19-18541662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541662
    reference: chr 19
allele count: 8
allele frequency: 7.019514249613927e-5
allele num: 113968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.357C>T
  hgvsp: ENST00000597724.2:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.291C>T
  hgvsp: ENST00000270061.7:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.-16C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.510C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.-16C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.291C>T
  hgvsp: ENST00000348495.6:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*64C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*304C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.276C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala97Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-18541663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541663
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541663
    reference: chr 19
allele count: 4
allele frequency: 3.501155381275821e-5
allele num: 114248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.277G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.-15G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.292G>A
  hgvsp: ENSP00000252807.7:p.Ala98Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.-15G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.358G>A
  hgvsp: ENSP00000475538.2:p.Ala120Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*65G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*305G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.292G>A
  hgvsp: ENSP00000270061.5:p.Ala98Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.511G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39517
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala98Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

19-18541675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541675
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541675
    reference: chr 19
allele count: 2
allele frequency: 1.717917883525167e-5
allele num: 116420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.523G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*77G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.-3G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.370G>A
  hgvsp: ENSP00000475538.2:p.Val124Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.304G>A
  hgvsp: ENSP00000252807.7:p.Val102Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*317G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.289G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.304G>A
  hgvsp: ENSP00000270061.5:p.Val102Ile
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12211
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val102Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

19-18541683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541683
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541683
    reference: chr 19
allele count: 1
allele frequency: 8.533005665915763e-6
allele num: 117192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.312G>A
  hgvsp: ENST00000348495.6:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*325G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.6G>A
  hgvsp: ENST00000601357.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.297G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.378G>A
  hgvsp: ENST00000597724.2:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.6G>A
  hgvsp: ENST00000602088.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.312G>A
  hgvsp: ENST00000270061.7:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.531G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*85G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41083
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48183
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly104Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

19-18541689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541689
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541689
    reference: chr 19
allele count: 1
allele frequency: 8.519048592653172e-6
allele num: 117384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.537G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.318G>T
  hgvsp: ENSP00000252807.7:p.Met106Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*331G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.12G>T
  hgvsp: ENSP00000476084.2:p.Met4Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.303G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.12G>T
  hgvsp: ENSP00000475668.2:p.Met4Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*91G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.384G>T
  hgvsp: ENSP00000475538.2:p.Met128Ile
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.318G>T
  hgvsp: ENSP00000270061.5:p.Met106Ile
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met106Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

19-18541697-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541697
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541697
    reference: chr 19
allele count: 1
allele frequency: 8.513391564931637e-6
allele num: 117462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.326G>A
  hgvsp: ENSP00000252807.7:p.Gly109Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*99G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.392G>A
  hgvsp: ENSP00000475538.2:p.Gly131Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.326G>A
  hgvsp: ENSP00000270061.5:p.Gly109Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*339G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.311G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.20G>A
  hgvsp: ENSP00000475668.2:p.Gly7Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.20G>A
  hgvsp: ENSP00000476084.2:p.Gly7Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.545G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly109Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

19-18541699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541699
    reference: chr 19
allele count: 1
allele frequency: 8.515131388477325e-6
allele num: 117438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.547G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.328G>A
  hgvsp: ENSP00000270061.5:p.Asp110Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.394G>A
  hgvsp: ENSP00000475538.2:p.Asp132Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.22G>A
  hgvsp: ENSP00000476084.2:p.Asp8Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.313G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.328G>A
  hgvsp: ENSP00000252807.7:p.Asp110Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.22G>A
  hgvsp: ENSP00000475668.2:p.Asp8Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*101G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*341G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp110Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/19-18541704-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541704
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541704
    reference: chr 19
allele count: 1
allele frequency: 8.528348229514908e-6
allele num: 117256
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*346A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.27A>C
  hgvsp: ENST00000602088.3:c.27A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.27A>C
  hgvsp: ENST00000601357.2:c.27A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.333A>C
  hgvsp: ENST00000348495.6:c.333A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*106A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.333A>C
  hgvsp: ENST00000270061.7:c.333A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.399A>C
  hgvsp: ENST00000597724.2:c.399A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.552A>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13039
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr111Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

19-18541705-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541705
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541705
    reference: chr 19
allele count: 1
allele frequency: 8.530239699735563e-6
allele num: 117230
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.553A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.334A>G
  hgvsp: ENSP00000252807.7:p.Met112Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.334A>G
  hgvsp: ENSP00000270061.5:p.Met112Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.319A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*347A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.28A>G
  hgvsp: ENSP00000475668.2:p.Met10Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.28A>G
  hgvsp: ENSP00000476084.2:p.Met10Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.400A>G
  hgvsp: ENSP00000475538.2:p.Met134Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*107A>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13039
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met112Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-18541710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541710
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541710
    reference: chr 19
allele count: 4
allele frequency: 3.420089606347686e-5
allele num: 116956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.558C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.33C>T
  hgvsp: ENST00000602088.3:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*112C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*352C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.33C>T
  hgvsp: ENST00000601357.2:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.324C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.405C>T
  hgvsp: ENST00000597724.2:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.339C>T
  hgvsp: ENST00000348495.6:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.339C>T
  hgvsp: ENST00000270061.7:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12961
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala113Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

19-18541711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541711
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541711
    reference: chr 19
allele count: 8
allele frequency: 6.844861220438756e-5
allele num: 116876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.406G>A
  hgvsp: ENSP00000475538.2:p.Ala136Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*353G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.340G>A
  hgvsp: ENSP00000252807.7:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.34G>A
  hgvsp: ENSP00000475668.2:p.Ala12Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.559G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.340G>A
  hgvsp: ENSP00000270061.5:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.325G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.34G>A
  hgvsp: ENSP00000476084.2:p.Ala12Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*113G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39517
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala114Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

19-18541715-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541715
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541715
    reference: chr 19
allele count: 1
allele frequency: 8.590622476504648e-6
allele num: 116406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.344G>T
  hgvsp: ENSP00000252807.7:p.Gly115Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.38G>T
  hgvsp: ENSP00000475668.2:p.Gly13Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*357G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.563G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.329G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.38G>T
  hgvsp: ENSP00000476084.2:p.Gly13Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.344G>T
  hgvsp: ENSP00000270061.5:p.Gly115Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.410G>T
  hgvsp: ENSP00000475538.2:p.Gly137Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*117G>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12840
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly115Val
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-18541720-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541720
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541720
    reference: chr 19
allele count: 1
allele frequency: 8.626341396087092e-6
allele num: 115924
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.349A>C
  hgvsp: ENSP00000270061.5:p.Met117Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.568A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.43A>C
  hgvsp: ENSP00000475668.2:p.Met15Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.415A>C
  hgvsp: ENSP00000475538.2:p.Met139Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*122A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.349A>C
  hgvsp: ENSP00000252807.7:p.Met117Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.334A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*362A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.43A>C
  hgvsp: ENSP00000476084.2:p.Met15Leu
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38298
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met117Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

19-18541720-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541720
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541720
    reference: chr 19
allele count: 7
allele frequency: 6.038438977260964e-5
allele num: 115924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.568A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.415A>G
  hgvsp: ENSP00000475538.2:p.Met139Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.43A>G
  hgvsp: ENSP00000475668.2:p.Met15Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.43A>G
  hgvsp: ENSP00000476084.2:p.Met15Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.334A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*362A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.349A>G
  hgvsp: ENSP00000252807.7:p.Met117Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.349A>G
  hgvsp: ENSP00000270061.5:p.Met117Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*122A>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38298
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45403
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met117Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-18541721-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541721
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541721
    reference: chr 19
allele count: 3
allele frequency: 2.592150966872311e-5
allele num: 115734
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.350T>C
  hgvsp: ENSP00000270061.5:p.Met117Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*363T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.416T>C
  hgvsp: ENSP00000475538.2:p.Met139Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.350T>C
  hgvsp: ENSP00000252807.7:p.Met117Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.569T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.44T>C
  hgvsp: ENSP00000475668.2:p.Met15Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.335T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.44T>C
  hgvsp: ENSP00000476084.2:p.Met15Thr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*123T>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12548
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met117Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

19-18541724-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541724
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541724
    reference: chr 19
allele count: 10
allele frequency: 8.660558086363085e-5
allele num: 115466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*366C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.47C>T
  hgvsp: ENSP00000476084.2:p.Ala16Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*126C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.47C>T
  hgvsp: ENSP00000475668.2:p.Ala16Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.338C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.353C>T
  hgvsp: ENSP00000270061.5:p.Ala118Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.572C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.419C>T
  hgvsp: ENSP00000475538.2:p.Ala140Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.353C>T
  hgvsp: ENSP00000252807.7:p.Ala118Val
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37811
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala118Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-18541725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541725
    reference: chr 19
allele count: 5
allele frequency: 4.331254331254331e-5
allele num: 115440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.339G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.420G>A
  hgvsp: ENST00000597724.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.48G>A
  hgvsp: ENST00000602088.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.573G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.354G>A
  hgvsp: ENST00000270061.7:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.354G>A
  hgvsp: ENST00000348495.6:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.48G>A
  hgvsp: ENST00000601357.2:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*127G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*367G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala118Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

19-18541725-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541725
    reference: chr 19
allele count: 3
allele frequency: 2.598752598752599e-5
allele num: 115440
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.354G>T
  hgvsp: ENST00000270061.7:c.354G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.339G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.48G>T
  hgvsp: ENST00000601357.2:c.48G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.48G>T
  hgvsp: ENST00000602088.3:c.48G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.573G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*367G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*127G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.354G>T
  hgvsp: ENST00000348495.6:c.354G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.420G>T
  hgvsp: ENST00000597724.2:c.420G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37859
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala118Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

19-18541726-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541726
    reference: chr 19
allele count: 1
allele frequency: 8.666712889135408e-6
allele num: 115384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*368G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.574G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.355G>C
  hgvsp: ENSP00000252807.7:p.Ala119Pro
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*128G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.340G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.355G>C
  hgvsp: ENSP00000270061.5:p.Ala119Pro
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.49G>C
  hgvsp: ENSP00000475668.2:p.Ala17Pro
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.49G>C
  hgvsp: ENSP00000476084.2:p.Ala17Pro
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.421G>C
  hgvsp: ENSP00000475538.2:p.Ala141Pro
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala119Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-18541726-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541726
    reference: chr 19
allele count: 1
allele frequency: 8.666712889135408e-6
allele num: 115384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.355G>T
  hgvsp: ENSP00000270061.5:p.Ala119Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.340G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*128G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.49G>T
  hgvsp: ENSP00000476084.2:p.Ala17Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.421G>T
  hgvsp: ENSP00000475538.2:p.Ala141Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*368G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.49G>T
  hgvsp: ENSP00000475668.2:p.Ala17Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.355G>T
  hgvsp: ENSP00000252807.7:p.Ala119Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.574G>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala119Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD

19-18541746-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541746
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541746
    reference: chr 19
allele count: 3
allele frequency: 2.680055030463292e-5
allele num: 111938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+6G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+6G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
hgvs: c.369+6G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/19-18541749-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541749
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541749
    reference: chr 19
allele count: 2
allele frequency: 1.791440497303882e-5
allele num: 111642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+9C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+9C>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28606
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

19-18541750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541750
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541750
    reference: chr 19
allele count: 2
allele frequency: 1.79704206875483e-5
allele num: 111294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+10C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+10C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27874
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

19-18541751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541751
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541751
    reference: chr 19
allele count: 1
allele frequency: 8.991673710144407e-6
allele num: 111214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+11G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+11G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-18541760-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541760
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541760
    reference: chr 19
allele count: 7
allele frequency: 6.394796462764014e-5
allele num: 109464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+20C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+20C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21726
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12469
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 9.75e1
  variant carriers: 7
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-18541760-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541760
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541760
    reference: chr 19
allele count: 2
allele frequency: 1.827084703646861e-5
allele num: 109464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+20C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+20C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

19-18541766-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541765
    reference: chr 19
allele count: 11
allele frequency: 1.010955076832586e-4
allele num: 108808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+31delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+31delC
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15786
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20178
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8414
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: GC
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

19-18541769-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541769
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541769
    reference: chr 19
allele count: 3
allele frequency: 2.765588701648291e-5
allele num: 108476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+29C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+29C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10335
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-18541773-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541773
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541773
    reference: chr 19
allele count: 1
allele frequency: 9.292125852552546e-6
allele num: 107618
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+33A>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+33A>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15442
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16151
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-18541776-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541776
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541776
    reference: chr 19
allele count: 1
allele frequency: 9.338812103100485e-6
allele num: 107080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+36C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+36C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5635
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

19-18541785-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541785
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541785
    reference: chr 19
allele count: 22956
allele frequency: 2.245700534131596e-1
allele num: 102222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+45C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+45C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15649
  bin: 1.75e1
  variant carriers: 6153
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 9.75e1
  variant carriers: 1480
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 16195
  bin: 1.25e1
  variant carriers: 5207
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 7.5e0
  variant carriers: 1761
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 2.75e1
  variant carriers: 1874
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.25e1
  variant carriers: 748
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 11258
  bin: 2.25e1
  variant carriers: 4068
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 1.75e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 2.5e0
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 5382
  bin: 6.25e1
  variant carriers: 349
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 4.25e1
  variant carriers: 202
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 3.75e1
  variant carriers: 343
num of homozygotes: 2504
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-18541785-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541785
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541785
    reference: chr 19
allele count: 6
allele frequency: 5.869577977343429e-5
allele num: 102222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+45C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+45C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16195
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

19-18541787-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18541787
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18541787
    reference: chr 19
allele count: 1
allele frequency: 9.955399808856324e-6
allele num: 100448
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.369+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*382+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.63+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*142+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.369+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.354+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.63+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.435+47T>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.588+47T>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7045
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2752
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-18542120-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542120
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542120
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 7744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-337T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-43T>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-43T>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8563
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-18542131-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542131
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542132
    reference: chr 19
allele count: 2
allele frequency: 2.535496957403651e-4
allele num: 7888
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-319dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-25dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-25dupC
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

19-18542131-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542131
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542130
    reference: chr 19
allele count: 17
allele frequency: 2.155172413793103e-3
allele num: 7888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-25delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-25delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-319delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-319delC
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8676
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 9.75e1
  variant carriers: 14
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: TC
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-18542132-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542132
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542132
    reference: chr 19
allele count: 2
allele frequency: 2.496878901373283e-4
allele num: 8010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-31C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-325C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-31C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8901
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/19-18542133-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542133
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542133
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 8302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-30C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-324C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-30C>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-18542134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542134
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542134
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 8574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-29C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-323C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-29C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34034
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

19-18542136-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542136
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542136
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 8806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-27C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-27C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-321C>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-321C>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4556
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6201
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-18542138-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542138
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542138
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 9040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-25C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-319C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-25C>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35282
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/19-18542139-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542139
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542139
    reference: chr 19
allele count: 10
allele frequency: 1.226692836113837e-3
allele num: 8152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-24A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-24A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-318A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-318A>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34696
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4774
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

19-18542142-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542142
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542142
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 9766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-21C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-315C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-21C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-315C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9435
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3137
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/19-18542143-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542143
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542143
    reference: chr 19
allele count: 1
allele frequency: 1.086248099065827e-4
allele num: 9206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.370-20A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.355-20A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-314A>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-314A>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5251
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31347
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

19-18542164-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542165
    reference: chr 19
allele count: 2
allele frequency: 1.759324419422942e-4
allele num: 11368
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.378dupC
  hgvsp: ENSP00000270061.5:p.Gly127ArgfsTer152
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.363dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-286dupC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-286dupC
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18456
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26754
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly127ArgfsTer152
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-18542164-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542163
    reference: chr 19
allele count: 9
allele frequency: 7.916959887403237e-4
allele num: 11368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.363delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-286delC
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.378delC
  hgvsp: ENSP00000270061.5:p.Gly127AlafsTer13
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18456
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly127AlafsTer13
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: GC
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP

19-18542168-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542168
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542168
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 14992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.360C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.375C>T
  hgvsp: ENST00000270061.7:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-289C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-289C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21016
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro125Pro
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

19-18542172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542172
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542172
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 15580
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.379G>A
  hgvsp: ENSP00000270061.5:p.Gly127Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.364G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-285G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-285G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25297
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly127Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

19-18542180-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542180
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542180
    reference: chr 19
allele count: 1
allele frequency: 4.626630887387804e-5
allele num: 21614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.387G>T
  hgvsp: ENSP00000270061.5:p.Gln129His
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.372G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-277G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-277G>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln129His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

19-18542181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542181
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542181
    reference: chr 19
allele count: 1
allele frequency: 4.463090243684727e-5
allele num: 22406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.388C>T
  hgvsp: ENSP00000270061.5:p.Pro130Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.373C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-276C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-276C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15850
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro130Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-18542182-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542182
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542182
    reference: chr 19
allele count: 1
allele frequency: 4.309973278165675e-5
allele num: 23202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.389C>T
  hgvsp: ENSP00000270061.5:p.Pro130Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-275C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.374C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-275C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30528
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro130Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-18542183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542183
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542183
    reference: chr 19
allele count: 412
allele frequency: 1.73022005711406e-2
allele num: 23812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.375G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.390G>A
  hgvsp: ENST00000270061.7:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-274G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-274G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14969
  bin: 2.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30789
  bin: 7.5e0
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 1.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 9.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.75e1
  variant carriers: 7
hgvs: p.Pro130Pro
num of homozygotes: 2
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-18542190-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542190
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542190
    reference: chr 19
allele count: 10
allele frequency: 3.309943068979213e-4
allele num: 30212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.382C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.397C>A
  hgvsp: ENSP00000270061.5:p.His133Asn
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-267C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-267C>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 31990
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32721
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11176
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 9.75e1
  variant carriers: 5
hgvs: p.His133Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-18542196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542196
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542196
    reference: chr 19
allele count: 1
allele frequency: 2.886336084973734e-5
allele num: 34646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.388C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.403C>T
  hgvsp: ENSP00000270061.5:p.Pro135Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-261C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-261C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro135Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-18542200-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542200
    reference: chr 19
allele count: 37
allele frequency: 9.942494760036545e-4
allele num: 37214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.407A>G
  hgvsp: ENSP00000270061.5:p.Asn136Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.392A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-257A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-257A>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31691
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9517
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn136Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-18542201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542201
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542201
    reference: chr 19
allele count: 961
allele frequency: 2.502864881758517e-2
allele num: 38396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.393C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.408C>T
  hgvsp: ENST00000270061.7:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-256C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-256C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 2.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 2.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8427
  bin: 2.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 31150
  bin: 7.5e0
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 1.25e1
  variant carriers: 370
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.75e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 9.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 9.75e1
  variant carriers: 755
genotype quality: GenotypeQuality
  all individuals: 8193
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 3.25e1
  variant carriers: 21
hgvs: p.Asn136Asn
num of homozygotes: 32
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-18542203-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542203
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542203
    reference: chr 19
allele count: 1
allele frequency: 2.535882740782066e-5
allele num: 39434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.410C>A
  hgvsp: ENSP00000270061.5:p.Ala137Asp
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-254C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.395C>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-254C>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10366
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala137Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

19-18542208-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542208
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542208
    reference: chr 19
allele count: 68
allele frequency: 1.627728839525086e-3
allele num: 41776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.400A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.415A>G
  hgvsp: ENSP00000270061.5:p.Met139Val
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-249A>G
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-249A>G
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30512
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11253
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met139Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-18542216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542216
    reference: chr 19
allele count: 1
allele frequency: 2.331219694143976e-5
allele num: 42896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.423G>A
  hgvsp: ENST00000270061.7:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.408G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-241G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-241G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly141Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

19-18542218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542218
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542218
    reference: chr 19
allele count: 6
allele frequency: 1.39017608897127e-4
allele num: 43160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.410C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.425C>T
  hgvsp: ENSP00000270061.5:p.Pro142Leu
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-239C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-239C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29695
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7962
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro142Leu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-18542220-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542220
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542220
    reference: chr 19
allele count: 1
allele frequency: 2.313957793409848e-5
allele num: 43216
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.427C>T
  hgvsp: ENSP00000270061.5:p.His143Tyr
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-237C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.412C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-237C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His143Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

19-18542222-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542222
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542222
    reference: chr 19
allele count: 3
allele frequency: 6.938662225922843e-5
allele num: 43236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.414C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.429C>T
  hgvsp: ENST00000270061.7:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-235C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-235C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His143His
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

19-18542223-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542223
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542223
    reference: chr 19
allele count: 4
allele frequency: 9.262689885142645e-5
allele num: 43184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.415G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.430G>A
  hgvsp: ENSP00000270061.5:p.Gly144Ser
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-234G>A
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-234G>A
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly144Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

19-18542223-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542223
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542223
    reference: chr 19
allele count: 1
allele frequency: 2.315672471285661e-5
allele num: 43184
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.430G>C
  hgvsp: ENSP00000270061.5:p.Gly144Arg
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.415G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-234G>C
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-234G>C
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly144Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-18542241-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542241
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542241
    reference: chr 19
allele count: 1
allele frequency: 2.383676582761251e-5
allele num: 41952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+13G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+13G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-216G>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-216G>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10493
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-18542247-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542247
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542246
    reference: chr 19
allele count: 1
allele frequency: 2.502627759147104e-5
allele num: 39958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+20delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+20delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-209delG
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-209delG
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21728
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26802
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: TG
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

19-18542250-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542250
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542250
    reference: chr 19
allele count: 2
allele frequency: 5.319997872000851e-5
allele num: 37594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+22C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+22C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-207C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-207C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19579
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21806
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

19-18542251-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542251
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542251
    reference: chr 19
allele count: 1
allele frequency: 2.656748140276302e-5
allele num: 37640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+23C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+23C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-206C>T
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-206C>T
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-18542253-T-TCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542255
    reference: chr 19
allele count: 9
allele frequency: 2.723806065008171e-4
allele num: 33042
alternate allele: TCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-193_370-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+36_435+37dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-193_64-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-193_64-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-193_589-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+36_420+37dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-193_*383-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-193_436-192dupCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-193_*143-192dupCA
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20026
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18351
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19805
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-18542253-TCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18542253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 18542251
    reference: chr 19
allele count: 35
allele frequency: 1.059257914169845e-3
allele num: 33042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000472975
  ensembl transcript: ENST00000601614
  gene symbol: SSBP4
  hgvsc: ENST00000601614.2:c.*383-193_*383-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000598159
  gene symbol: SSBP4
  hgvsc: ENST00000598159.2:n.589-193_589-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476092
  ensembl transcript: ENST00000607020
  gene symbol: SSBP4
  hgvsc: ENST00000607020.1:c.*143-193_*143-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000252807
  ensembl transcript: ENST00000348495
  gene symbol: SSBP4
  hgvsc: ENST00000348495.6:c.370-193_370-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475668
  ensembl transcript: ENST00000601357
  gene symbol: SSBP4
  hgvsc: ENST00000601357.2:c.64-193_64-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000476084
  ensembl transcript: ENST00000602088
  gene symbol: SSBP4
  hgvsc: ENST00000602088.3:c.64-193_64-192delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000270061
  ensembl transcript: ENST00000270061
  gene symbol: SSBP4
  hgvsc: ENST00000270061.7:c.435+36_435+37delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl transcript: ENST00000600628
  gene symbol: SSBP4
  hgvsc: ENST00000600628.2:n.420+36_420+37delCA
  variant of: http://identifiers.org/hgnc/15676
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130511
  ensembl protein: ENSP00000475538
  ensembl transcript: ENST00000597724
  gene symbol: SSBP4
  hgvsc: ENST00000597724.2:c.436-193_436-192delCA
  variant of: http://identifiers.org/hgnc/15676
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20026
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18351
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: TCA

GenotypeQuality
all individuals: 812
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3805
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44766
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.970862192500597e-4
allele num: 8374
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.91583452211127e-5
allele num: 11216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.594591146829953e-5
allele num: 62712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.32351081320349e-5
allele num: 15814
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 8.208e0

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.345627e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

GenotypeQuality
all individuals: 44609
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.182179793158313e-5
allele num: 62850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.911067545891998e-5
allele num: 11222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.302785831337451e-5
allele num: 15866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 1.352645e6

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.2763e1

VQSLOD
type: SiteQuality
SIO_000300: -2.516e0

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.125292996218395e-5
allele num: 63994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

FS
type: SiteQuality
SIO_000300: 1.2712e1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 1.383592e6

VQSLOD
type: SiteQuality
SIO_000300: -1.564e0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.775008775008775e-5
allele num: 11396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 8.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.394087e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.736e0

QD
type: SiteQuality
SIO_000300: 9.52e0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 713
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110975311659741e-5
allele num: 16364
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.198e0

FS
type: SiteQuality
SIO_000300: 9.347e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.203e0

DP
type: SiteQuality
SIO_000300: 1.396501e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 5.854e1

QD
type: SiteQuality
SIO_000300: 7.05e0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2239
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550579916888916e-5
allele num: 64492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.397277e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.009e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -1.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 714
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48217
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550964700043427e-5
allele num: 64476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

FS
type: SiteQuality
SIO_000300: 1.076e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

DP
type: SiteQuality
SIO_000300: 1.397266e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.764e0

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.157407407407407e-3
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64356
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.218e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.394145e6

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

FS
type: SiteQuality
SIO_000300: 3.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 648
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554243083618278e-5
allele num: 64340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.554e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.544e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

FS
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.393319e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.91e-1

GenotypeQuality
all individuals: 1097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47212
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175917215428034e-4
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.804366966015144e-5
allele num: 11358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11468261384165e-5
allele num: 64212
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.93e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.369e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 3.502e0

DP
type: SiteQuality
SIO_000300: 1.388776e6

QD
type: SiteQuality
SIO_000300: 9.18e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 6.75e1
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GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.284481240091598e-4
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11701265507138e-5
allele num: 64164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.389371e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

QD
type: SiteQuality
SIO_000300: 7.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.64e-1

GenotypeQuality
all individuals: 1054
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 713
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variant carriers: 1

GenotypeQuality
all individuals: 241
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variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.134969325153375e-5
allele num: 16300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

DP
type: SiteQuality
SIO_000300: 1.377141e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.992e0

VQSLOD
type: SiteQuality
SIO_000300: -4.458e-1

QD
type: SiteQuality
SIO_000300: 7.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3691
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 619
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 306
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 541
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variant carriers: 0

GenotypeQuality
all individuals: 45403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573366059347368e-5
allele num: 63558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.178e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 1.133e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 1.36795e6

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 1041
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GenotypeQuality
all individuals: 719
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.101356241543157e-4
allele num: 63558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 1.133e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

DP
type: SiteQuality
SIO_000300: 1.36795e6

QD
type: SiteQuality
SIO_000300: 1.178e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 347
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
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GenotypeQuality
all individuals: 715
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 245
bin: 4.75e1
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GenotypeQuality
all individuals: 3789
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1058
bin: 7.75e1
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GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.336448598130841e-3
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63418
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.146281499692685e-5
allele num: 16270
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

QD
type: SiteQuality
SIO_000300: 1.457e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

DP
type: SiteQuality
SIO_000300: 1.364932e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1024
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GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 312
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GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.579080343607883e-4
allele num: 63328
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.360197e6

FS
type: SiteQuality
SIO_000300: 1.727e0

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

MQRankSum
type: SiteQuality
SIO_000300: 7.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 2.25e1
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GenotypeQuality
all individuals: 115
bin: 1.25e1
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GenotypeQuality
all individuals: 150
bin: 1.75e1
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GenotypeQuality
all individuals: 449
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GenotypeQuality
all individuals: 163
bin: 5.75e1
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GenotypeQuality
all individuals: 306
bin: 9.25e1
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GenotypeQuality
all individuals: 44897
bin: 6.25e1
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GenotypeQuality
all individuals: 150
bin: 4.25e1
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GenotypeQuality
all individuals: 4440
bin: 6.75e1
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GenotypeQuality
all individuals: 243
bin: 8.75e1
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GenotypeQuality
all individuals: 1025
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GenotypeQuality
all individuals: 718
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 329
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GenotypeQuality
all individuals: 715
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.320912739799627e-5
allele num: 63282
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.887308922858158e-5
allele num: 11252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

DP
type: SiteQuality
SIO_000300: 1.359659e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 449
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.160456369899814e-5
allele num: 63282
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.887308922858158e-5
allele num: 11252
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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SIO_000300: 7.2e-1

QD
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VQSLOD
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InbreedingCoeff
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SIO_000300: 2.3e-3

FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.77e-1

MQ
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SIO_000300: 5.965e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63252
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 850
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 1.046462955211386e-4
allele num: 9556
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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DP
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 850
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East Asian
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allele count: 1
allele frequency: 1.187084520417854e-4
allele num: 8424
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63252
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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DP
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FS
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5528
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.689129365469749e-4
allele num: 8132
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61478
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11014
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 3.075e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.250584e6

BaseQRankSum
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SIO_000300: -2.677e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

QD
type: SiteQuality
SIO_000300: 8.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.262323426744528e-5
allele num: 61306
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.82e0

ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 61098
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European (Finnish)
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East Asian
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allele num: 8080
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African
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FS
type: SiteQuality
SIO_000300: 7.922e0

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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Latino
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Other
type: Population
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5254
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.327565553041395e-5
allele num: 60104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.13804e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.164e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.96e-1

GenotypeQuality
all individuals: 475
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 7.080329557157569e-4
allele num: 15536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7872
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.468e1

DP
type: SiteQuality
SIO_000300: 1.11637e6

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.172e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQ
type: SiteQuality
SIO_000300: 5.995e1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59594
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.441945846718678e-4
allele num: 8716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5258
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.896e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.201e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.333e0

DP
type: SiteQuality
SIO_000300: 1.094105e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.691303318337111e-5
allele num: 59126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7780
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

DP
type: SiteQuality
SIO_000300: 1.067004e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.703e1

FS
type: SiteQuality
SIO_000300: 8.468e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.101e-1

GenotypeQuality
all individuals: 721
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15068
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.499415052645263e-5
allele num: 15386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58814
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.058287e6

VQSLOD
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.569e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 1.546e0

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

GenotypeQuality
all individuals: 1308
bin: 6.75e1
variant carriers: 296

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 266

GenotypeQuality
all individuals: 8202
bin: 2.25e1
variant carriers: 199

GenotypeQuality
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bin: 2.75e1
variant carriers: 184

GenotypeQuality
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bin: 1.25e1
variant carriers: 114

GenotypeQuality
all individuals: 2367
bin: 4.75e1
variant carriers: 364

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 1144
bin: 5.25e1
variant carriers: 391

GenotypeQuality
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variant carriers: 252

GenotypeQuality
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bin: 7.25e1
variant carriers: 269

GenotypeQuality
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variant carriers: 17835

GenotypeQuality
all individuals: 660
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variant carriers: 311

GenotypeQuality
all individuals: 5418
bin: 3.25e1
variant carriers: 284

GenotypeQuality
all individuals: 382
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variant carriers: 248

GenotypeQuality
all individuals: 771
bin: 7.75e1
variant carriers: 309

African
type: Population
allele count: 2572
allele frequency: 3.216608304152076e-1
allele num: 7996
num of homozygotes: 416

Latino
type: Population
allele count: 3099
allele frequency: 3.064675632911392e-1
allele num: 10112
num of homozygotes: 434

European (Non-Finnish)
type: Population
allele count: 11652
allele frequency: 2.077671980314539e-1
allele num: 56082
num of homozygotes: 1090

South Asian
type: Population
allele count: 3301
allele frequency: 2.197443749167887e-1
allele num: 15022
num of homozygotes: 360

East Asian
type: Population
allele count: 1117
allele frequency: 1.527208094066174e-1
allele num: 7314
num of homozygotes: 83

European (Finnish)
type: Population
allele count: 1035
allele frequency: 2.094293808174828e-1
allele num: 4942
num of homozygotes: 98

Other
type: Population
allele count: 180
allele frequency: 2.387267904509284e-1
allele num: 754
num of homozygotes: 23

BaseQRankSum
type: SiteQuality
SIO_000300: -2.594e0

VQSLOD
type: SiteQuality
SIO_000300: 6.65e0

DP
type: SiteQuality
SIO_000300: 1.220089e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.17e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56082
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.367240907847963e-4
allele num: 7314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7996
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.328451604313673e-4
allele num: 15022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4942
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.594e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.17e-2

DP
type: SiteQuality
SIO_000300: 1.220089e6

QD
type: SiteQuality
SIO_000300: 1.489e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.65e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1565
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.775985905949315e-5
allele num: 14758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7194
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.021e0

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.145098e6

QD
type: SiteQuality
SIO_000300: 1.585e1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
all individuals: 274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 474
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GenotypeQuality
all individuals: 105
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GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 3435
bin: 2.25e1
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GenotypeQuality
all individuals: 56
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

DP
type: SiteQuality
SIO_000300: 2.3447e5

VQSLOD
type: SiteQuality
SIO_000300: -2.017e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.53e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
all individuals: 3731
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8676
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.814636494944632e-4
allele num: 4154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.951000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

DP
type: SiteQuality
SIO_000300: 2.45335e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -6.74e-1

GenotypeQuality
all individuals: 269
bin: 6.75e1
variant carriers: 3

GenotypeQuality
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bin: 1.75e1
variant carriers: 2

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 4.092441020702937e-3
allele num: 4154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.951000000000001e0

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -6.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.45335e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.793863854266539e-4
allele num: 4172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.213000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.46151e5

FS
type: SiteQuality
SIO_000300: 8.670999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.61e-2

QD
type: SiteQuality
SIO_000300: 1.374e1

GenotypeQuality
all individuals: 84
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8210
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 1

GenotypeQuality
all individuals: 279
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.847e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.4806e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 6.17e0

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 3818
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.987e-1

DP
type: SiteQuality
SIO_000300: 2.49426e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.56e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

GenotypeQuality
all individuals: 1262
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.56195e5

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

QD
type: SiteQuality
SIO_000300: 1.569e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.91e-2

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 2.63424e5

MQ
type: SiteQuality
SIO_000300: 5.395e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

QD
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.729999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 3

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 4

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 576
bin: 9.75e1
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GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.209131075110457e-3
allele num: 1358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 9.950248756218905e-4
allele num: 2010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.183151916706105e-3
allele num: 4226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.22e-2

DP
type: SiteQuality
SIO_000300: 2.72009e5

MQ
type: SiteQuality
SIO_000300: 5.805e1

VQSLOD
type: SiteQuality
SIO_000300: -1.137e1

FS
type: SiteQuality
SIO_000300: 5.2421e1

QD
type: SiteQuality
SIO_000300: 5.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 287
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GenotypeQuality
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GenotypeQuality
all individuals: 2169
bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 219
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.835e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 2.81989e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.199736031676199e-4
allele num: 4546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 1.3873e1

VQSLOD
type: SiteQuality
SIO_000300: -1.822e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.522e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.119999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 7.5e-1

MQ
type: SiteQuality
SIO_000300: 5.717e1

DP
type: SiteQuality
SIO_000300: 2.86288e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1542
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.063829787234043e-2
allele num: 94
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.879699248120301e-4
allele num: 5320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.44e-2

FS
type: SiteQuality
SIO_000300: 6.271e0

VQSLOD
type: SiteQuality
SIO_000300: -2.536e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 3.60849e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 8.828722778104767e-4
allele num: 3398
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.297016861219196e-3
allele num: 1542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.639097744360903e-4
allele num: 5320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.607717041800643e-3
allele num: 622
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.536e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

QD
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.44e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 6.271e0

DP
type: SiteQuality
SIO_000300: 3.60849e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.38e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 3.85422e5

FS
type: SiteQuality
SIO_000300: 3.791e0

QD
type: SiteQuality
SIO_000300: 7.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.16e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
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SIO_000300: 5.3e0

MQRankSum
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.516711833785004e-4
allele num: 2214
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 1228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10448
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.899e1

QD
type: SiteQuality
SIO_000300: 1.559e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

ClippingRankSum
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SIO_000300: 3.1e-2

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 1
allele frequency: 4.416961130742049e-4
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 851
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GenotypeQuality
all individuals: 145
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.688618709895306e-4
allele num: 5922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2302
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.29e0

VQSLOD
type: SiteQuality
SIO_000300: -1.948e0

DP
type: SiteQuality
SIO_000300: 5.03956e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1526
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 3367
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 14331
bin: 7.5e0
variant carriers: 11

GenotypeQuality
all individuals: 29686
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 146
bin: 7.75e1
variant carriers: 26

GenotypeQuality
all individuals: 1423
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 294
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 831
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 18

GenotypeQuality
all individuals: 113
bin: 8.25e1
variant carriers: 33

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 18

GenotypeQuality
all individuals: 225
bin: 5.25e1
variant carriers: 18

GenotypeQuality
all individuals: 934
bin: 9.75e1
variant carriers: 326

GenotypeQuality
all individuals: 465
bin: 6.75e1
variant carriers: 23

Latino
type: Population
allele count: 37
allele frequency: 2.527322404371585e-2
allele num: 1464
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 4.59866220735786e-3
allele num: 2392
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.577287066246057e-3
allele num: 1902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 346
allele frequency: 2.941676585614691e-2
allele num: 11762
num of homozygotes: 2

South Asian
type: Population
allele count: 11
allele frequency: 1.874573960463531e-3
allele num: 5868
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.0e-2
allele num: 200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 8.928571428571428e-3
allele num: 224
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.52e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
SIO_000300: 5.16694e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

GenotypeQuality
all individuals: 482
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 868
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.863987635239567e-4
allele num: 2588
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 3.679852805887764e-3
allele num: 2174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.574621959237344e-5
allele num: 15210
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 5.78309e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.795e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.36e-2

FS
type: SiteQuality
SIO_000300: 3.974e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 6.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.311991603253739e-4
allele num: 7622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17656
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

FS
type: SiteQuality
SIO_000300: 2.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.08e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

DP
type: SiteQuality
SIO_000300: 6.25269e5

QD
type: SiteQuality
SIO_000300: 5.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.75e1
variant carriers: 35

GenotypeQuality
all individuals: 8552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1077
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33088
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2852
num of homozygotes: 0

South Asian
type: Population
allele count: 35
allele frequency: 4.33382862803368e-3
allele num: 8076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.253756435851634e-5
allele num: 19034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.048780487804878e-4
allele num: 3280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

DP
type: SiteQuality
SIO_000300: 6.51741e5

GenotypeQuality
all individuals: 831
bin: 1.75e1
variant carriers: 26

GenotypeQuality
all individuals: 504
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 25

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 35

GenotypeQuality
all individuals: 32181
bin: 2.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1141
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 39

GenotypeQuality
all individuals: 203
bin: 7.75e1
variant carriers: 33

GenotypeQuality
all individuals: 906
bin: 6.75e1
variant carriers: 38

GenotypeQuality
all individuals: 9998
bin: 6.25e1
variant carriers: 37

GenotypeQuality
all individuals: 242
bin: 7.25e1
variant carriers: 35

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 17

GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 24

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 35

GenotypeQuality
all individuals: 572
bin: 3.75e1
variant carriers: 14

African
type: Population
allele count: 552
allele frequency: 1.473571809930593e-1
allele num: 3746
num of homozygotes: 30

Other
type: Population
allele count: 4
allele frequency: 1.538461538461539e-2
allele num: 260
num of homozygotes: 0

Latino
type: Population
allele count: 56
allele frequency: 1.882985877605918e-2
allele num: 2974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 17
allele frequency: 3.148148148148148e-2
allele num: 540
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 324
allele frequency: 1.65983606557377e-2
allele num: 19520
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3232
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 9.847365829640572e-4
allele num: 8124
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.905e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

DP
type: SiteQuality
SIO_000300: 6.67804e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
all individuals: 237
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7972
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32970
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 925
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3076
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3350
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.922e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.356e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 6.77963e5

GenotypeQuality
all individuals: 62
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7669
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 9.75e1
variant carriers: 79

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11795
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 32922
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8680
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.499700059988002e-3
allele num: 3334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

African
type: Population
allele count: 63
allele frequency: 1.655281135049921e-2
allele num: 3806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21450
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.79e-2

FS
type: SiteQuality
SIO_000300: 1.745e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 6.9565e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

GenotypeQuality
all individuals: 7867
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.570694087403599e-4
allele num: 3890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.01e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 6.96966e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

FS
type: SiteQuality
SIO_000300: 4.682e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1013
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 5.770340450086555e-4
allele num: 3466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.800828381055286e-4
allele num: 22212
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.786e0

DP
type: SiteQuality
SIO_000300: 6.96031e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

QD
type: SiteQuality
SIO_000300: 6.69e0

MQ
type: SiteQuality
SIO_000300: 5.752e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

FS
type: SiteQuality
SIO_000300: 2.717e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.49842555105713e-5
allele num: 22230
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.93856e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.86e-2

QD
type: SiteQuality
SIO_000300: 1.619e1

MQ
type: SiteQuality
SIO_000300: 5.878e1

VQSLOD
type: SiteQuality
SIO_000300: -2.581e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.86697247706422e-4
allele num: 3488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8938
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.54323499491353e-4
allele num: 3932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.499640028797696e-5
allele num: 22224
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

DP
type: SiteQuality
SIO_000300: 6.92135e5

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 9.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 2
allele frequency: 5.46448087431694e-4
allele num: 3660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.017132551848512e-5
allele num: 22180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.69e0

DP
type: SiteQuality
SIO_000300: 6.85976e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.09e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.827e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 205
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.73224043715847e-4
allele num: 3660
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 6.85976e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.09e-2

QD
type: SiteQuality
SIO_000300: 6.69e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.650730164635848e-5
allele num: 21502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 6.22363e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.79e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.147e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 1
allele frequency: 2.705627705627706e-4
allele num: 3696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.58e-2

MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.05708245243129e-4
allele num: 18920
num of homozygotes: 0

African
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2762
num of homozygotes: 0

East Asian
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allele num: 3050
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 5.6314e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.265374894692502e-5
allele num: 18992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0266e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.22e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.043e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

DP
type: SiteQuality
SIO_000300: 5.62474e5

QD
type: SiteQuality
SIO_000300: 1.502e1

GenotypeQuality
all individuals: 1510
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 573
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23612
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 549
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.450079627587897e-4
allele num: 16326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3272
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.367804381049414e-4
allele num: 7852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.36e-2

QD
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 6.621e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

VQSLOD
type: SiteQuality
SIO_000300: -3.096e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.55796e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1