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.261G>A
  hgvsp: ENST00000379188.3:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.486G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.261G>A
  hgvsp: ENST00000379177.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27941G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.261G>A
  hgvsp: ENST00000428571.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5795
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val87Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

X-24197504-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197504
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197504
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.263C>G
  hgvsp: ENSP00000368486.3:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27939C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.263C>G
  hgvsp: ENSP00000368475.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27939C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.263C>G
  hgvsp: ENSP00000343384.3:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.380C>G
  hgvsp: ENSP00000441382.1:p.Ser127Cys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.263C>G
  hgvsp: ENSP00000304985.5:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.488C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.263C>G
  hgvsp: ENSP00000411637.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5794
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser88Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

X-24197511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197511
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197511
    reference: chr 0
allele count: 1
allele frequency: 1.13947128532361e-5
allele num: 87760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.270G>A
  hgvsp: ENST00000379188.3:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.270G>A
  hgvsp: ENST00000338565.3:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.387G>A
  hgvsp: ENST00000540034.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27932G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.270G>A
  hgvsp: ENST00000379177.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.270G>A
  hgvsp: ENST00000428571.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27932G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.270G>A
  hgvsp: ENST00000304543.5:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.495G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr90Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

X-24197527-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197527
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197527
    reference: chr 0
allele count: 2
allele frequency: 2.278916603046912e-5
allele num: 87761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.403C>G
  hgvsp: ENSP00000441382.1:p.Gln135Glu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.286C>G
  hgvsp: ENSP00000368486.3:p.Gln96Glu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27916C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.511C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.286C>G
  hgvsp: ENSP00000411637.1:p.Gln96Glu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.286C>G
  hgvsp: ENSP00000368475.1:p.Gln96Glu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27916C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.286C>G
  hgvsp: ENSP00000343384.3:p.Gln96Glu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.286C>G
  hgvsp: ENSP00000304985.5:p.Gln96Glu
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln96Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

X-24197538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197538
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197538
    reference: chr 0
allele count: 10
allele frequency: 1.139445318019188e-4
allele num: 87762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.297C>T
  hgvsp: ENST00000379188.3:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.522C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.297C>T
  hgvsp: ENST00000338565.3:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.297C>T
  hgvsp: ENST00000428571.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.297C>T
  hgvsp: ENST00000304543.5:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27905C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.414C>T
  hgvsp: ENST00000540034.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.297C>T
  hgvsp: ENST00000379177.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27905C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp99Asp
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

X-24197541-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197541
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197541
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27902A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.300A>G
  hgvsp: ENST00000338565.3:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.300A>G
  hgvsp: ENST00000379177.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27902A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.300A>G
  hgvsp: ENST00000428571.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.417A>G
  hgvsp: ENST00000540034.1:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.300A>G
  hgvsp: ENST00000379188.3:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.300A>G
  hgvsp: ENST00000304543.5:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.525A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser100Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-24197564-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197564
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197564
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.323T>C
  hgvsp: ENSP00000368475.1:p.Leu108Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.323T>C
  hgvsp: ENSP00000411637.1:p.Leu108Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.323T>C
  hgvsp: ENSP00000343384.3:p.Leu108Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.440T>C
  hgvsp: ENSP00000441382.1:p.Leu147Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27879T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.548T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.323T>C
  hgvsp: ENSP00000368486.3:p.Leu108Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27879T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.323T>C
  hgvsp: ENSP00000304985.5:p.Leu108Ser
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu108Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

X-24197568-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197568
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197568
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.327A>G
  hgvsp: ENST00000304543.5:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.444A>G
  hgvsp: ENST00000540034.1:c.444A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.327A>G
  hgvsp: ENST00000379188.3:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.552A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.327A>G
  hgvsp: ENST00000338565.3:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.327A>G
  hgvsp: ENST00000379177.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27875A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27875A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.327A>G
  hgvsp: ENST00000428571.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala109Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

X-24197570-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197570
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197570
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.329A>G
  hgvsp: ENSP00000368475.1:p.His110Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.329A>G
  hgvsp: ENSP00000343384.3:p.His110Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.329A>G
  hgvsp: ENSP00000304985.5:p.His110Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27873A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.446A>G
  hgvsp: ENSP00000441382.1:p.His149Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.329A>G
  hgvsp: ENSP00000368486.3:p.His110Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.554A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.329A>G
  hgvsp: ENSP00000411637.1:p.His110Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27873A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22274
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His110Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

X-24197577-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197577
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197577
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.453A>C
  hgvsp: ENST00000540034.1:c.453A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.336A>C
  hgvsp: ENST00000379188.3:c.336A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.561A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.336A>C
  hgvsp: ENST00000304543.5:c.336A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27866A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.336A>C
  hgvsp: ENST00000379177.1:c.336A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.336A>C
  hgvsp: ENST00000428571.1:c.336A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.336A>C
  hgvsp: ENST00000338565.3:c.336A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27866A>C
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr112Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

X-24197586-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197586
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197586
    reference: chr 0
allele count: 2
allele frequency: 2.278812738563208e-5
allele num: 87765
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27857T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.462T>C
  hgvsp: ENST00000540034.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.345T>C
  hgvsp: ENST00000428571.1:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.345T>C
  hgvsp: ENST00000379177.1:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.345T>C
  hgvsp: ENST00000338565.3:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27857T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.345T>C
  hgvsp: ENST00000379188.3:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.570T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.345T>C
  hgvsp: ENST00000304543.5:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp115Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-24197602-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197602
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197602
    reference: chr 0
allele count: 2
allele frequency: 2.278812738563208e-5
allele num: 87765
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.361G>C
  hgvsp: ENSP00000304985.5:p.Asp121His
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27841G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.361G>C
  hgvsp: ENSP00000411637.1:p.Asp121His
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.361G>C
  hgvsp: ENSP00000368486.3:p.Asp121His
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.478G>C
  hgvsp: ENSP00000441382.1:p.Asp160His
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.361G>C
  hgvsp: ENSP00000343384.3:p.Asp121His
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.586G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27841G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.361G>C
  hgvsp: ENSP00000368475.1:p.Asp121His
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5815
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp121His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

X-24197603-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197603
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197603
    reference: chr 0
allele count: 1
allele frequency: 1.139406369281604e-5
allele num: 87765
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.362A>C
  hgvsp: ENSP00000411637.1:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.362A>C
  hgvsp: ENSP00000368486.3:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.587A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.362A>C
  hgvsp: ENSP00000304985.5:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27840A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.362A>C
  hgvsp: ENSP00000368475.1:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.362A>C
  hgvsp: ENSP00000343384.3:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27840A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.479A>C
  hgvsp: ENSP00000441382.1:p.Asp160Ala
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp121Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-24197612-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197612
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197612
    reference: chr 0
allele count: 1
allele frequency: 1.139380404935796e-5
allele num: 87767
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.371C>T
  hgvsp: ENSP00000304985.5:p.Ser124Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.488C>T
  hgvsp: ENSP00000441382.1:p.Ser163Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.371C>T
  hgvsp: ENSP00000368486.3:p.Ser124Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27831C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.371C>T
  hgvsp: ENSP00000368475.1:p.Ser124Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.371C>T
  hgvsp: ENSP00000343384.3:p.Ser124Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.596C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.371C>T
  hgvsp: ENSP00000411637.1:p.Ser124Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27831C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22271
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19318
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3022
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser124Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

X-24197627-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197627
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197627
    reference: chr 0
allele count: 1
allele frequency: 1.139367423206636e-5
allele num: 87768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.386T>C
  hgvsp: ENSP00000411637.1:p.Met129Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.386T>C
  hgvsp: ENSP00000368486.3:p.Met129Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.503T>C
  hgvsp: ENSP00000441382.1:p.Met168Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.386T>C
  hgvsp: ENSP00000368475.1:p.Met129Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.386T>C
  hgvsp: ENSP00000343384.3:p.Met129Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27816T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.611T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27816T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.386T>C
  hgvsp: ENSP00000304985.5:p.Met129Thr
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3022
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5819
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met129Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ

X-24197629-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197629
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197629
    reference: chr 0
allele count: 1
allele frequency: 1.139367423206636e-5
allele num: 87768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27814C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.388C>G
  hgvsp: ENSP00000368486.3:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27814C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.388C>G
  hgvsp: ENSP00000411637.1:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.505C>G
  hgvsp: ENSP00000441382.1:p.Pro169Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.388C>G
  hgvsp: ENSP00000368475.1:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.613C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.388C>G
  hgvsp: ENSP00000343384.3:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.388C>G
  hgvsp: ENSP00000304985.5:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3579
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro130Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

X-24197631-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197631
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197631
    reference: chr 0
allele count: 15
allele frequency: 1.709051134809954e-4
allele num: 87768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.390A>C
  hgvsp: ENST00000428571.1:c.390A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.390A>C
  hgvsp: ENST00000304543.5:c.390A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27812A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.390A>C
  hgvsp: ENST00000379188.3:c.390A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.390A>C
  hgvsp: ENST00000338565.3:c.390A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.615A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.507A>C
  hgvsp: ENST00000540034.1:c.507A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.390A>C
  hgvsp: ENST00000379177.1:c.390A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27812A>C
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5822
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro130Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

X-24197632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197632
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197632
    reference: chr 0
allele count: 1
allele frequency: 1.139367423206636e-5
allele num: 87768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.508G>A
  hgvsp: ENSP00000441382.1:p.Glu170Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.391G>A
  hgvsp: ENSP00000368486.3:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27811G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27811G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.391G>A
  hgvsp: ENSP00000343384.3:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.391G>A
  hgvsp: ENSP00000411637.1:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.391G>A
  hgvsp: ENSP00000368475.1:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.391G>A
  hgvsp: ENSP00000304985.5:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.616G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19308
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu131Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

X-24197644-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197644
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197644
    reference: chr 0
allele count: 10
allele frequency: 1.139367423206636e-4
allele num: 87768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.628A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27799A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.403A>G
  hgvsp: ENSP00000411637.1:p.Thr135Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.403A>G
  hgvsp: ENSP00000343384.3:p.Thr135Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.403A>G
  hgvsp: ENSP00000368475.1:p.Thr135Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.520A>G
  hgvsp: ENSP00000441382.1:p.Thr174Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.403A>G
  hgvsp: ENSP00000368486.3:p.Thr135Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27799A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.403A>G
  hgvsp: ENSP00000304985.5:p.Thr135Ala
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr135Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

X-24197645-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197645
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197645
    reference: chr 0
allele count: 12
allele frequency: 1.367240907847963e-4
allele num: 87768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27798C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.404C>T
  hgvsp: ENSP00000368475.1:p.Thr135Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.404C>T
  hgvsp: ENSP00000304985.5:p.Thr135Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.521C>T
  hgvsp: ENSP00000441382.1:p.Thr174Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.404C>T
  hgvsp: ENSP00000343384.3:p.Thr135Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.404C>T
  hgvsp: ENSP00000411637.1:p.Thr135Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27798C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.404C>T
  hgvsp: ENSP00000368486.3:p.Thr135Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.629C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Thr135Met
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

X-24197646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197646
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197646
    reference: chr 0
allele count: 2
allele frequency: 2.278734846413271e-5
allele num: 87768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.630G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27797G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.405G>A
  hgvsp: ENST00000379177.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.405G>A
  hgvsp: ENST00000379188.3:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27797G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.522G>A
  hgvsp: ENST00000540034.1:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.405G>A
  hgvsp: ENST00000338565.3:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.405G>A
  hgvsp: ENST00000304543.5:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000411637
  ensembl transcript: ENST00000428571
  gene symbol: ZFX
  hgvsc: ENST00000428571.1:c.405G>A
  hgvsp: ENST00000428571.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr135Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

X-24197650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197650
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197650
    reference: chr 0
allele count: 94
allele frequency: 1.071005377814237e-3
allele num: 87768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27793G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.409G>A
  hgvsp: ENSP00000368475.1:p.Asp137Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.409G>A
  hgvsp: ENSP00000343384.3:p.Asp137Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.409G>A
  hgvsp: ENSP00000368486.3:p.Asp137Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.409G>A
  hgvsp: ENSP00000304985.5:p.Asp137Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.526G>A
  hgvsp: ENSP00000441382.1:p.Asp176Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.634G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27793G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 9.75e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp137Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

X-24197656-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197656
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197656
    reference: chr 0
allele count: 1
allele frequency: 1.139406369281604e-5
allele num: 87765
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.415A>G
  hgvsp: ENSP00000343384.3:p.Ile139Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.415A>G
  hgvsp: ENSP00000368475.1:p.Ile139Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.532A>G
  hgvsp: ENSP00000441382.1:p.Ile178Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.415A>G
  hgvsp: ENSP00000368486.3:p.Ile139Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.415A>G
  hgvsp: ENSP00000304985.5:p.Ile139Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.640A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27787A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27787A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile139Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

X-24197660-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197660
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197660
    reference: chr 0
allele count: 3
allele frequency: 3.418102269619907e-5
allele num: 87768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.536A>T
  hgvsp: ENSP00000441382.1:p.His179Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.419A>T
  hgvsp: ENSP00000343384.3:p.His140Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27783A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.419A>T
  hgvsp: ENSP00000368486.3:p.His140Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27783A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.419A>T
  hgvsp: ENSP00000368475.1:p.His140Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.419A>T
  hgvsp: ENSP00000304985.5:p.His140Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000474385
  gene symbol: ZFX
  hgvsc: ENST00000474385.1:n.644A>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His140Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

X-24197670-C-CGTTGGACAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197670
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197679
    reference: chr 0
allele count: 40
allele frequency: 4.557729339243189e-4
allele num: 87763
alternate allele: CGTTGGACAT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.569_577dupGACATGTTG
  hgvsp: ENSP00000441382.1:p.Gly190_Val192dup
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.452_460dupGACATGTTG
  hgvsp: ENSP00000368486.3:p.Gly151_Val153dup
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.452_460dupGACATGTTG
  hgvsp: ENSP00000304985.5:p.Gly151_Val153dup
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.452_460dupGACATGTTG
  hgvsp: ENSP00000368475.1:p.Gly151_Val153dup
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.452_460dupGACATGTTG
  hgvsp: ENSP00000343384.3:p.Gly151_Val153dup
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly151_Val153dup
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

X-24197670-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197670
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197670
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.546C>T
  hgvsp: ENST00000540034.1:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.429C>T
  hgvsp: ENST00000379177.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.429C>T
  hgvsp: ENST00000304543.5:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.429C>T
  hgvsp: ENST00000338565.3:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.429C>T
  hgvsp: ENST00000379188.3:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27773C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27773C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp143Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

X-24197670-CGTTGGACAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197670
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197661
    reference: chr 0
allele count: 47
allele frequency: 5.355331973610747e-4
allele num: 87763
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.452_460delGACATGTTG
  hgvsp: ENSP00000304985.5:p.Gly151_Val153del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.452_460delGACATGTTG
  hgvsp: ENSP00000343384.3:p.Gly151_Val153del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.452_460delGACATGTTG
  hgvsp: ENSP00000368486.3:p.Gly151_Val153del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.452_460delGACATGTTG
  hgvsp: ENSP00000368475.1:p.Gly151_Val153del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.569_577delGACATGTTG
  hgvsp: ENSP00000441382.1:p.Gly190_Val192del
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly151_Val153del
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: CGTTGGACAT
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-24197671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197671
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197671
    reference: chr 0
allele count: 1
allele frequency: 1.141526449167827e-5
allele num: 87602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27772G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.430G>A
  hgvsp: ENSP00000368486.3:p.Val144Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.430G>A
  hgvsp: ENSP00000304985.5:p.Val144Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.430G>A
  hgvsp: ENSP00000343384.3:p.Val144Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27772G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.547G>A
  hgvsp: ENSP00000441382.1:p.Val183Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.430G>A
  hgvsp: ENSP00000368475.1:p.Val144Ile
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22208
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val144Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

X-24197675-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197675
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197675
    reference: chr 0
allele count: 1
allele frequency: 1.140133851714191e-5
allele num: 87709
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.434G>T
  hgvsp: ENSP00000343384.3:p.Gly145Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27768G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.434G>T
  hgvsp: ENSP00000304985.5:p.Gly145Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27768G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.434G>T
  hgvsp: ENSP00000368486.3:p.Gly145Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.434G>T
  hgvsp: ENSP00000368475.1:p.Gly145Val
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.551G>T
  hgvsp: ENSP00000441382.1:p.Gly184Val
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5688
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly145Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

X-24197681-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197681
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197681
    reference: chr 0
allele count: 2
allele frequency: 2.278864669621595e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27762T>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.440T>G
  hgvsp: ENSP00000368475.1:p.Val147Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27762T>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.440T>G
  hgvsp: ENSP00000304985.5:p.Val147Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.557T>G
  hgvsp: ENSP00000441382.1:p.Val186Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.440T>G
  hgvsp: ENSP00000343384.3:p.Val147Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.440T>G
  hgvsp: ENSP00000368486.3:p.Val147Gly
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val147Gly
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

X-24197687-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197687
    reference: chr 0
allele count: 1
allele frequency: 1.13947128532361e-5
allele num: 87760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.446A>G
  hgvsp: ENSP00000304985.5:p.His149Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27756A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.563A>G
  hgvsp: ENSP00000441382.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.446A>G
  hgvsp: ENSP00000368486.3:p.His149Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27756A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.446A>G
  hgvsp: ENSP00000368475.1:p.His149Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.446A>G
  hgvsp: ENSP00000343384.3:p.His149Arg
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 68
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2990
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His149Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

X-24197696-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197696
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197696
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27747A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.455A>G
  hgvsp: ENSP00000368475.1:p.His152Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.455A>G
  hgvsp: ENSP00000343384.3:p.His152Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.455A>G
  hgvsp: ENSP00000368486.3:p.His152Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.572A>G
  hgvsp: ENSP00000441382.1:p.His191Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.455A>G
  hgvsp: ENSP00000304985.5:p.His152Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27747A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1798
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
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genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22263
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2991
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His152Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

X-24197700-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197700
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197700
    reference: chr 0
allele count: 4
allele frequency: 4.557833206093823e-5
allele num: 87761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.576T>G
  hgvsp: ENST00000540034.1:c.576T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.459T>G
  hgvsp: ENST00000379177.1:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.459T>G
  hgvsp: ENST00000379188.3:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.459T>G
  hgvsp: ENST00000338565.3:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27743T>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.459T>G
  hgvsp: ENST00000304543.5:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27743T>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2648
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genotype depth: GenotypeDepth
  all individuals: 1597
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genotype quality: GenotypeQuality
  all individuals: 39
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Val153Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

X-24197701-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197701
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197701
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27742G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.460G>C
  hgvsp: ENSP00000368486.3:p.Glu154Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27742G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.460G>C
  hgvsp: ENSP00000304985.5:p.Glu154Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.577G>C
  hgvsp: ENSP00000441382.1:p.Glu193Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.460G>C
  hgvsp: ENSP00000368475.1:p.Glu154Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.460G>C
  hgvsp: ENSP00000343384.3:p.Glu154Gln
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22264
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu154Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

X-24197706-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197706
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197706
    reference: chr 0
allele count: 149
allele frequency: 1.697792869269949e-3
allele num: 87761
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27737T>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.582T>A
  hgvsp: ENSP00000441382.1:p.His194Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.465T>A
  hgvsp: ENSP00000368475.1:p.His155Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.465T>A
  hgvsp: ENSP00000304985.5:p.His155Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27737T>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.465T>A
  hgvsp: ENSP00000368486.3:p.His155Gln
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.465T>A
  hgvsp: ENSP00000343384.3:p.His155Gln
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9260
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 882
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genotype depth: GenotypeDepth
  all individuals: 1875
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  variant carriers: 92
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 576
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genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
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genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His155Gln
num of homozygotes: 1
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-24197714-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197714
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197714
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.473A>G
  hgvsp: ENSP00000343384.3:p.His158Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27729A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.473A>G
  hgvsp: ENSP00000368486.3:p.His158Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.590A>G
  hgvsp: ENSP00000441382.1:p.His197Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.473A>G
  hgvsp: ENSP00000304985.5:p.His158Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.473A>G
  hgvsp: ENSP00000368475.1:p.His158Arg
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27729A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9278
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5704
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His158Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-24197720-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197720
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197720
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27723G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.479G>C
  hgvsp: ENSP00000304985.5:p.Ser160Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.479G>C
  hgvsp: ENSP00000368475.1:p.Ser160Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.479G>C
  hgvsp: ENSP00000368486.3:p.Ser160Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27723G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.596G>C
  hgvsp: ENSP00000441382.1:p.Ser199Thr
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.479G>C
  hgvsp: ENSP00000343384.3:p.Ser160Thr
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9275
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser160Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

X-24197723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197723
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197723
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.482T>C
  hgvsp: ENSP00000368475.1:p.Val161Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.482T>C
  hgvsp: ENSP00000343384.3:p.Val161Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27720T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27720T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.599T>C
  hgvsp: ENSP00000441382.1:p.Val200Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.482T>C
  hgvsp: ENSP00000368486.3:p.Val161Ala
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.482T>C
  hgvsp: ENSP00000304985.5:p.Val161Ala
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val161Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

X-24197739-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197739
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.498T>G
  hgvsp: ENSP00000368486.3:p.Ile166Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27704T>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.498T>G
  hgvsp: ENSP00000368475.1:p.Ile166Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.498T>G
  hgvsp: ENSP00000304985.5:p.Ile166Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.498T>G
  hgvsp: ENSP00000343384.3:p.Ile166Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.615T>G
  hgvsp: ENSP00000441382.1:p.Ile205Met
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27704T>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
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genotype depth: GenotypeDepth
  all individuals: 2939
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12277
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile166Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

X-24197742-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197742
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197742
    reference: chr 0
allele count: 2
allele frequency: 2.278916603046912e-5
allele num: 87761
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27701C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.501C>T
  hgvsp: ENST00000379188.3:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.501C>T
  hgvsp: ENST00000304543.5:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.618C>T
  hgvsp: ENST00000540034.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.501C>T
  hgvsp: ENST00000338565.3:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.501C>T
  hgvsp: ENST00000379177.1:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27701C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12276
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val167Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

X-24197745-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197745
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197745
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.504T>C
  hgvsp: ENST00000379177.1:c.504T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27698T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.621T>C
  hgvsp: ENST00000540034.1:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.504T>C
  hgvsp: ENST00000338565.3:c.504T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.504T>C
  hgvsp: ENST00000304543.5:c.504T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27698T>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.504T>C
  hgvsp: ENST00000379188.3:c.504T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5722
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr168Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

X-24197764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197764
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197764
    reference: chr 0
allele count: 1
allele frequency: 1.13954919433872e-5
allele num: 87754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27679G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.523G>A
  hgvsp: ENSP00000368475.1:p.Val175Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.523G>A
  hgvsp: ENSP00000368486.3:p.Val175Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.523G>A
  hgvsp: ENSP00000304985.5:p.Val175Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.523G>A
  hgvsp: ENSP00000343384.3:p.Val175Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.640G>A
  hgvsp: ENSP00000441382.1:p.Val214Ile
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27679G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val175Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

X-24197768-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197768
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197768
    reference: chr 0
allele count: 1
allele frequency: 1.139562180210363e-5
allele num: 87753
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.527T>G
  hgvsp: ENSP00000343384.3:p.Val176Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.527T>G
  hgvsp: ENSP00000304985.5:p.Val176Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.644T>G
  hgvsp: ENSP00000441382.1:p.Val215Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.527T>G
  hgvsp: ENSP00000368486.3:p.Val176Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27675T>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.527T>G
  hgvsp: ENSP00000368475.1:p.Val176Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27675T>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22235
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val176Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

X-24197771-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197771
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197768
    reference: chr 0
allele count: 2
allele frequency: 2.279202279202279e-5
allele num: 87750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.536_538delAAG
  hgvsp: ENSP00000343384.3:p.Glu179del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.536_538delAAG
  hgvsp: ENSP00000368475.1:p.Glu179del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.536_538delAAG
  hgvsp: ENSP00000368486.3:p.Glu179del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.536_538delAAG
  hgvsp: ENSP00000304985.5:p.Glu179del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.653_655delAAG
  hgvsp: ENSP00000441382.1:p.Glu218del
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27666_-41-27664delAAG
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27666_278-27664delAAG
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu179del
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: CAGA
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

X-24197816-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197816
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197816
    reference: chr 0
allele count: 1
allele frequency: 1.143589039842642e-5
allele num: 87444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.575A>G
  hgvsp: ENSP00000304985.5:p.Asp192Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.575A>G
  hgvsp: ENSP00000343384.3:p.Asp192Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.575A>G
  hgvsp: ENSP00000368475.1:p.Asp192Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27627A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.575A>G
  hgvsp: ENSP00000368486.3:p.Asp192Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.692A>G
  hgvsp: ENSP00000441382.1:p.Asp231Gly
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27627A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19047
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp192Gly
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

X-24197822-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197822
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197822
    reference: chr 0
allele count: 93
allele frequency: 1.065328705453796e-3
allele num: 87297
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.581A>G
  hgvsp: ENSP00000368486.3:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27621A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.581A>G
  hgvsp: ENSP00000304985.5:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.581A>G
  hgvsp: ENSP00000343384.3:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27621A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.698A>G
  hgvsp: ENSP00000441382.1:p.Asn233Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.581A>G
  hgvsp: ENSP00000368475.1:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 9.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Asn194Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

X-24197851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197851
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197851
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 86031
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.610G>A
  hgvsp: ENSP00000368486.3:p.Asp204Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.610G>A
  hgvsp: ENSP00000304985.5:p.Asp204Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.727G>A
  hgvsp: ENSP00000441382.1:p.Asp243Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.610G>A
  hgvsp: ENSP00000368475.1:p.Asp204Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27592G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.610G>A
  hgvsp: ENSP00000343384.3:p.Asp204Asn
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27592G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2976
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22222
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp204Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-24197853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197853
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197853
    reference: chr 0
allele count: 1
allele frequency: 1.164212119448164e-5
allele num: 85895
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27590C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.612C>T
  hgvsp: ENST00000379188.3:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.612C>T
  hgvsp: ENST00000304543.5:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.729C>T
  hgvsp: ENST00000540034.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.612C>T
  hgvsp: ENST00000379177.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27590C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.612C>T
  hgvsp: ENST00000338565.3:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22223
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp204Asp
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

X-24197861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197861
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197861
    reference: chr 0
allele count: 1
allele frequency: 1.173584949946602e-5
allele num: 85209
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27582A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.737A>G
  hgvsp: ENSP00000441382.1:p.Asn246Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27582A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.620A>G
  hgvsp: ENSP00000368475.1:p.Asn207Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.620A>G
  hgvsp: ENSP00000368486.3:p.Asn207Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.620A>G
  hgvsp: ENSP00000304985.5:p.Asn207Ser
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.620A>G
  hgvsp: ENSP00000343384.3:p.Asn207Ser
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn207Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

X-24197881-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197881
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197881
    reference: chr 0
allele count: 1
allele frequency: 1.195771751088152e-5
allele num: 83628
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.640A>C
  hgvsp: ENSP00000368475.1:p.Ile214Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27562A>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.757A>C
  hgvsp: ENSP00000441382.1:p.Ile253Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.640A>C
  hgvsp: ENSP00000343384.3:p.Ile214Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.640A>C
  hgvsp: ENSP00000368486.3:p.Ile214Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.640A>C
  hgvsp: ENSP00000304985.5:p.Ile214Leu
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27562A>C
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4221
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22221
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4280
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile214Leu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

X-24197894-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197894
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197894
    reference: chr 0
allele count: 4
allele frequency: 4.845900368288428e-5
allele num: 82544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+7C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27549C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+7C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27549C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+7C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+7C>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+7C>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 9.75e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 570
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 22220
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  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.5e0
  variant carriers: 0
hgvs: c.646+7C>G
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-24197898-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197898
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197898
    reference: chr 0
allele count: 1
allele frequency: 1.216722635907918e-5
allele num: 82188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+11G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+11G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+11G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+11G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27545G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+11G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27545G>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2953
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

X-24197900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197900
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197900
    reference: chr 0
allele count: 3
allele frequency: 3.65724317009838e-5
allele num: 82029
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27543G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+13G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+13G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+13G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27543G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+13G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+13G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2642
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

X-24197908-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197908
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197908
    reference: chr 0
allele count: 1
allele frequency: 1.22832014936373e-5
allele num: 81412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+21A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+21A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+21A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27535A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27535A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+21A>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+21A>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 2323
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

X-24197918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197918
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197918
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 80661
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+31G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+31G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+31G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27525G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+31G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+31G>A
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27525G>A
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

X-24197926-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197926
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197926
    reference: chr 0
allele count: 2
allele frequency: 2.50075022506752e-5
allele num: 79976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27517G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+39G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+39G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27517G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+39G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+39G>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+39G>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

X-24197928-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197928
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197928
    reference: chr 0
allele count: 3
allele frequency: 3.76015241151108e-5
allele num: 79784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+41A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27515A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27515A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+41A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+41A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+41A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+41A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2393
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genotype quality: GenotypeQuality
  all individuals: 745
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

X-24197929-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197929
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197929
    reference: chr 0
allele count: 1
allele frequency: 1.255461256465626e-5
allele num: 79652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+42G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+42G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+42G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
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  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27514G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27514G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+42G>C
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+42G>C
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

X-24197937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024197937
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024197937
    reference: chr 0
allele count: 2
allele frequency: 2.53434031121699e-5
allele num: 78916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.646+50C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.646+50C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.646+50C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
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  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-27506C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-27506C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
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  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.646+50C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.763+50C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 740
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

X-24225242-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225242
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225242
    reference: chr 0
allele count: 4
allele frequency: 3.700277520814061e-3
allele num: 1081
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-201C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-201C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-587C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-201C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-201C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-201C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-201C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

X-24225242-CGGGAGGCTGAGGCAGGAGAATGGCTTGAACCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225242
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225210
    reference: chr 0
allele count: 1
allele frequency: 9.250693802035153e-4
allele num: 1081
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 105
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: CGGGAGGCTGAGGCAGGAGAATGGCTTGAACCT
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

X-24225291-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225291
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225291
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 1449
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
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  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-152A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-538A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

X-24225308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225308
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225308
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 2037
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-135C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-135C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-135C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-135C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-521C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-135C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-135C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 82
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 188
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

X-24225310-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225310
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225310
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 2196
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-133C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-133C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-133C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
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  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-133C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
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  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-133C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
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  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-519C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-133C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-24225314-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225314
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225314
    reference: chr 0
allele count: 4
allele frequency: 1.493094438223218e-3
allele num: 2679
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-129A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-129A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-129A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-129A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
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  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-515A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-129A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-129A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 8543
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

X-24225319-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225319
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225319
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 3046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-124A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-510A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 33213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11443
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9603
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

X-24225322-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225322
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225322
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 3223
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-507C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-121C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-121C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-121C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-121C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-121C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-121C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

X-24225342-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225342
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225342
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 6417
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl transcript: ENST00000459724
  gene symbol: ZFX
  hgvsc: ENST00000459724.1:n.278-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-101A>G
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000343384
  ensembl transcript: ENST00000338565
  gene symbol: ZFX
  hgvsc: ENST00000338565.3:c.647-487A>G
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19894
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

X-24225343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24024225343
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24024225343
    reference: chr 0
allele count: 72
allele frequency: 1.066666666666667e-2
allele num: 6750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000441382
  ensembl transcript: ENST00000540034
  gene symbol: ZFX
  hgvsc: ENST00000540034.1:c.764-100C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368486
  ensembl transcript: ENST00000379188
  gene symbol: ZFX
  hgvsc: ENST00000379188.3:c.647-100C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000368475
  ensembl transcript: ENST00000379177
  gene symbol: ZFX
  hgvsc: ENST00000379177.1:c.647-100C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000304985
  ensembl transcript: ENST00000304543
  gene symbol: ZFX
  hgvsc: ENST00000304543.5:c.647-100C>T
  variant of: http://identifiers.org/hgnc/12869
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005889
  ensembl protein: ENSP00000438233
  ensembl transcript: ENST00000539115
  gene symbol: ZFX
  hgvsc: ENST00000539115.1:c.-41-100C>T
  variant of: http://identifiers.org/hgnc/12869
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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South Asian
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African
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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Other
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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European (Non-Finnish)
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African
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South Asian
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
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BaseQRankSum
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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South Asian
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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VQSLOD
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FS
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QD
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10122
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
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East Asian
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allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47996
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South Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 47996
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 633
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47996
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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QD
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FS
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 6638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.083506958913243e-5
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South Asian
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African
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Other
type: Population
allele count: 0
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MQ
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SIO_000300: 5.955e1

ClippingRankSum
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.34796900680911e-4
allele num: 8518
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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Other
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South Asian
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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African
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South Asian
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East Asian
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Latino
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DP
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FS
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QD
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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QD
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FS
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 4530
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East Asian
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Latino
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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allele frequency: 1.608751608751609e-3
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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Other
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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European (Finnish)
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African
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Other
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FS
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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East Asian
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South Asian
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African
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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South Asian
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Other
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East Asian
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BaseQRankSum
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MQ
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FS
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VQSLOD
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
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SIO_000300: -5.243e0

DP
type: SiteQuality
SIO_000300: 2.628207e6

QD
type: SiteQuality
SIO_000300: 1.892e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47998
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQRankSum
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BaseQRankSum
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SIO_000300: 8.56e0

VQSLOD
type: SiteQuality
SIO_000300: -1.566e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.431e1

DP
type: SiteQuality
SIO_000300: 2.612526e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 6.25e-5
allele num: 48000
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.765e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

QD
type: SiteQuality
SIO_000300: 2.14e1

FS
type: SiteQuality
SIO_000300: 3.221e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

DP
type: SiteQuality
SIO_000300: 2.613544e6

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeQuality
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variant carriers: 40

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 33
allele frequency: 6.875286470269594e-4
allele num: 47998
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 6.435696664163896e-4
allele num: 9323
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

DP
type: SiteQuality
SIO_000300: 2.616917e6

MQRankSum
type: SiteQuality
SIO_000300: -4.138e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.682e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQ
type: SiteQuality
SIO_000300: 5.56e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 7.28e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.072616110693983e-4
allele num: 9323
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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DP
type: SiteQuality
SIO_000300: 2.616917e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.28e0

MQRankSum
type: SiteQuality
SIO_000300: -4.138e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.682e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 5.56e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 11
allele frequency: 1.29138295374501e-3
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.958421211208195e-3
allele num: 6638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.951397806974217e-4
allele num: 10123
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.179877721763381e-3
allele num: 9323
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.66673611400475e-4
allele num: 47998
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.138e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.56e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.682e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9291
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47918
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East Asian
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allele count: 0
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0318e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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MQ
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SIO_000300: 5.981e1

ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 2.624259e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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allele num: 9309
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African
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.08389772229979e-5
allele num: 47987
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.975308641975309e-4
allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47995
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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European (Finnish)
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South Asian
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
type: SiteQuality
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FS
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e0

DP
type: SiteQuality
SIO_000300: 2.611765e6

VQSLOD
type: SiteQuality
SIO_000300: -1.176e0

MQRankSum
type: SiteQuality
SIO_000300: -1.473e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 6.03e-1

QD
type: SiteQuality
SIO_000300: 1.755e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47994
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 4.29000429000429e-4
allele num: 9324
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.74e-1

FS
type: SiteQuality
SIO_000300: 1.994e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.51e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: -5.763e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

QD
type: SiteQuality
SIO_000300: 2.218e1

DP
type: SiteQuality
SIO_000300: 2.612043e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.526e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 2.611795e6

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

FS
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.142e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.487e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 145

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

South Asian
type: Population
allele count: 89
allele frequency: 8.790991702884235e-3
allele num: 10124
num of homozygotes: 1

Latino
type: Population
allele count: 5
allele frequency: 5.362505362505362e-4
allele num: 9324
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 51
allele frequency: 1.062632829103638e-3
allele num: 47994
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.15955766192733e-3
allele num: 633
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 2.622192e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.526e1

QD
type: SiteQuality
SIO_000300: 2.189e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.989e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47994
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.079e1

FS
type: SiteQuality
SIO_000300: 2.935e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 2.60986e6

VQSLOD
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 22234
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.876543209876543e-5
allele num: 10125
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.18e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 2.971e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083637197091242e-5
allele num: 47993
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e1

MQRankSum
type: SiteQuality
SIO_000300: -1.572e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.832e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 2.61013e6

VQSLOD
type: SiteQuality
SIO_000300: -2.234e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.876543209876543e-5
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47993
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.042e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

DP
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10125
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.167274394182485e-5
allele num: 47993
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 633
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
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African
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allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
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QD
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SIO_000300: 3.228e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.88e-1

DP
type: SiteQuality
SIO_000300: 2.610196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083941149501938e-5
allele num: 47986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.685e0

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 3.012e0

DP
type: SiteQuality
SIO_000300: 2.610145e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47986
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.726e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.421e0

DP
type: SiteQuality
SIO_000300: 2.610091e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.283e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.68e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

VQSLOD
type: SiteQuality
SIO_000300: 4.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.168056018672891e-5
allele num: 47984
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8517
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

QD
type: SiteQuality
SIO_000300: 2.002e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

MQ
type: SiteQuality
SIO_000300: 5.76e1

DP
type: SiteQuality
SIO_000300: 2.609955e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.509e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089689472144439e-5
allele num: 47854
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.421e1

DP
type: SiteQuality
SIO_000300: 2.600635e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 91

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.026939763898698e-4
allele num: 9911
num of homozygotes: 0

Latino
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allele count: 11
allele frequency: 1.180004290924694e-3
allele num: 9322
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.507840772014475e-4
allele num: 6632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
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allele count: 52
allele frequency: 6.146572104018913e-3
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 5.43773790103317e-4
allele num: 47814
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.811e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.608025e6

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8333
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9159
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 2.55977e6

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.93e-1

MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.201923076923077e-4
allele num: 8320
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 616
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East Asian
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allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47433
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.011e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8251
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.11738799017532e-5
allele num: 47228
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 8697
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9295
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -6.812e-1

DP
type: SiteQuality
SIO_000300: 2.542551e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8051
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6561
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.143301112373277e-5
allele num: 46657
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 597
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.515875e6

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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QD
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.12369871402327e-4
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7431
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 2.498633e6

FS
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.895e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.246e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.989e1

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.1658616880726e-5
allele num: 46171
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 587
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7891
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.44e1

VQSLOD
type: SiteQuality
SIO_000300: 8.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.662e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.591e0

FS
type: SiteQuality
SIO_000300: 1.466e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.491441e6

MQ
type: SiteQuality
SIO_000300: 5.904e1

GenotypeQuality
all individuals: 166
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6517
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 589
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46100
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.170141784820684e-4
allele num: 7194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7871
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.918e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.446e0

MQRankSum
type: SiteQuality
SIO_000300: -9.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.48831e6

QD
type: SiteQuality
SIO_000300: 2.114e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

GenotypeQuality
all individuals: 5021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 577
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7795
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.17964646134397e-5
allele num: 45879
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9221
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.917e0

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
SIO_000300: 2.473901e6

FS
type: SiteQuality
SIO_000300: 1.651e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.846e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 145
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4871
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22210
bin: 9.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45571
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6473
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

DP
type: SiteQuality
SIO_000300: 2.45222e6

QD
type: SiteQuality
SIO_000300: 2.308e1

GenotypeQuality
all individuals: 22210
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45277
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6439
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9189
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.120611639881417e-4
allele num: 6409
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7591
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.218e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.425951e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.215e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.367e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 22208
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 638
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7553
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 559
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.2129768965212e-5
allele num: 45188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.218770800976259e-4
allele num: 4507
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.572821642025794e-4
allele num: 6358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6431
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.082e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 2.418494e6

QD
type: SiteQuality
SIO_000300: 2.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7527
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 557
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9179
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.579030475288173e-4
allele num: 6333
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 2.993e1

DP
type: SiteQuality
SIO_000300: 2.41442e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6185
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7405
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.471771939631079e-5
allele num: 44725
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4507
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.428e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.981e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 2.395973e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.675e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 679
bin: 1.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 2.5e-2
allele num: 160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 757
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.52e-2

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 4.666e1

DP
type: SiteQuality
SIO_000300: 6.6266e4

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

QD
type: SiteQuality
SIO_000300: 6.21e0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.321003963011889e-3
allele num: 757
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.666e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.52e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

QD
type: SiteQuality
SIO_000300: 6.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 6.6266e4

GenotypeQuality
all individuals: 2729
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2976
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 965
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 85
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.285e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

QD
type: SiteQuality
SIO_000300: 4.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.58e-2

DP
type: SiteQuality
SIO_000300: 1.08022e5

GenotypeQuality
all individuals: 796
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 115
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 273
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 151
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.961e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

QD
type: SiteQuality
SIO_000300: 4.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.86e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

DP
type: SiteQuality
SIO_000300: 1.42742e5

GenotypeQuality
all individuals: 206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1395
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 273
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 67
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.133e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.322e1

DP
type: SiteQuality
SIO_000300: 1.52952e5

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.66e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31470
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 50
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 135
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 337
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 1.606425702811245e-2
allele num: 249
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.98e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.27e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 1.71291e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

GenotypeQuality
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 241
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 299
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 111
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1849
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.84176e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 5.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.85e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeQuality
all individuals: 53
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30860
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9830
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 263
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 159
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.71e-2

DP
type: SiteQuality
SIO_000300: 1.90442e5

VQSLOD
type: SiteQuality
SIO_000300: -1.153e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.134e1

QD
type: SiteQuality
SIO_000300: 2.544e1

GenotypeQuality
all individuals: 16690
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3679
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 335
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 679
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 277
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.111e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.792e1

DP
type: SiteQuality
SIO_000300: 2.72947e5