19-52034374-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034374
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034374
    reference: chr 19
allele count: 160
allele frequency: 1.457540036802886e-3
allele num: 109774
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+40A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+40A>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19013
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7691
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8979
  bin: 9.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 24467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/19-52034381-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034381
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034381
    reference: chr 19
allele count: 2
allele frequency: 1.822555952467741e-5
allele num: 109736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+33G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+33G>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8904
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-52034388-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034388
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034388
    reference: chr 19
allele count: 1
allele frequency: 9.132420091324201e-6
allele num: 109500
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+26C>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8904
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17732
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

19-52034389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034389
    reference: chr 19
allele count: 611
allele frequency: 5.575733240860726e-3
allele num: 109582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+25C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+25C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7706
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19027
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 9.75e1
  variant carriers: 534
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 13
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

19-52034392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034392
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034392
    reference: chr 19
allele count: 57
allele frequency: 5.194379134999179e-4
allele num: 109734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+22T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+22T>C
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7801
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5765
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-52034393-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034393
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034393
    reference: chr 19
allele count: 39
allele frequency: 3.589639747436629e-4
allele num: 108646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+21C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+21C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19060
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-52034393-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034393
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034393
    reference: chr 19
allele count: 1
allele frequency: 9.204204480606742e-6
allele num: 108646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+21C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+21C>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-52034402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034402
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034402
    reference: chr 19
allele count: 2
allele frequency: 1.820200586104589e-5
allele num: 109878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+12G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+12G>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-52034405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034405
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034405
    reference: chr 19
allele count: 1
allele frequency: 9.090247981964949e-6
allele num: 110008
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427+9C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427+9C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5938
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

19-52034414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034414
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034414
    reference: chr 19
allele count: 1
allele frequency: 9.058627436770781e-6
allele num: 110392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.319G>A
  hgvsp: ENSP00000410679.1:p.Ala107Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.474G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.427G>A
  hgvsp: ENSP00000401502.2:p.Ala143Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.427G>A
  hgvsp: ENSP00000353071.4:p.Ala143Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.427G>A
  hgvsp: ENSP00000375674.3:p.Gly143Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.427G>A
  hgvsp: ENSP00000345907.4:p.Ala143Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.427G>A
  hgvsp: ENSP00000344064.4:p.Ala143Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.582G>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala143Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

19-52034417-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034417
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034417
    reference: chr 19
allele count: 1
allele frequency: 9.040610422015694e-6
allele num: 110612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.471A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.424A>T
  hgvsp: ENSP00000375674.3:p.Met142Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.424A>T
  hgvsp: ENSP00000344064.4:p.Met142Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.424A>T
  hgvsp: ENSP00000401502.2:p.Met142Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.424A>T
  hgvsp: ENSP00000345907.4:p.Met142Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.579A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.316A>T
  hgvsp: ENSP00000410679.1:p.Met106Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.424A>T
  hgvsp: ENSP00000353071.4:p.Met142Leu
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2969
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met142Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

19-52034431-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034431
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034431
    reference: chr 19
allele count: 1
allele frequency: 8.969575200918485e-6
allele num: 111488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.302T>C
  hgvsp: ENSP00000410679.1:p.Leu101Pro
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.410T>C
  hgvsp: ENSP00000353071.4:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.410T>C
  hgvsp: ENSP00000375674.3:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.565T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.410T>C
  hgvsp: ENSP00000344064.4:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.410T>C
  hgvsp: ENSP00000345907.4:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.457T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.410T>C
  hgvsp: ENSP00000401502.2:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu137Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

19-52034437-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034437
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034437
    reference: chr 19
allele count: 76
allele frequency: 6.788381149737397e-4
allele num: 111956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.404C>T
  hgvsp: ENSP00000345907.4:p.Ser135Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.404C>T
  hgvsp: ENSP00000401502.2:p.Ser135Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.404C>T
  hgvsp: ENSP00000375674.3:p.Ser135Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.296C>T
  hgvsp: ENSP00000410679.1:p.Ser99Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.404C>T
  hgvsp: ENSP00000344064.4:p.Ser135Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.559C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.404C>T
  hgvsp: ENSP00000353071.4:p.Ser135Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.451C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9046
  bin: 9.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 8997
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser135Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-52034448-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034448
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034448
    reference: chr 19
allele count: 1
allele frequency: 8.866348660294717e-6
allele num: 112786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.440T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.393T>C
  hgvsp: ENST00000391797.3:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.285T>C
  hgvsp: ENST00000436458.1:c.285T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.393T>C
  hgvsp: ENST00000346477.3:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.393T>C
  hgvsp: ENST00000425629.3:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.548T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.393T>C
  hgvsp: ENST00000343300.4:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.393T>C
  hgvsp: ENST00000359982.4:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9047
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly131Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-52034451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034451
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034451
    reference: chr 19
allele count: 1
allele frequency: 8.825034858887692e-6
allele num: 113314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.545C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.282C>T
  hgvsp: ENST00000436458.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.390C>T
  hgvsp: ENST00000391797.3:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.390C>T
  hgvsp: ENST00000346477.3:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.390C>T
  hgvsp: ENST00000343300.4:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.390C>T
  hgvsp: ENST00000425629.3:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.390C>T
  hgvsp: ENST00000359982.4:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.437C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9046
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26420
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr130Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-52034459-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034459
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034459
    reference: chr 19
allele count: 7
allele frequency: 6.11353711790393e-5
allele num: 114500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.537A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.382A>T
  hgvsp: ENSP00000345907.4:p.Met128Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.274A>T
  hgvsp: ENSP00000410679.1:p.Met92Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.382A>T
  hgvsp: ENSP00000375674.3:p.Met128Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.382A>T
  hgvsp: ENSP00000353071.4:p.Met128Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.382A>T
  hgvsp: ENSP00000344064.4:p.Met128Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.382A>T
  hgvsp: ENSP00000401502.2:p.Met128Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.429A>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17643
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met128Leu
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-52034462-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034462
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034462
    reference: chr 19
allele count: 1
allele frequency: 8.68357068426537e-6
allele num: 115160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.379T>A
  hgvsp: ENSP00000353071.4:p.Trp127Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.271T>A
  hgvsp: ENSP00000410679.1:p.Trp91Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.534T>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.379T>A
  hgvsp: ENSP00000375674.3:p.Trp127Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.426T>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.379T>A
  hgvsp: ENSP00000344064.4:p.Trp127Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.379T>A
  hgvsp: ENSP00000401502.2:p.Trp127Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.379T>A
  hgvsp: ENSP00000345907.4:p.Trp127Arg
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 19578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17640
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp127Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-52034464-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034464
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034464
    reference: chr 19
allele count: 1
allele frequency: 8.661308203991131e-6
allele num: 115456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.377A>G
  hgvsp: ENSP00000375674.3:p.Lys126Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.377A>G
  hgvsp: ENSP00000344064.4:p.Lys126Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.377A>G
  hgvsp: ENSP00000345907.4:p.Lys126Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.377A>G
  hgvsp: ENSP00000353071.4:p.Lys126Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.377A>G
  hgvsp: ENSP00000401502.2:p.Lys126Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.269A>G
  hgvsp: ENSP00000410679.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.424A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.532A>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys126Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-52034469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034469
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034469
    reference: chr 19
allele count: 17023
allele frequency: 1.450568365799206e-1
allele num: 117354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.264G>A
  hgvsp: ENST00000436458.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.372G>A
  hgvsp: ENST00000343300.4:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.372G>A
  hgvsp: ENST00000346477.3:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.419G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.372G>A
  hgvsp: ENST00000425629.3:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.372G>A
  hgvsp: ENST00000359982.4:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.372G>A
  hgvsp: ENST00000391797.3:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.527G>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 3.25e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 1.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 14415
  bin: 9.75e1
  variant carriers: 12398
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 503
genotype depth: GenotypeDepth
  all individuals: 19659
  bin: 2.75e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.5e0
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 2.25e1
  variant carriers: 508
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 8.75e1
  variant carriers: 262
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 26701
  bin: 6.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 7.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 2.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 1
hgvs: p.Lys124Lys
num of homozygotes: 1268
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

19-52034470-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034470
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034470
    reference: chr 19
allele count: 1
allele frequency: 8.502389171357152e-6
allele num: 117614
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.418A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.371A>G
  hgvsp: ENSP00000375674.3:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.371A>G
  hgvsp: ENSP00000401502.2:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.526A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.371A>G
  hgvsp: ENSP00000344064.4:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.263A>G
  hgvsp: ENSP00000410679.1:p.Lys88Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.371A>G
  hgvsp: ENSP00000353071.4:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.371A>G
  hgvsp: ENSP00000345907.4:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5896
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys124Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-52034474-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034474
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034474
    reference: chr 19
allele count: 1
allele frequency: 8.468978133098461e-6
allele num: 118078
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.414T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.367T>C
  hgvsp: ENST00000359982.4:c.367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.367T>C
  hgvsp: ENST00000425629.3:c.367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.259T>C
  hgvsp: ENST00000436458.1:c.259T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.367T>C
  hgvsp: ENST00000391797.3:c.367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.367T>C
  hgvsp: ENST00000346477.3:c.367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.522T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.367T>C
  hgvsp: ENST00000343300.4:c.367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu123Leu
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

19-52034477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034477
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034477
    reference: chr 19
allele count: 1
allele frequency: 8.431561019207096e-6
allele num: 118602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.364C>T
  hgvsp: ENSP00000345907.4:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.256C>T
  hgvsp: ENSP00000410679.1:p.Arg86Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.519C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.411C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.364C>T
  hgvsp: ENSP00000401502.2:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.364C>T
  hgvsp: ENSP00000353071.4:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.364C>T
  hgvsp: ENSP00000375674.3:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.364C>T
  hgvsp: ENSP00000344064.4:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg122Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-52034478-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034478
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034478
    reference: chr 19
allele count: 3
allele frequency: 2.525720251224974e-5
allele num: 118778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.363T>C
  hgvsp: ENST00000359982.4:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.363T>C
  hgvsp: ENST00000346477.3:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.518T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.410T>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.363T>C
  hgvsp: ENST00000425629.3:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.255T>C
  hgvsp: ENST00000436458.1:c.255T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.363T>C
  hgvsp: ENST00000343300.4:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.363T>C
  hgvsp: ENST00000391797.3:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe121Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

19-52034482-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034482
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034482
    reference: chr 19
allele count: 2
allele frequency: 1.67768345468577e-5
allele num: 119212
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.359T>A
  hgvsp: ENSP00000401502.2:p.Phe120Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.359T>A
  hgvsp: ENSP00000344064.4:p.Phe120Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.359T>A
  hgvsp: ENSP00000345907.4:p.Phe120Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.359T>A
  hgvsp: ENSP00000353071.4:p.Phe120Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.406T>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.514T>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.251T>A
  hgvsp: ENSP00000410679.1:p.Phe84Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.359T>A
  hgvsp: ENSP00000375674.3:p.Phe120Tyr
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5891
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Phe120Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-52034489-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034489
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034489
    reference: chr 19
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.399G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.244G>T
  hgvsp: ENSP00000410679.1:p.Ala82Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.352G>T
  hgvsp: ENSP00000344064.4:p.Ala118Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.352G>T
  hgvsp: ENSP00000401502.2:p.Ala118Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.352G>T
  hgvsp: ENSP00000375674.3:p.Ala118Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.352G>T
  hgvsp: ENSP00000345907.4:p.Ala118Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.352G>T
  hgvsp: ENSP00000353071.4:p.Ala118Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.507G>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38218
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala118Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

19-52034498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034498
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034498
    reference: chr 19
allele count: 4
allele frequency: 3.324799680819231e-5
allele num: 120308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.498G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.390G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.343G>A
  hgvsp: ENSP00000344064.4:p.Asp115Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.343G>A
  hgvsp: ENSP00000375674.3:p.Asp115Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.343G>A
  hgvsp: ENSP00000401502.2:p.Asp115Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.343G>A
  hgvsp: ENSP00000353071.4:p.Asp115Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.343G>A
  hgvsp: ENSP00000345907.4:p.Asp115Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.235G>A
  hgvsp: ENSP00000410679.1:p.Asp79Asn
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8399
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5887
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp115Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-52034506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034506
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034506
    reference: chr 19
allele count: 3477
allele frequency: 2.883228021294592e-2
allele num: 120594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.335G>A
  hgvsp: ENSP00000375674.3:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.382G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.335G>A
  hgvsp: ENSP00000345907.4:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.335G>A
  hgvsp: ENSP00000344064.4:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.335G>A
  hgvsp: ENSP00000353071.4:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.227G>A
  hgvsp: ENSP00000410679.1:p.Arg76Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.490G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.335G>A
  hgvsp: ENSP00000401502.2:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 14837
  bin: 2.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 9.75e1
  variant carriers: 2671
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 3.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 27464
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 2
hgvs: p.Arg112Gln
num of homozygotes: 61
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52034507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034507
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034507
    reference: chr 19
allele count: 81
allele frequency: 6.713745772826736e-4
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.226C>T
  hgvsp: ENSP00000410679.1:p.Arg76Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.334C>T
  hgvsp: ENSP00000344064.4:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.381C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.489C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.334C>T
  hgvsp: ENSP00000401502.2:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.334C>T
  hgvsp: ENSP00000345907.4:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.334C>T
  hgvsp: ENSP00000353071.4:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.334C>T
  hgvsp: ENSP00000375674.3:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29012
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg112Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

19-52034507-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034507
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034507
    reference: chr 19
allele count: 8
allele frequency: 6.630860022544923e-5
allele num: 120648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.334C>G
  hgvsp: ENSP00000375674.3:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.334C>G
  hgvsp: ENSP00000345907.4:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.381C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.489C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.226C>G
  hgvsp: ENSP00000410679.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.334C>G
  hgvsp: ENSP00000344064.4:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.334C>G
  hgvsp: ENSP00000401502.2:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.334C>G
  hgvsp: ENSP00000353071.4:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 8
hgvs: p.Arg112Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

19-52034518-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034518
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034517
    reference: chr 19
allele count: 3
allele frequency: 2.483443708609272e-5
allele num: 120800
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.322delA
  hgvsp: ENSP00000401502.2:p.Ile108SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.322delA
  hgvsp: ENSP00000375674.3:p.Ile108SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.322delA
  hgvsp: ENSP00000344064.4:p.Ile108SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.322delA
  hgvsp: ENSP00000353071.4:p.Ile108SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.369delA
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.322delA
  hgvsp: ENSP00000345907.4:p.Ile108SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.214delA
  hgvsp: ENSP00000410679.1:p.Ile72SerfsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.477delA
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile108SerfsTer16
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: AT
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

19-52034522-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034522
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034522
    reference: chr 19
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.211A>C
  hgvsp: ENSP00000410679.1:p.Ser71Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.319A>C
  hgvsp: ENSP00000353071.4:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.366A>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.319A>C
  hgvsp: ENSP00000375674.3:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.319A>C
  hgvsp: ENSP00000344064.4:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.319A>C
  hgvsp: ENSP00000401502.2:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.319A>C
  hgvsp: ENSP00000345907.4:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.474A>C
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser107Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

19-52034526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034526
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034526
    reference: chr 19
allele count: 2
allele frequency: 1.654889370645572e-5
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.207C>T
  hgvsp: ENST00000436458.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.315C>T
  hgvsp: ENST00000391797.3:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.315C>T
  hgvsp: ENST00000425629.3:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.315C>T
  hgvsp: ENST00000343300.4:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.315C>T
  hgvsp: ENST00000346477.3:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.470C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.315C>T
  hgvsp: ENST00000359982.4:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.362C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser105Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-52034539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034539
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034539
    reference: chr 19
allele count: 1
allele frequency: 8.270477702792114e-6
allele num: 120912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.349G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.302G>A
  hgvsp: ENSP00000375674.3:p.Arg101Lys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.302G>A
  hgvsp: ENSP00000401502.2:p.Arg101Lys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.194G>A
  hgvsp: ENSP00000410679.1:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.302G>A
  hgvsp: ENSP00000344064.4:p.Arg101Lys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.457G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.302G>A
  hgvsp: ENSP00000345907.4:p.Arg101Lys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.302G>A
  hgvsp: ENSP00000353071.4:p.Arg101Lys
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg101Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-52034549-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034549
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034549
    reference: chr 19
allele count: 1040
allele frequency: 8.597599285737905e-3
allele num: 120964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.292G>T
  hgvsp: ENSP00000344064.4:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.447G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.339G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.292G>T
  hgvsp: ENSP00000375674.3:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.184G>T
  hgvsp: ENSP00000410679.1:p.Asp62Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.292G>T
  hgvsp: ENSP00000401502.2:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.292G>T
  hgvsp: ENSP00000345907.4:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.292G>T
  hgvsp: ENSP00000353071.4:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 15255
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 9991
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 680
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29238
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8959
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp98Tyr
num of homozygotes: 11
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-52034551-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034551
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034551
    reference: chr 19
allele count: 1
allele frequency: 8.266102367411717e-6
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.290G>C
  hgvsp: ENSP00000345907.4:p.Trp97Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.290G>C
  hgvsp: ENSP00000353071.4:p.Trp97Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.182G>C
  hgvsp: ENSP00000410679.1:p.Trp61Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.337G>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.290G>C
  hgvsp: ENSP00000401502.2:p.Trp97Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.290G>C
  hgvsp: ENSP00000344064.4:p.Trp97Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.290G>C
  hgvsp: ENSP00000375674.3:p.Trp97Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.445G>C
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp97Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-52034555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034555
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034555
    reference: chr 19
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.441C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.286C>T
  hgvsp: ENSP00000353071.4:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.178C>T
  hgvsp: ENSP00000410679.1:p.Leu60Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.286C>T
  hgvsp: ENSP00000375674.3:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.286C>T
  hgvsp: ENSP00000345907.4:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.286C>T
  hgvsp: ENSP00000344064.4:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.286C>T
  hgvsp: ENSP00000401502.2:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.333C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu96Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-52034556-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034556
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034556
    reference: chr 19
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.285C>T
  hgvsp: ENST00000359982.4:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.285C>T
  hgvsp: ENST00000391797.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.177C>T
  hgvsp: ENST00000436458.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.332C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.440C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.285C>T
  hgvsp: ENST00000346477.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.285C>T
  hgvsp: ENST00000343300.4:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.285C>T
  hgvsp: ENST00000425629.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu95Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

19-52034559-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034559
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034559
    reference: chr 19
allele count: 2
allele frequency: 1.652155236506022e-5
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.282C>A
  hgvsp: ENSP00000401502.2:p.His94Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.282C>A
  hgvsp: ENSP00000375674.3:p.His94Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.282C>A
  hgvsp: ENSP00000344064.4:p.His94Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.282C>A
  hgvsp: ENSP00000353071.4:p.His94Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.437C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.174C>A
  hgvsp: ENSP00000410679.1:p.His58Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.282C>A
  hgvsp: ENSP00000345907.4:p.His94Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.329C>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His94Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-52034568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034568
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034568
    reference: chr 19
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.428C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.273C>T
  hgvsp: ENST00000346477.3:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.320C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.273C>T
  hgvsp: ENST00000359982.4:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.165C>T
  hgvsp: ENST00000436458.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.273C>T
  hgvsp: ENST00000391797.3:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.273C>T
  hgvsp: ENST00000343300.4:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.273C>T
  hgvsp: ENST00000425629.3:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41505
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly91Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-52034568-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034568
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034567
    reference: chr 19
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.272delG
  hgvsp: ENSP00000345907.4:p.Gly91AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.319delG
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.272delG
  hgvsp: ENSP00000375674.3:p.Gly91AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.272delG
  hgvsp: ENSP00000353071.4:p.Gly91AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.164delG
  hgvsp: ENSP00000410679.1:p.Gly55AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.272delG
  hgvsp: ENSP00000344064.4:p.Gly91AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.272delG
  hgvsp: ENSP00000401502.2:p.Gly91AlafsTer16
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.427delG
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly91AlafsTer16
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: GC
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS

http://identifiers.org/exac.variant/19-52034572-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034572
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034572
    reference: chr 19
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.269G>T
  hgvsp: ENSP00000344064.4:p.Arg90Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.161G>T
  hgvsp: ENSP00000410679.1:p.Arg54Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.316G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.269G>T
  hgvsp: ENSP00000353071.4:p.Arg90Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.269G>T
  hgvsp: ENSP00000401502.2:p.Arg90Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.269G>T
  hgvsp: ENSP00000375674.3:p.Arg90Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.424G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.269G>T
  hgvsp: ENSP00000345907.4:p.Arg90Leu
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg90Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-52034572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034572
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034572
    reference: chr 19
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.269G>A
  hgvsp: ENSP00000353071.4:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.269G>A
  hgvsp: ENSP00000344064.4:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.269G>A
  hgvsp: ENSP00000375674.3:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.316G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.161G>A
  hgvsp: ENSP00000410679.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.269G>A
  hgvsp: ENSP00000401502.2:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.424G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.269G>A
  hgvsp: ENSP00000345907.4:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9099
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg90Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

19-52034576-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034576
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034576
    reference: chr 19
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.420A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.265A>G
  hgvsp: ENSP00000344064.4:p.Thr89Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.265A>G
  hgvsp: ENSP00000375674.3:p.Thr89Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.265A>G
  hgvsp: ENSP00000345907.4:p.Thr89Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.265A>G
  hgvsp: ENSP00000353071.4:p.Thr89Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.265A>G
  hgvsp: ENSP00000401502.2:p.Thr89Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.157A>G
  hgvsp: ENSP00000410679.1:p.Thr53Ala
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.312A>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41525
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr89Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-52034577-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034577
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034577
    reference: chr 19
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.264G>C
  hgvsp: ENSP00000401502.2:p.Glu88Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.264G>C
  hgvsp: ENSP00000375674.3:p.Glu88Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.264G>C
  hgvsp: ENSP00000344064.4:p.Glu88Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.264G>C
  hgvsp: ENSP00000345907.4:p.Glu88Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.264G>C
  hgvsp: ENSP00000353071.4:p.Glu88Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.156G>C
  hgvsp: ENSP00000410679.1:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.311G>C
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.419G>C
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu88Asp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52034586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034586
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034586
    reference: chr 19
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.147G>A
  hgvsp: ENST00000436458.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.255G>A
  hgvsp: ENST00000343300.4:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.255G>A
  hgvsp: ENST00000346477.3:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.302G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.255G>A
  hgvsp: ENST00000425629.3:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.255G>A
  hgvsp: ENST00000391797.3:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.255G>A
  hgvsp: ENST00000359982.4:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.410G>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val85Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

19-52034595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034595
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034595
    reference: chr 19
allele count: 2
allele frequency: 1.651718613217052e-5
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.246C>T
  hgvsp: ENST00000343300.4:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.401C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.138C>T
  hgvsp: ENST00000436458.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.246C>T
  hgvsp: ENST00000425629.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.246C>T
  hgvsp: ENST00000391797.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.246C>T
  hgvsp: ENST00000346477.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.293C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.246C>T
  hgvsp: ENST00000359982.4:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp82Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-52034596-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034596
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034596
    reference: chr 19
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.245A>T
  hgvsp: ENSP00000353071.4:p.Asp82Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.400A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.137A>T
  hgvsp: ENSP00000410679.1:p.Asp46Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.292A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.245A>T
  hgvsp: ENSP00000344064.4:p.Asp82Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.245A>T
  hgvsp: ENSP00000345907.4:p.Asp82Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.245A>T
  hgvsp: ENSP00000401502.2:p.Asp82Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.245A>T
  hgvsp: ENSP00000375674.3:p.Asp82Val
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41593
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp82Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

19-52034601-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034601
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034601
    reference: chr 19
allele count: 339
allele frequency: 2.799755537569581e-3
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.240C>T
  hgvsp: ENST00000359982.4:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.395C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.240C>T
  hgvsp: ENST00000346477.3:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.287C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.240C>T
  hgvsp: ENST00000425629.3:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.240C>T
  hgvsp: ENST00000391797.3:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.132C>T
  hgvsp: ENST00000436458.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.240C>T
  hgvsp: ENST00000343300.4:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 29946
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 9099
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp80Asp
num of homozygotes: 3
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-52034603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034603
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034603
    reference: chr 19
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.130G>A
  hgvsp: ENSP00000410679.1:p.Asp44Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.285G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.238G>A
  hgvsp: ENSP00000344064.4:p.Asp80Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.393G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.238G>A
  hgvsp: ENSP00000353071.4:p.Asp80Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.238G>A
  hgvsp: ENSP00000375674.3:p.Asp80Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.238G>A
  hgvsp: ENSP00000345907.4:p.Asp80Asn
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.238G>A
  hgvsp: ENSP00000401502.2:p.Asp80Asn
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp80Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-52034617-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034617
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034617
    reference: chr 19
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.224C>T
  hgvsp: ENSP00000345907.4:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.224C>T
  hgvsp: ENSP00000353071.4:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.116C>T
  hgvsp: ENSP00000410679.1:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.224C>T
  hgvsp: ENSP00000344064.4:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.271C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.224C>T
  hgvsp: ENSP00000375674.3:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.379C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.224C>T
  hgvsp: ENSP00000401502.2:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro75Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-52034618-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034618
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034618
    reference: chr 19
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.223C>A
  hgvsp: ENSP00000401502.2:p.Pro75Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.223C>A
  hgvsp: ENSP00000345907.4:p.Pro75Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.378C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.223C>A
  hgvsp: ENSP00000344064.4:p.Pro75Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.270C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.115C>A
  hgvsp: ENSP00000410679.1:p.Pro39Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.223C>A
  hgvsp: ENSP00000375674.3:p.Pro75Thr
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.223C>A
  hgvsp: ENSP00000353071.4:p.Pro75Thr
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro75Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-52034623-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034623
    reference: chr 19
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.218A>G
  hgvsp: ENSP00000353071.4:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.218A>G
  hgvsp: ENSP00000401502.2:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.218A>G
  hgvsp: ENSP00000375674.3:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.218A>G
  hgvsp: ENSP00000344064.4:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.265A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.110A>G
  hgvsp: ENSP00000410679.1:p.Asp37Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.218A>G
  hgvsp: ENSP00000345907.4:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.373A>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp73Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

19-52034628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034628
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034628
    reference: chr 19
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.260G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.105G>A
  hgvsp: ENST00000436458.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.213G>A
  hgvsp: ENST00000359982.4:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.213G>A
  hgvsp: ENST00000391797.3:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.213G>A
  hgvsp: ENST00000343300.4:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.368G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.213G>A
  hgvsp: ENST00000346477.3:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.213G>A
  hgvsp: ENST00000425629.3:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly71Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-52034636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034636
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034636
    reference: chr 19
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.205C>T
  hgvsp: ENST00000425629.3:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.360C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.205C>T
  hgvsp: ENST00000359982.4:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.205C>T
  hgvsp: ENST00000343300.4:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.97C>T
  hgvsp: ENST00000436458.1:c.97C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.252C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.205C>T
  hgvsp: ENST00000391797.3:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.205C>T
  hgvsp: ENST00000346477.3:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu69Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-52034637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034637
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034637
    reference: chr 19
allele count: 4
allele frequency: 3.306440946964687e-5
allele num: 120976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.251C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.204C>T
  hgvsp: ENST00000391797.3:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.204C>T
  hgvsp: ENST00000346477.3:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.96C>T
  hgvsp: ENST00000436458.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.204C>T
  hgvsp: ENST00000359982.4:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.204C>T
  hgvsp: ENST00000425629.3:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.359C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.204C>T
  hgvsp: ENST00000343300.4:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe68Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/19-52034640-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034640
    reference: chr 19
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.93G>T
  hgvsp: ENSP00000410679.1:p.Trp31Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.201G>T
  hgvsp: ENSP00000345907.4:p.Trp67Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.248G>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.201G>T
  hgvsp: ENSP00000401502.2:p.Trp67Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.201G>T
  hgvsp: ENSP00000353071.4:p.Trp67Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.201G>T
  hgvsp: ENSP00000344064.4:p.Trp67Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.201G>T
  hgvsp: ENSP00000375674.3:p.Trp67Cys
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.356G>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Trp67Cys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-52034642-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034642
    reference: chr 19
allele count: 2
allele frequency: 1.654423929587718e-5
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.199T>A
  hgvsp: ENSP00000345907.4:p.Trp67Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.199T>A
  hgvsp: ENSP00000353071.4:p.Trp67Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.246T>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.199T>A
  hgvsp: ENSP00000344064.4:p.Trp67Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.91T>A
  hgvsp: ENSP00000410679.1:p.Trp31Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.199T>A
  hgvsp: ENSP00000401502.2:p.Trp67Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.199T>A
  hgvsp: ENSP00000375674.3:p.Trp67Arg
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.354T>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp67Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

19-52034643-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034643
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034643
    reference: chr 19
allele count: 96
allele frequency: 8.106875643905488e-4
allele num: 118418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.245C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.90C>A
  hgvsp: ENSP00000410679.1:p.Tyr30Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.198C>A
  hgvsp: ENSP00000375674.3:p.Tyr66Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.198C>A
  hgvsp: ENSP00000345907.4:p.Tyr66Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.353C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.198C>A
  hgvsp: ENSP00000401502.2:p.Tyr66Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.198C>A
  hgvsp: ENSP00000344064.4:p.Tyr66Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.198C>A
  hgvsp: ENSP00000353071.4:p.Tyr66Ter
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30151
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 15289
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 3.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.25e1
  variant carriers: 2
hgvs: p.Tyr66Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

19-52034662-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034662
    reference: chr 19
allele count: 4
allele frequency: 3.305293427424019e-5
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.179C>T
  hgvsp: ENSP00000344064.4:p.Ser60Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.226C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.179C>T
  hgvsp: ENSP00000401502.2:p.Ser60Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.179C>T
  hgvsp: ENSP00000375674.3:p.Ser60Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.334C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.179C>T
  hgvsp: ENSP00000353071.4:p.Ser60Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.71C>T
  hgvsp: ENSP00000410679.1:p.Ser24Leu
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.179C>T
  hgvsp: ENSP00000345907.4:p.Ser60Leu
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser60Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-52034662-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034662
    reference: chr 19
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.179C>G
  hgvsp: ENSP00000353071.4:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.334C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.179C>G
  hgvsp: ENSP00000344064.4:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.179C>G
  hgvsp: ENSP00000345907.4:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.71C>G
  hgvsp: ENSP00000410679.1:p.Ser24Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.179C>G
  hgvsp: ENSP00000375674.3:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.226C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.179C>G
  hgvsp: ENSP00000401502.2:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42814
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser60Trp
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-52034672-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034672
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034672
    reference: chr 19
allele count: 27
allele frequency: 2.231220560284274e-4
allele num: 121010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.169C>G
  hgvsp: ENSP00000344064.4:p.Leu57Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.169C>G
  hgvsp: ENSP00000353071.4:p.Leu57Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.169C>G
  hgvsp: ENSP00000375674.3:p.Leu57Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-7C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.169C>G
  hgvsp: ENSP00000401502.2:p.Leu57Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-7C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.169C>G
  hgvsp: ENSP00000345907.4:p.Leu57Val
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.324C>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2637
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9179
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu57Val
num of homozygotes: 1
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

19-52034672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034672
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034672
    reference: chr 19
allele count: 1
allele frequency: 8.263779852904718e-6
allele num: 121010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.169C>T
  hgvsp: ENSP00000344064.4:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.324C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.169C>T
  hgvsp: ENSP00000353071.4:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.169C>T
  hgvsp: ENSP00000345907.4:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.169C>T
  hgvsp: ENSP00000375674.3:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-7C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.169C>T
  hgvsp: ENSP00000401502.2:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-7C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42826
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu57Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-52034673-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034673
    reference: chr 19
allele count: 5
allele frequency: 4.131753350851967e-5
allele num: 121014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-8C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.168C>G
  hgvsp: ENST00000343300.4:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.168C>G
  hgvsp: ENST00000346477.3:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.168C>G
  hgvsp: ENST00000425629.3:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.168C>G
  hgvsp: ENST00000391797.3:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.168C>G
  hgvsp: ENST00000359982.4:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.323C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-8C>G
  variant of: http://identifiers.org/hgnc/10875
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42840
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
hgvs: c.68-8C>G
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

19-52034681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034681
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034681
    reference: chr 19
allele count: 2
allele frequency: 1.653247805313538e-5
allele num: 120974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.160C>T
  hgvsp: ENSP00000375674.3:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-16C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-16C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.160C>T
  hgvsp: ENSP00000401502.2:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.315C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.160C>T
  hgvsp: ENSP00000344064.4:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.160C>T
  hgvsp: ENSP00000353071.4:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.160C>T
  hgvsp: ENSP00000345907.4:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro54Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-52034683-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034683
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034683
    reference: chr 19
allele count: 1
allele frequency: 8.265829062654984e-6
allele num: 120980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.158T>G
  hgvsp: ENSP00000345907.4:p.Leu53Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.158T>G
  hgvsp: ENSP00000401502.2:p.Leu53Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-18T>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.158T>G
  hgvsp: ENSP00000344064.4:p.Leu53Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.158T>G
  hgvsp: ENSP00000353071.4:p.Leu53Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-18T>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.158T>G
  hgvsp: ENSP00000375674.3:p.Leu53Trp
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.313T>G
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu53Trp
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-52034685-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034685
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034685
    reference: chr 19
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-20A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.156A>T
  hgvsp: ENSP00000375674.3:p.Arg52Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.156A>T
  hgvsp: ENSP00000345907.4:p.Arg52Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.156A>T
  hgvsp: ENSP00000353071.4:p.Arg52Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.311A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.156A>T
  hgvsp: ENSP00000344064.4:p.Arg52Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-20A>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.156A>T
  hgvsp: ENSP00000401502.2:p.Arg52Ser
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg52Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

19-52034685-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034685
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034685
    reference: chr 19
allele count: 284
allele frequency: 2.347767141180166e-3
allele num: 120966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.156A>G
  hgvsp: ENST00000359982.4:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-20A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.156A>G
  hgvsp: ENST00000391797.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.156A>G
  hgvsp: ENST00000346477.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.311A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-20A>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.156A>G
  hgvsp: ENST00000425629.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.156A>G
  hgvsp: ENST00000343300.4:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 31303
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15410
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg52Arg
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

19-52034688-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034688
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034688
    reference: chr 19
allele count: 4
allele frequency: 3.30698766493601e-5
allele num: 120956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.153C>A
  hgvsp: ENSP00000375674.3:p.Cys51Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.153C>A
  hgvsp: ENSP00000345907.4:p.Cys51Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.153C>A
  hgvsp: ENSP00000401502.2:p.Cys51Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-23C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.153C>A
  hgvsp: ENSP00000353071.4:p.Cys51Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.308C>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.153C>A
  hgvsp: ENSP00000344064.4:p.Cys51Ter
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-23C>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 42934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys51Ter
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-52034691-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034691
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034691
    reference: chr 19
allele count: 4
allele frequency: 3.307097030226867e-5
allele num: 120952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.150C>G
  hgvsp: ENST00000346477.3:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.150C>G
  hgvsp: ENST00000359982.4:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.150C>G
  hgvsp: ENST00000425629.3:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.305C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-26C>G
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.150C>G
  hgvsp: ENST00000391797.3:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.150C>G
  hgvsp: ENST00000343300.4:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro50Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

19-52034693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034693
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034693
    reference: chr 19
allele count: 5
allele frequency: 4.134554956504482e-5
allele num: 120932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-28C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.148C>T
  hgvsp: ENSP00000401502.2:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.148C>T
  hgvsp: ENSP00000375674.3:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.148C>T
  hgvsp: ENSP00000345907.4:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.148C>T
  hgvsp: ENSP00000353071.4:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-28C>T
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.148C>T
  hgvsp: ENSP00000344064.4:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.303C>T
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro50Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

19-52034696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52034696
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 52034696
    reference: chr 19
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000344064
  ensembl transcript: ENST00000346477
  gene symbol: SIGLEC6
  hgvsc: ENST00000346477.3:c.145G>A
  hgvsp: ENSP00000344064.4:p.Val49Ile
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000375674
  ensembl transcript: ENST00000391797
  gene symbol: SIGLEC6
  hgvsc: ENST00000391797.3:c.145G>A
  hgvsp: ENSP00000375674.3:p.Val49Ile
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000410679
  ensembl transcript: ENST00000436458
  gene symbol: SIGLEC6
  hgvsc: ENST00000436458.1:c.68-31G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000401502
  ensembl transcript: ENST00000425629
  gene symbol: SIGLEC6
  hgvsc: ENST00000425629.3:c.145G>A
  hgvsp: ENSP00000401502.2:p.Val49Ile
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000353071
  ensembl transcript: ENST00000359982
  gene symbol: SIGLEC6
  hgvsc: ENST00000359982.4:c.145G>A
  hgvsp: ENSP00000353071.4:p.Val49Ile
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000489837
  gene symbol: SIGLEC6
  hgvsc: ENST00000489837.1:n.300G>A
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105492
  ensembl protein: ENSP00000345907
  ensembl transcript: ENST00000343300
  gene symbol: SIGLEC6
  hgvsc: ENST00000343300.4:c.145G>A
  hgvsp: ENSP00000345907.4:p.Val49Ile
  variant of: http://identifiers.org/hgnc/10875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105492
  ensembl transcript: ENST00000496422
  gene symbol: SIGLEC6
  hgvsc: ENST00000496422.1:n.223-31G>A
  variant of: http://identifiers.org/hgnc/10875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val49Ile
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 5847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17933
bin: 9.75e1
variant carriers: 160

GenotypeQuality
all individuals: 568
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 348
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 887
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.371393600279769e-4
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.291484475762056e-5
allele num: 63578
num of homozygotes: 0

African
type: Population
allele count: 151
allele frequency: 1.58380532829872e-2
allele num: 9534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

DP
type: SiteQuality
SIO_000300: 2.765052e6

GenotypeQuality
all individuals: 196
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2263
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17789
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.049979000419992e-4
allele num: 9524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.888e0

QD
type: SiteQuality
SIO_000300: 1.159e1

DP
type: SiteQuality
SIO_000300: 2.755619e6

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 1.578e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.3e-1

FS
type: SiteQuality
SIO_000300: 7.99e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

DP
type: SiteQuality
SIO_000300: 2.753472e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.82e-1

GenotypeQuality
all individuals: 302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17752
bin: 9.75e1
variant carriers: 599

GenotypeQuality
all individuals: 24229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 3
allele frequency: 3.778337531486146e-3
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 399
allele frequency: 4.727488151658768e-2
allele num: 8440
num of homozygotes: 12

Latino
type: Population
allele count: 198
allele frequency: 1.731071865710788e-2
allele num: 11438
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.877985756601752e-5
allele num: 63468
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.333902282910177e-4
allele num: 9374
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.056635672020287e-4
allele num: 9464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e0

FS
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.292e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.718e0

DP
type: SiteQuality
SIO_000300: 2.77287e6

GenotypeQuality
all individuals: 24498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17734
bin: 9.75e1
variant carriers: 57

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.311188811188811e-3
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.052853232259423e-4
allele num: 9498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.448771587656108e-4
allele num: 63578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.767967e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

GenotypeQuality
all individuals: 660
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 476
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 24294
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 3.75e1
variant carriers: 5

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 17538
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1621
bin: 7.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.70184361093452e-4
allele num: 62920
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.712698758440427e-4
allele num: 9182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.840490797546012e-3
allele num: 6520
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.551020408163265e-3
allele num: 784
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.825e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.86e-1

QD
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 8.697e1

VQSLOD
type: SiteQuality
SIO_000300: -3.63e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.528e0

DP
type: SiteQuality
SIO_000300: 2.757006e6

GenotypeQuality
all individuals: 476
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589319771137953e-5
allele num: 62920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -3.63e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.528e0

FS
type: SiteQuality
SIO_000300: 8.697e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.86e-1

DP
type: SiteQuality
SIO_000300: 2.757006e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.825e1

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 2053
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1696
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variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.142480045251712e-5
allele num: 63644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.573e0

DP
type: SiteQuality
SIO_000300: 2.758041e6

VQSLOD
type: SiteQuality
SIO_000300: -2.003e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.318e1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 420
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variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 286
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182592242194891e-4
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

DP
type: SiteQuality
SIO_000300: 2.760889e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.112e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.413e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

GenotypeQuality
all individuals: 1718
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 377
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 151
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5972
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variant carriers: 0

GenotypeQuality
all individuals: 25444
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variant carriers: 0

GenotypeQuality
all individuals: 17630
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.039284971939306e-4
allele num: 9622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 3.763e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.58e-1

QD
type: SiteQuality
SIO_000300: 1.073e1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e-1

DP
type: SiteQuality
SIO_000300: 2.766828e6

GenotypeQuality
all individuals: 349
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
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variant carriers: 0

GenotypeQuality
all individuals: 414
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GenotypeQuality
all individuals: 291
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GenotypeQuality
all individuals: 1613
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GenotypeQuality
all individuals: 870
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 16
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563966218329684e-5
allele num: 63940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.72e-1

FS
type: SiteQuality
SIO_000300: 3.131e0

DP
type: SiteQuality
SIO_000300: 2.768665e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.59e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.197e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 4.562e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

DP
type: SiteQuality
SIO_000300: 2.777999e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 76

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.034126163391934e-4
allele num: 9670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 72
allele frequency: 1.118672508623101e-3
allele num: 64362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10478
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.611420612813371e-4
allele num: 11488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.59e0

DP
type: SiteQuality
SIO_000300: 2.786964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.69e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 351
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GenotypeQuality
all individuals: 50
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.030927835051546e-4
allele num: 9700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 5.202e0

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e0

QD
type: SiteQuality
SIO_000300: 1.48e1

DP
type: SiteQuality
SIO_000300: 2.794177e6

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 379
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GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64764
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.073e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.42e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 2.798796e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 1.0072e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.421e1

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 353
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.17948717948718e-4
allele num: 9750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

DP
type: SiteQuality
SIO_000300: 2.80902e6

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533177971298908e-5
allele num: 65224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.319e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e0

FS
type: SiteQuality
SIO_000300: 8.053000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

QD
type: SiteQuality
SIO_000300: 3.349e1

DP
type: SiteQuality
SIO_000300: 2.814295e6

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2797
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 27490
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65290
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.768e0

DP
type: SiteQuality
SIO_000300: 2.816774e6

VQSLOD
type: SiteQuality
SIO_000300: 5.99e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.512e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1693
bin: 7.75e1
variant carriers: 18

GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 52
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variant carriers: 18

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 26

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 21

GenotypeQuality
all individuals: 293
bin: 9.25e1
variant carriers: 15

GenotypeQuality
all individuals: 5951
bin: 6.75e1
variant carriers: 21

GenotypeQuality
all individuals: 20157
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variant carriers: 15556

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 285
bin: 8.75e1
variant carriers: 25

South Asian
type: Population
allele count: 2554
allele frequency: 1.813405282590173e-1
allele num: 14084
num of homozygotes: 188

African
type: Population
allele count: 998
allele frequency: 1.016914611779091e-1
allele num: 9814
num of homozygotes: 46

European (Finnish)
type: Population
allele count: 481
allele frequency: 7.276853252647504e-2
allele num: 6610
num of homozygotes: 13

East Asian
type: Population
allele count: 921
allele frequency: 1.067949907235621e-1
allele num: 8624
num of homozygotes: 56

Latino
type: Population
allele count: 1320
allele frequency: 1.142857142857143e-1
allele num: 11550
num of homozygotes: 89

Other
type: Population
allele count: 122
allele frequency: 1.399082568807339e-1
allele num: 872
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 10627
allele frequency: 1.615045592705167e-1
allele num: 65800
num of homozygotes: 869

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.525e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

QD
type: SiteQuality
SIO_000300: 1.537e1

DP
type: SiteQuality
SIO_000300: 3.505462e6

GenotypeQuality
all individuals: 1731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 250
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2300
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GenotypeQuality
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GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 396
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variant carriers: 0

GenotypeQuality
all individuals: 8167
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517957436473481e-5
allele num: 65878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 7.735e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.22e0

DP
type: SiteQuality
SIO_000300: 1.966203e6

QD
type: SiteQuality
SIO_000300: 1.482e1

VQSLOD
type: SiteQuality
SIO_000300: -5.274e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1100
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GenotypeQuality
all individuals: 234
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.017915309446254e-4
allele num: 9824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.374e0

DP
type: SiteQuality
SIO_000300: 1.971343e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.326e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.388e0

FS
type: SiteQuality
SIO_000300: 5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.483e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
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GenotypeQuality
all individuals: 1099
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GenotypeQuality
all individuals: 196
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GenotypeQuality
all individuals: 5894
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variant carriers: 1

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14934
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

VQSLOD
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.053e1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.977399e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 2299
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 1.979134e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 1.346e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

GenotypeQuality
all individuals: 927
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018230109863576e-5
allele num: 66264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.277e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.113e0

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.98378e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5888
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.351626016260163e-5
allele num: 15744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.069e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.119e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 7.426e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.25e1

MQ
type: SiteQuality
SIO_000300: 5.904e1

DP
type: SiteQuality
SIO_000300: 1.990655e6

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.010157165609881e-5
allele num: 66554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.243e1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.579e0

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

FS
type: SiteQuality
SIO_000300: 7.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 1.99843e6

GenotypeQuality
all individuals: 8393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38705
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6341
bin: 9.75e1
variant carriers: 3413

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 406
allele frequency: 4.69364161849711e-2
allele num: 8650
num of homozygotes: 12

Other
type: Population
allele count: 30
allele frequency: 3.325942350332594e-2
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 50
allele frequency: 5.05356781888013e-3
allele num: 9894
num of homozygotes: 0

Latino
type: Population
allele count: 393
allele frequency: 3.39436863016065e-2
allele num: 11578
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 2158
allele frequency: 3.239267487241069e-2
allele num: 66620
num of homozygotes: 39

European (Finnish)
type: Population
allele count: 140
allele frequency: 2.117362371445856e-2
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 300
allele frequency: 1.836210062431142e-2
allele num: 16338
num of homozygotes: 5

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 1.103e0

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 2.085364e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

GenotypeQuality
all individuals: 1204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40723
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8928
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 74
allele frequency: 7.470220068645265e-3
allele num: 9906
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.112469437652811e-5
allele num: 16360
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.318535152876144e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.488e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

DP
type: SiteQuality
SIO_000300: 1.779626e6

GenotypeQuality
all individuals: 2604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40723
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.503226387346559e-5
allele num: 66638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.537205081669691e-4
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

DP
type: SiteQuality
SIO_000300: 1.779626e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.488e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.04e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8962
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 456
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.016287954956767e-4
allele num: 9946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.567e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.773828e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.69e-1

MQ
type: SiteQuality
SIO_000300: 6.03e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

FS
type: SiteQuality
SIO_000300: 1.724e0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

GenotypeQuality
all individuals: 2484
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2618
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

DP
type: SiteQuality
SIO_000300: 1.774197e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

FS
type: SiteQuality
SIO_000300: 1.315e0

MQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40992
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21447656060238e-4
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.072e0

DP
type: SiteQuality
SIO_000300: 1.774578e6

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.306e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.439e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 5.654e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.049e0

DP
type: SiteQuality
SIO_000300: 1.775489e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1027

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 106
allele frequency: 6.427358719379093e-3
allele num: 16492
num of homozygotes: 1

Other
type: Population
allele count: 5
allele frequency: 5.530973451327434e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 56
allele frequency: 4.836759371221282e-3
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 48
allele frequency: 7.25733293014817e-3
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.995609658750748e-3
allele num: 10022
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 805
allele frequency: 1.206896551724138e-2
allele num: 66700
num of homozygotes: 9

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.46e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 1.79681e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.98e0

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
all individuals: 2657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 167
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 2358
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 1.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.993e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

DP
type: SiteQuality
SIO_000300: 1.716157e6

GenotypeQuality
all individuals: 429
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2358
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

MQRankSum
type: SiteQuality
SIO_000300: 8.1e-2

FS
type: SiteQuality
SIO_000300: 1.3377e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

DP
type: SiteQuality
SIO_000300: 1.716555e6

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 9108
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

DP
type: SiteQuality
SIO_000300: 1.716602e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.511e0

FS
type: SiteQuality
SIO_000300: 3.496e0

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.199e0

QD
type: SiteQuality
SIO_000300: 1.023e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 458
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variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 41584
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 1210
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.117e1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.716706e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.013e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.2885e1

QD
type: SiteQuality
SIO_000300: 1.167e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.716981e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
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GenotypeQuality
all individuals: 41505
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.167e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

MQ
type: SiteQuality
SIO_000300: 6.013e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

DP
type: SiteQuality
SIO_000300: 1.716981e6

FS
type: SiteQuality
SIO_000300: 1.2885e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
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variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41462
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9099
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.717122e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41462
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.717122e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.71696e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

QD
type: SiteQuality
SIO_000300: 1.483e1

GenotypeQuality
all individuals: 2349
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 9106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41525
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

VQSLOD
type: SiteQuality
SIO_000300: -4.475e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 8.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.71698e6

QD
type: SiteQuality
SIO_000300: 1.241e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9096
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

FS
type: SiteQuality
SIO_000300: 1.388e0

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.108e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.717239e6

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.717309e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.369e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.299e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 1.359e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.343e0

DP
type: SiteQuality
SIO_000300: 1.717201e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41557
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 9.75e1
variant carriers: 336

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.921099466086612e-4
allele num: 10114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 136
allele frequency: 8.236434108527133e-3
allele num: 16512
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 167
allele frequency: 2.503447862325358e-3
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.073255010366275e-3
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

QD
type: SiteQuality
SIO_000300: 1.325e1

DP
type: SiteQuality
SIO_000300: 1.720164e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
all individuals: 1210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.704607e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.57e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.889240506329114e-5
allele num: 10112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.116e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.337e0

DP
type: SiteQuality
SIO_000300: 1.702465e6

QD
type: SiteQuality
SIO_000300: 1.036e1

MQ
type: SiteQuality
SIO_000300: 5.807e1

MQRankSum
type: SiteQuality
SIO_000300: 7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.665e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.382e0

QD
type: SiteQuality
SIO_000300: 6.6e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 9.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.079e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

DP
type: SiteQuality
SIO_000300: 1.702257e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2505
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variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.70113e6

QD
type: SiteQuality
SIO_000300: 1.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.3e-1

FS
type: SiteQuality
SIO_000300: 2.921e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

FS
type: SiteQuality
SIO_000300: 3.717e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 1.700177e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.46e1

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.071e-1

FS
type: SiteQuality
SIO_000300: 1.615e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.823e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.697542e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 1.367e1

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 5.045e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.697596e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

QD
type: SiteQuality
SIO_000300: 1.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.93e-1

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 123
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GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

FS
type: SiteQuality
SIO_000300: 5.719e0

QD
type: SiteQuality
SIO_000300: 1.569e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.983e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.764e0

DP
type: SiteQuality
SIO_000300: 1.697379e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 2068
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 451
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.697738e6

FS
type: SiteQuality
SIO_000300: 8.869e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

QD
type: SiteQuality
SIO_000300: 9.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

GenotypeQuality
all individuals: 1422
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 12

GenotypeQuality
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bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 959
bin: 2.5e0
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GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 195
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GenotypeQuality
all individuals: 365
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variant carriers: 3

GenotypeQuality
all individuals: 177
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1067
bin: 8.25e1
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GenotypeQuality
all individuals: 2545
bin: 7.25e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 21
allele frequency: 3.386004514672686e-3
allele num: 6202
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.340276152586005e-4
allele num: 8546
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.262360614348832e-3
allele num: 9506
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737619461337967e-4
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.293577981651376e-3
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.578957043936516e-4
allele num: 65276
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.709e1

DP
type: SiteQuality
SIO_000300: 1.711206e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.047e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.923e0

FS
type: SiteQuality
SIO_000300: 1.17617e2

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 373
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 1464
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GenotypeQuality
all individuals: 42814
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GenotypeQuality
all individuals: 9192
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.023e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
SIO_000300: 1.671989e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e0

FS
type: SiteQuality
SIO_000300: 2.486e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 377
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GenotypeQuality
all individuals: 2640
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.671989e6

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 2.486e0

QD
type: SiteQuality
SIO_000300: 1.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.023e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 26

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
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GenotypeQuality
all individuals: 372
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 3.122109158186864e-3
allele num: 8648
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

DP
type: SiteQuality
SIO_000300: 1.671321e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 1.831e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.874e0

QD
type: SiteQuality
SIO_000300: 1.301e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

FS
type: SiteQuality
SIO_000300: 1.831e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

QD
type: SiteQuality
SIO_000300: 1.301e1

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

DP
type: SiteQuality
SIO_000300: 1.671321e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.874e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.780346820809249e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.138e0

VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.669771e6

QD
type: SiteQuality
SIO_000300: 9.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.52e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.85e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

FS
type: SiteQuality
SIO_000300: 2.825e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

DP
type: SiteQuality
SIO_000300: 1.668987e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
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Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
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DP
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.98003992015968e-5
allele num: 10020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.315e1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.36e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 243
allele frequency: 3.642086330935252e-3
allele num: 66720
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
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African
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allele frequency: 3.992015968063872e-4
allele num: 10020
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.244482173174873e-4
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.901140684410646e-3
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.530973451327434e-3
allele num: 904
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DP
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9205
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99538355466291e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 6.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.658e6

FS
type: SiteQuality
SIO_000300: 2.495e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.298e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99538355466291e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.284e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.657532e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42843
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494903465643362e-5
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.119e0

DP
type: SiteQuality
SIO_000300: 1.656786e6

FS
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e-1