20-2730413-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730413
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730413
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 11990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.948+14G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.879+14G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.879+14G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.963+14G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.891+14G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+249G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26500
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24903
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

20-2730414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730414
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730414
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 12008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.963+15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.879+15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.879+15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+250C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.948+15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.891+15C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25262
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4842
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/20-2730415-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730415
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730415
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 11980
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.879+16C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.948+16C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.963+16C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.879+16C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+251C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.891+16C>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26858
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25236
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

20-2730437-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730437
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730437
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 11944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.963+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.879+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+273G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.879+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.948+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.891+38G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

20-2730455-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730455
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730455
    reference: chr 20
allele count: 3
allele frequency: 2.496671105193076e-4
allele num: 12016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+291C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.949-38C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.880-38C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.880-38C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.892-38C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.964-38C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23729
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

20-2730475-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730475
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730475
    reference: chr 20
allele count: 1
allele frequency: 7.275902211874272e-5
allele num: 13744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.964-18T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.880-18T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.949-18T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+311T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.892-18T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.880-18T>C
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3721
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22068
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS

20-2730476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730476
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730476
    reference: chr 20
allele count: 1
allele frequency: 7.221259387637204e-5
allele num: 13848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.892-17C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.949-17C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.964-17C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.880-17C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.880-17C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+312C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25797
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22407
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-2730485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730485
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730485
    reference: chr 20
allele count: 47
allele frequency: 3.238252721510266e-3
allele num: 14514
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.949-8C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.880-8C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.964-8C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.892-8C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.880-8C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+321C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 25741
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.25e1
  variant carriers: 2
hgvs: c.880-8C>T
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

20-2730512-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730512
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730512
    reference: chr 20
allele count: 2
allele frequency: 1.15473441108545e-4
allele num: 17320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.899T>C
  hgvsp: ENSP00000405003.3:p.Ile300Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.911T>C
  hgvsp: ENSP00000477023.1:p.Ile304Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.899T>C
  hgvsp: ENSP00000370022.4:p.Ile300Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+348T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.983T>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.968T>C
  hgvsp: ENSP00000345030.5:p.Ile323Thr
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile300Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

20-2730582-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730582
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730582
    reference: chr 20
allele count: 1
allele frequency: 5.216484089723526e-5
allele num: 19170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.981G>C
  hgvsp: ENSP00000477023.1:p.Gln327His
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1038G>C
  hgvsp: ENSP00000345030.5:p.Gln346His
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1053G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+418G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.969G>C
  hgvsp: ENSP00000370022.4:p.Gln323His
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.969G>C
  hgvsp: ENSP00000405003.3:p.Gln323His
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln323His
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

20-2730587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730587
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730587
    reference: chr 20
allele count: 10
allele frequency: 5.262603936427745e-4
allele num: 19002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.974G>A
  hgvsp: ENSP00000405003.3:p.Cys325Tyr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1043G>A
  hgvsp: ENSP00000345030.5:p.Cys348Tyr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.986G>A
  hgvsp: ENSP00000477023.1:p.Cys329Tyr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+423G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1058G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.974G>A
  hgvsp: ENSP00000370022.4:p.Cys325Tyr
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys325Tyr
num of homozygotes: 1
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-2730634-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730634
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730634
    reference: chr 20
allele count: 1
allele frequency: 6.845564074479737e-5
allele num: 14608
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1006+15G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1006+15G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1090+15G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1075+15G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+470G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1018+15G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

20-2730645-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730645
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730645
    reference: chr 20
allele count: 1
allele frequency: 7.304601899196493e-5
allele num: 13690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1006+26G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1018+26G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1006+26G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1090+26G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1075+26G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+481G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7155
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/20-2730656-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730656
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730656
    reference: chr 20
allele count: 1
allele frequency: 8.461668641056016e-5
allele num: 11818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1075+37C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1090+37C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+492C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1006+37C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1006+37C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1018+37C>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum

20-2730665-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730665
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730665
    reference: chr 20
allele count: 6
allele frequency: 5.365766410302271e-4
allele num: 11182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1090+46A>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1075+46A>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1006+46A>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+501A>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1018+46A>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1006+46A>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

20-2730669-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2730669
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2730669
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 10802
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1090+50C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1006+50C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+505C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1018+50C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1006+50C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1075+50C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4820
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

20-2732301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732301
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732301
    reference: chr 20
allele count: 2
allele frequency: 1.202935161794779e-4
allele num: 16626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2137G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1019-45G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1007-45G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1076-45G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1007-45G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1091-45G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

20-2732336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732336
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732336
    reference: chr 20
allele count: 1
allele frequency: 5.753077896674721e-5
allele num: 17382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2172C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1007-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1076-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1091-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1019-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1007-10C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3628
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-2732357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732357
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732357
    reference: chr 20
allele count: 1
allele frequency: 5.645252342779722e-5
allele num: 17714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1087C>T
  hgvsp: ENSP00000345030.5:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2193C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1018C>T
  hgvsp: ENSP00000405003.3:p.Pro340Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.21C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1102C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1030C>T
  hgvsp: ENSP00000477023.1:p.Pro344Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1018C>T
  hgvsp: ENSP00000370022.4:p.Pro340Ser
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4746
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro340Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

20-2732359-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732359
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732359
    reference: chr 20
allele count: 6
allele frequency: 3.373439784099854e-4
allele num: 17786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1020C>T
  hgvsp: ENST00000449079.3:c.1020C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1104C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1032C>T
  hgvsp: ENST00000609451.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1089C>T
  hgvsp: ENST00000342725.5:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.23C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1020C>T
  hgvsp: ENST00000380648.4:c.1020C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2195C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4964
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro340Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-2732363-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732363
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732363
    reference: chr 20
allele count: 1
allele frequency: 5.602240896358544e-5
allele num: 17850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1036A>G
  hgvsp: ENSP00000477023.1:p.Ile346Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1024A>G
  hgvsp: ENSP00000405003.3:p.Ile342Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1093A>G
  hgvsp: ENSP00000345030.5:p.Ile365Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1108A>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1024A>G
  hgvsp: ENSP00000370022.4:p.Ile342Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.27A>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2199A>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile342Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-2732419-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732419
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732419
    reference: chr 20
allele count: 5
allele frequency: 2.926372468687814e-4
allele num: 17086
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1080C>G
  hgvsp: ENST00000380648.4:c.1080C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1080C>G
  hgvsp: ENST00000449079.3:c.1080C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1149C>G
  hgvsp: ENST00000342725.5:c.1149C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.83C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1092C>G
  hgvsp: ENST00000609451.1:c.1092C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1164C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2255C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15293
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14091
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro360Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

20-2732426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732426
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732426
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 16844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1156C>T
  hgvsp: ENST00000342725.5:c.1156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2262C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1087C>T
  hgvsp: ENST00000449079.3:c.1087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1171C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.90C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1087C>T
  hgvsp: ENST00000380648.4:c.1087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1099C>T
  hgvsp: ENST00000609451.1:c.1099C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15653
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu363Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

20-2732443-A-AGGGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732448
    reference: chr 20
allele count: 5
allele frequency: 3.323142363418849e-4
allele num: 15046
alternate allele: AGGGGC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.98+25_98+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1179+25_1179+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1107+25_1107+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2295_367+2299dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1095+25_1095+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1095+25_1095+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1164+25_1164+29dupGGGGC
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 18213
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16585
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

20-2732443-AGGGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732438
    reference: chr 20
allele count: 42
allele frequency: 2.791439585271833e-3
allele num: 15046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.98+25_98+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1164+25_1164+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1095+25_1095+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1107+25_1107+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1179+25_1179+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1095+25_1095+29delGGGGC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2295_367+2299delGGGGC
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18213
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16585
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: AGGGGC
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

20-2732445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732445
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732445
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 13988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1164+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.98+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1095+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1095+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1179+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1107+11G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2281G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

20-2732471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732471
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732471
    reference: chr 20
allele count: 1
allele frequency: 7.41399762752076e-5
allele num: 13488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1164+37G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1179+37G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.98+37G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2307G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1095+37G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1107+37G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1095+37G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

20-2732530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732530
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732530
    reference: chr 20
allele count: 1
allele frequency: 7.830853563038371e-5
allele num: 12770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-38C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2366C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-38C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-38C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-38C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-38C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-38C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6761
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

20-2732532-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732532
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732532
    reference: chr 20
allele count: 1529
allele frequency: 1.1935987509758e-1
allele num: 12810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-36G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-36G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-36G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-36G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2368G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-36G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-36G>C
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 2.5e0
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 187
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 6.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.25e1
  variant carriers: 11
num of homozygotes: 93
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

20-2732532-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732532
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732532
    reference: chr 20
allele count: 1
allele frequency: 7.8064012490242e-5
allele num: 12810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-36G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-36G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-36G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-36G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-36G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2368G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-36G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-2732538-CCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732538
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732536
    reference: chr 20
allele count: 1
allele frequency: 7.816163826793809e-5
allele num: 12794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-29_99-28delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-29_1165-28delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-29_1180-28delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2375_367+2376delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-29_1108-28delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-29_1096-28delCG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-29_1096-28delCG
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CCG
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-2732539-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732539
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732539
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 12752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-29C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-29C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2375C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-29C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-29C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-29C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-29C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7947
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6432
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

20-2732540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732540
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732540
    reference: chr 20
allele count: 1
allele frequency: 7.819831091648421e-5
allele num: 12788
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-28G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-28G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2376G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-28G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-28G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-28G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-28G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6368
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

20-2732540-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732540
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732540
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 12788
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-28G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-28G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-28G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-28G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-28G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2376G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-28G>C
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

20-2732542-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732542
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732543
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 12812
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-26_1108-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-26_99-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-26_1165-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-26_1096-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-26_1180-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-26_1096-25insG
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2378_367+2379insG
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6427
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

20-2732544-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732544
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732544
    reference: chr 20
allele count: 2
allele frequency: 1.559089491736826e-4
allele num: 12828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-24C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-24C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2380C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-24C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-24C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-24C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-24C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

20-2732545-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732545
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732545
    reference: chr 20
allele count: 1
allele frequency: 7.823501799405414e-5
allele num: 12782
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-23G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-23G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-23G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-23G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-23G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2381G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-23G>C
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

20-2732558-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732558
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732557
    reference: chr 20
allele count: 3
allele frequency: 2.323420074349442e-4
allele num: 12912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1108-9delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2395delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.99-9delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1165-9delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1096-9delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1096-9delT
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1180-9delT
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: CT
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

20-2732584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732584
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732584
    reference: chr 20
allele count: 1
allele frequency: 7.78694907335306e-5
allele num: 12842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1196G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1112G>A
  hgvsp: ENSP00000370022.4:p.Arg371Gln
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2420G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.115G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1181G>A
  hgvsp: ENSP00000345030.5:p.Arg394Gln
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1124G>A
  hgvsp: ENSP00000477023.1:p.Arg375Gln
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1112G>A
  hgvsp: ENSP00000405003.3:p.Arg371Gln
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3971
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg371Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ

20-2732624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732624
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732624
    reference: chr 20
allele count: 3
allele frequency: 2.398081534772182e-4
allele num: 12510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1164C>T
  hgvsp: ENST00000609451.1:c.1164C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.155C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1221C>T
  hgvsp: ENST00000342725.5:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1236C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2460C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1152C>T
  hgvsp: ENST00000380648.4:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1152C>T
  hgvsp: ENST00000449079.3:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly384Gly
num of homozygotes: 1
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

20-2732661-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732661
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732661
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 10596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2497G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1161+28G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.192G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1161+28G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1230+28G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1273G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1173+28G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

20-2732671-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732671
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732671
    reference: chr 20
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1161+38G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1173+38G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1283G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1161+38G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.202G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2507G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1230+38G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

20-2732673-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732673
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732674
    reference: chr 20
allele count: 1
allele frequency: 1.044932079414838e-4
allele num: 9570
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1230+46dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1161+46dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.210dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1291dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1161+46dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2515dupC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1173+46dupC
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/20-2732678-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732678
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732678
    reference: chr 20
allele count: 335
allele frequency: 3.733006463115667e-2
allele num: 8974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1173+45C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1161+45C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1230+45C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2514C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1290C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1161+45C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.209C>A
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 2.25e1
  variant carriers: 2
num of homozygotes: 10
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/20-2732781-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732781
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732781
    reference: chr 20
allele count: 1
allele frequency: 1.486767766874814e-4
allele num: 6726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.312C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1280C>A
  hgvsp: ENSP00000345030.5:p.Thr427Asn
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1393C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1223C>A
  hgvsp: ENSP00000477023.1:p.Thr408Asn
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1211C>A
  hgvsp: ENSP00000405003.3:p.Thr404Asn
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1211C>A
  hgvsp: ENSP00000370022.4:p.Thr404Asn
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2617C>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr404Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

20-2732792-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732792
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732792
    reference: chr 20
allele count: 2
allele frequency: 2.471576866040534e-4
allele num: 8092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1222C>G
  hgvsp: ENSP00000405003.3:p.Pro408Ala
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1234C>G
  hgvsp: ENSP00000477023.1:p.Pro412Ala
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2628C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1404C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1222C>G
  hgvsp: ENSP00000370022.4:p.Pro408Ala
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1291C>G
  hgvsp: ENSP00000345030.5:p.Pro431Ala
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.323C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro408Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum

20-2732799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732799
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732799
    reference: chr 20
allele count: 4
allele frequency: 4.677268475210477e-4
allele num: 8552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1298C>T
  hgvsp: ENSP00000345030.5:p.Pro433Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2635C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1229C>T
  hgvsp: ENSP00000405003.3:p.Pro410Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.330C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1411C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1229C>T
  hgvsp: ENSP00000370022.4:p.Pro410Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1241C>T
  hgvsp: ENSP00000477023.1:p.Pro414Leu
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro410Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/20-2732807-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732807
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732807
    reference: chr 20
allele count: 1
allele frequency: 1.11781801922647e-4
allele num: 8946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1249C>A
  hgvsp: ENSP00000477023.1:p.Pro417Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.338C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1306C>A
  hgvsp: ENSP00000345030.5:p.Pro436Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1237C>A
  hgvsp: ENSP00000370022.4:p.Pro413Thr
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1419C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2643C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1237C>A
  hgvsp: ENSP00000405003.3:p.Pro413Thr
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro413Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

20-2732820-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732820
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732819
    reference: chr 20
allele count: 1
allele frequency: 1.079447322970639e-4
allele num: 9264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1434delC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2658delC
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1264delC
  hgvsp: ENSP00000477023.1:p.His422ThrfsTer125
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1321delC
  hgvsp: ENSP00000345030.5:p.His441ThrfsTer125
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1252delC
  hgvsp: ENSP00000370022.4:p.His418ThrfsTer125
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1252delC
  hgvsp: ENSP00000405003.3:p.His418ThrfsTer143
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.353delC
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His418ThrfsTer125
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

20-2732830-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732830
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732830
    reference: chr 20
allele count: 8
allele frequency: 8.548835221201111e-4
allele num: 9358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1260C>T
  hgvsp: ENST00000449079.3:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1272C>T
  hgvsp: ENST00000609451.1:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1260C>T
  hgvsp: ENST00000380648.4:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1442C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1329C>T
  hgvsp: ENST00000342725.5:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.361C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2666C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His420His
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

20-2732870-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732870
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732870
    reference: chr 20
allele count: 1
allele frequency: 1.292657704239917e-4
allele num: 7736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.401G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1369G>T
  hgvsp: ENSP00000345030.5:p.Ala457Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1300G>T
  hgvsp: ENSP00000405003.3:p.Ala434Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1482G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1300G>T
  hgvsp: ENSP00000370022.4:p.Ala434Ser
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2706G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1312G>T
  hgvsp: ENSP00000477023.1:p.Ala438Ser
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala434Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

20-2732882-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732882
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732882
    reference: chr 20
allele count: 1
allele frequency: 1.956181533646322e-4
allele num: 5112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1381G>C
  hgvsp: ENSP00000345030.5:p.Gly461Arg
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1324G>C
  hgvsp: ENSP00000477023.1:p.Gly442Arg
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.413G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2718G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1494G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1312G>C
  hgvsp: ENSP00000405003.3:p.Gly438Arg
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1312G>C
  hgvsp: ENSP00000370022.4:p.Gly438Arg
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly438Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS

20-2732902-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732902
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732902
    reference: chr 20
allele count: 316
allele frequency: 3.682983682983683e-1
allele num: 858
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1332C>G
  hgvsp: ENST00000380648.4:c.1332C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.433C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1344C>G
  hgvsp: ENST00000609451.1:c.1344C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1332C>G
  hgvsp: ENST00000449079.3:c.1332C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1401C>G
  hgvsp: ENST00000342725.5:c.1401C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2738C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1514C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 2.5e0
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 7.5e0
  variant carriers: 577
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 7.5e0
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 6.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.25e1
  variant carriers: 37
hgvs: p.Pro444Pro
num of homozygotes: 42
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

20-2732912-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732912
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732912
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 66
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1351+3G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1339+3G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1339+3G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1408+3G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1521+3G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2748G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.440+3G>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1339+3G>T
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

20-2732934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732934
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732934
    reference: chr 20
allele count: 2
allele frequency: 3.333333333333333e-1
allele num: 6
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.440+25G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1351+25G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1521+25G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2770G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1339+25G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1339+25G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1408+25G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.5e0
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 73
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

20-2732944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732944
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732944
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1351+35G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.440+35G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1339+35G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2780G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1339+35G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1521+35G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1408+35G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

20-2732951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2732951
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2732951
    reference: chr 20
allele count: 1
allele frequency: 5.0e-1
allele num: 2
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1339+42C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1521+42C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1339+42C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.440+42C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2787C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1351+42C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1408+42C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 4
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-2733056-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2733056
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2733056
    reference: chr 20
allele count: 1
allele frequency: 2.439024390243902e-3
allele num: 410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.494G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1575G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+2892G>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1405G>T
  hgvsp: ENSP00000477023.1:p.Gly469Cys
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1393G>T
  hgvsp: ENSP00000370022.4:p.Gly465Cys
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1462G>T
  hgvsp: ENSP00000345030.5:p.Gly488Cys
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1393G>T
  hgvsp: ENSP00000405003.3:p.Gly465Cys
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly465Cys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

20-2733229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2733229
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2733229
    reference: chr 20
allele count: 0
allele frequency: 0.0e0
allele num: 608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1528+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1540+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1528+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1710+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.367+3065G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.629+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1597+38G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.50+38G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3926
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

20-2736258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736258
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736258
    reference: chr 20
allele count: 2
allele frequency: 1.48434021077631e-4
allele num: 13474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-131C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4191C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-15C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.525C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18250
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

20-2736259-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736259
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736259
    reference: chr 20
allele count: 3
allele frequency: 2.33172703248873e-4
allele num: 12866
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-14G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-14G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-14G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.526G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-14G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-130G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4190G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-14G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-14G>C
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

20-2736259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736259
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736259
    reference: chr 20
allele count: 2
allele frequency: 1.55448468832582e-4
allele num: 12866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-14G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.526G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-130G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-14G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-14G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-14G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4190G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-14G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-14G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

20-2736263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736263
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736263
    reference: chr 20
allele count: 2
allele frequency: 1.404297149276787e-4
allele num: 14242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-126C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.530C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4186C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-10C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-10C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21767
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19521
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-2736264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736264
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736264
    reference: chr 20
allele count: 1
allele frequency: 7.927699381639449e-5
allele num: 12614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-9G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-9G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-9G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-125G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.531G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-9G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4185G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-9G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-9G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-2736264-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736264
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736264
    reference: chr 20
allele count: 3
allele frequency: 2.378309814491834e-4
allele num: 12614
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-125G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-9G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-9G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.531G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4185G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-9G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-9G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-9G>C
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-9G>C
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 21897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

20-2736268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736268
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736268
    reference: chr 20
allele count: 1
allele frequency: 6.611133148221606e-5
allele num: 15126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.51-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1598-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1541-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1529-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1711-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4181C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.630-5C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-121C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.535C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1529-5C>T
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/20-2736291-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736291
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736291
    reference: chr 20
allele count: 1
allele frequency: 5.990176111177669e-5
allele num: 16694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.69C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4158C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1547C>A
  hgvsp: ENSP00000370022.4:p.Pro516Gln
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.648C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1729C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.558C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1559C>A
  hgvsp: ENSP00000477023.1:p.Pro520Gln
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-98C>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1616C>A
  hgvsp: ENSP00000345030.5:p.Pro539Gln
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17278
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro516Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

20-2736291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736291
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736291
    reference: chr 20
allele count: 1
allele frequency: 5.990176111177669e-5
allele num: 16694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4158C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1616C>T
  hgvsp: ENSP00000345030.5:p.Pro539Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1547C>T
  hgvsp: ENSP00000370022.4:p.Pro516Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.69C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1729C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.648C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.558C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1559C>T
  hgvsp: ENSP00000477023.1:p.Pro520Leu
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-98C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19499
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro516Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

20-2736292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736292
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736292
    reference: chr 20
allele count: 1
allele frequency: 6.013952369497234e-5
allele num: 16628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.649G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1548G>A
  hgvsp: ENST00000380648.4:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.559G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.70G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-97G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1730G>A
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1617G>A
  hgvsp: ENST00000342725.5:c.1617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1560G>A
  hgvsp: ENST00000609451.1:c.1560G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4157G>A
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18977
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro516Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

20-2736293-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736293
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736293
    reference: chr 20
allele count: 1
allele frequency: 5.953089653530182e-5
allele num: 16798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.560C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1561C>G
  hgvsp: ENSP00000477023.1:p.Leu521Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4156C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.650C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-96C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.71C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1549C>G
  hgvsp: ENSP00000370022.4:p.Leu517Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1618C>G
  hgvsp: ENSP00000345030.5:p.Leu540Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1731C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu517Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

20-2736297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736297
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736297
    reference: chr 20
allele count: 2
allele frequency: 1.181055863942365e-4
allele num: 16934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.564C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1622C>T
  hgvsp: ENSP00000345030.5:p.Ala541Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4152C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.73+2C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1735C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1565C>T
  hgvsp: ENSP00000477023.1:p.Ala522Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.654C>T
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1553C>T
  hgvsp: ENSP00000370022.4:p.Ala518Val
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-92C>T
  variant of: http://identifiers.org/hgnc/29278
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
hgvs: n.73+2C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

20-2736303-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2736303
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 2736303
    reference: chr 20
allele count: 3
allele frequency: 1.723939777037122e-4
allele num: 17402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000609967
  gene symbol: EBF4
  hgvsc: ENST00000609967.1:n.1741C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000481662
  gene symbol: EBF4
  hgvsc: ENST00000481662.1:n.73+8C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000345030
  ensembl transcript: ENST00000342725
  gene symbol: EBF4
  hgvsc: ENST00000342725.5:c.1628C>G
  hgvsp: ENSP00000345030.5:p.Ala543Gly
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477023
  ensembl transcript: ENST00000609451
  gene symbol: EBF4
  hgvsc: ENST00000609451.1:c.1571C>G
  hgvsp: ENSP00000477023.1:p.Ala524Gly
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000370022
  ensembl transcript: ENST00000380648
  gene symbol: EBF4
  hgvsc: ENST00000380648.4:c.1559C>G
  hgvsp: ENSP00000370022.4:p.Ala520Gly
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000477287
  gene symbol: EBF4
  hgvsc: ENST00000477287.1:n.570C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000405003
  ensembl transcript: ENST00000449079
  gene symbol: EBF4
  hgvsc: ENST00000449079.3:c.1529-86C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088881
  ensembl protein: ENSP00000477107
  ensembl transcript: ENST00000463145
  gene symbol: EBF4
  hgvsc: ENST00000463145.2:c.368-4146C>G
  variant of: http://identifiers.org/hgnc/29278
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088881
  ensembl transcript: ENST00000491472
  gene symbol: EBF4
  hgvsc: ENST00000491472.2:n.660C>G
  variant of: http://identifiers.org/hgnc/29278
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala520Gly
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 27
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.173e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.003e0

FS
type: SiteQuality
SIO_000300: 7.501e0

DP
type: SiteQuality
SIO_000300: 2.0127e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 536
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4714
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.018e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.770000000000001e-2

DP
type: SiteQuality
SIO_000300: 2.01776e5

GenotypeQuality
all individuals: 336
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1268
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.770000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.316e1

DP
type: SiteQuality
SIO_000300: 2.01643e5

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25076
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1262
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 1.93e1

MQ
type: SiteQuality
SIO_000300: 5.456e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-2

DP
type: SiteQuality
SIO_000300: 2.01106e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 4.144218814753419e-4
allele num: 4826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.043318348998774e-4
allele num: 4894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.01e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.617e0

QD
type: SiteQuality
SIO_000300: 1.038e1

FS
type: SiteQuality
SIO_000300: 3.474e0

DP
type: SiteQuality
SIO_000300: 2.00771e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

GenotypeQuality
all individuals: 246
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.725923369002416e-4
allele num: 5794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.91e-2

DP
type: SiteQuality
SIO_000300: 2.15138e5

VQSLOD
type: SiteQuality
SIO_000300: -2.294e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.715854495538778e-4
allele num: 5828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.98e0

DP
type: SiteQuality
SIO_000300: 2.16346e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.870000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.508e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

GenotypeQuality
all individuals: 22719
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3113
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 455
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 46
allele frequency: 2.774427020506634e-2
allele num: 1658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6118
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.378378378378379e-3
allele num: 296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

DP
type: SiteQuality
SIO_000300: 2.25935e5

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.539999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

QD
type: SiteQuality
SIO_000300: 1.535e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22516
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.816793893129771e-3
allele num: 524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.451e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.72e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 2.6425e5

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

GenotypeQuality
all individuals: 178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2096
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.321702352630188e-4
allele num: 7566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.290000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.187e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

DP
type: SiteQuality
SIO_000300: 2.86322e5

QD
type: SiteQuality
SIO_000300: 8.31e0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1749
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20665
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.338688085676037e-3
allele num: 7470
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.804e0

DP
type: SiteQuality
SIO_000300: 2.8081e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.588e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.252e0

GenotypeQuality
all individuals: 763
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4840
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.154639175257732e-4
allele num: 1940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.385e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.54e-1

FS
type: SiteQuality
SIO_000300: 5.379e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.546e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.53e-2

DP
type: SiteQuality
SIO_000300: 1.77989e5

GenotypeQuality
all individuals: 66
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.339728591483388e-4
allele num: 4274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.56e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.64261e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeQuality
all individuals: 31
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.278688524590164e-4
allele num: 3050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.876e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

DP
type: SiteQuality
SIO_000300: 1.51521e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 69
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 258
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4192
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 3.714710252600297e-4
allele num: 2692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.939625260235947e-4
allele num: 5764
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.424657534246575e-3
allele num: 292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.320000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

QD
type: SiteQuality
SIO_000300: 1.362e1

DP
type: SiteQuality
SIO_000300: 1.4871e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.702e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.68e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.726e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.4969e5

MQ
type: SiteQuality
SIO_000300: 5.811e1

GenotypeQuality
all individuals: 2059
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1735
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.567394094993582e-4
allele num: 7790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.557e0

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

FS
type: SiteQuality
SIO_000300: 1.0045e1

DP
type: SiteQuality
SIO_000300: 2.71703e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

QD
type: SiteQuality
SIO_000300: 1.089e1

GenotypeQuality
all individuals: 2490
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.544502617801048e-4
allele num: 1528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 7.44e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 2.91295e5

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.85e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.305e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.329113924050633e-4
allele num: 1580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.985e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.51e-2

FS
type: SiteQuality
SIO_000300: 6.154e0

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

DP
type: SiteQuality
SIO_000300: 2.98818e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

GenotypeQuality
all individuals: 2582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 3.773584905660377e-3
allele num: 1590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.51e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

FS
type: SiteQuality
SIO_000300: 3.684e0

DP
type: SiteQuality
SIO_000300: 2.99949e5

VQSLOD
type: SiteQuality
SIO_000300: 2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.81e-1

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 559
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 6.273525721455458e-4
allele num: 1594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: -1.403e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.767e1

DP
type: SiteQuality
SIO_000300: 3.0174e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.62e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 554
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.913896802785691e-4
allele num: 6318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1434
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.111e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.403e0

FS
type: SiteQuality
SIO_000300: 3.383e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.519999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.0503e5

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.604e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.0487e5

QD
type: SiteQuality
SIO_000300: 1.159e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.69e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.751e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 2031
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 9.124087591240875e-3
allele num: 548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.07e-2

DP
type: SiteQuality
SIO_000300: 2.92489e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

FS
type: SiteQuality
SIO_000300: 1.364e0

MQ
type: SiteQuality
SIO_000300: 5.486e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
all individuals: 295
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 456
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2135
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 32
allele frequency: 3.532008830022075e-2
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.980982567353407e-3
allele num: 5048
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.07e-2

FS
type: SiteQuality
SIO_000300: 1.364e0

DP
type: SiteQuality
SIO_000300: 2.92489e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 5.486e1

GenotypeQuality
all individuals: 538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4555
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.698e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.94e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 2.80063e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.283e0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4457
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.390057361376673e-4
allele num: 4184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.082e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.648e0

FS
type: SiteQuality
SIO_000300: 2.092e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.86e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.799e0

DP
type: SiteQuality
SIO_000300: 2.74406e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.039e1

GenotypeQuality
all individuals: 247
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.590673575129534e-4
allele num: 3860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.465e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 5.188e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

DP
type: SiteQuality
SIO_000300: 2.27287e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.14e-2

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 14

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 608
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 5788
bin: 7.5e0
variant carriers: 62

GenotypeQuality
all individuals: 3291
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1463
bin: 9.75e1
variant carriers: 1421

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 127
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 21

Other
type: Population
allele count: 18
allele frequency: 1.267605633802817e-1
allele num: 142
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.730769230769231e-1
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 1.444444444444444e-1
allele num: 180
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 428
allele frequency: 1.10138960370561e-1
allele num: 3886
num of homozygotes: 24

African
type: Population
allele count: 48
allele frequency: 8.480565371024736e-2
allele num: 566
num of homozygotes: 2

South Asian
type: Population
allele count: 959
allele frequency: 1.244484817025694e-1
allele num: 7706
num of homozygotes: 62

East Asian
type: Population
allele count: 41
allele frequency: 1.474820143884892e-1
allele num: 278
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.559e1

DP
type: SiteQuality
SIO_000300: 2.32357e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.034e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5788
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.297690111601349e-4
allele num: 7706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.034e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.32357e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

QD
type: SiteQuality
SIO_000300: 1.559e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.300390117035111e-4
allele num: 7690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.409e0

VQSLOD
type: SiteQuality
SIO_000300: -2.4e-1

DP
type: SiteQuality
SIO_000300: 2.06861e5

MQ
type: SiteQuality
SIO_000300: 6.058e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 2.059e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.094e0

GenotypeQuality
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.432e1

VQSLOD
type: SiteQuality
SIO_000300: -5.696e-1

DP
type: SiteQuality
SIO_000300: 2.07058e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-1

QD
type: SiteQuality
SIO_000300: 2.52e0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.301066874837367e-4
allele num: 7686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.96e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: -1.087e0

DP
type: SiteQuality
SIO_000300: 2.06818e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.27e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6368
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.31e-2

QD
type: SiteQuality
SIO_000300: 1.221e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 2.06818e5

FS
type: SiteQuality
SIO_000300: 5.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -1.087e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 1306
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7688
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.31e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 2.07085e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.92e-2

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.424657534246575e-3
allele num: 292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.300390117035111e-4
allele num: 7690
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.415e0

VQSLOD
type: SiteQuality
SIO_000300: -2.417e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.069e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

DP
type: SiteQuality
SIO_000300: 2.0742e5

MQRankSum
type: SiteQuality
SIO_000300: -7.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.569373072970195e-4
allele num: 3892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 1.321e0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

VQSLOD
type: SiteQuality
SIO_000300: -1.677e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.94e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 2.07561e5

QD
type: SiteQuality
SIO_000300: 2.867e1

GenotypeQuality
all individuals: 41
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.28169014084507e-3
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.373e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

DP
type: SiteQuality
SIO_000300: 2.07428e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.46e-1

FS
type: SiteQuality
SIO_000300: 6.604e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.72e-2

MQ
type: SiteQuality
SIO_000300: 6.017e1

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.481389578163772e-4
allele num: 4030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -1.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 1.048e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.66e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 2.0117e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.326259946949602e-4
allele num: 7540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 6.578947368421052e-3
allele num: 304
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.55e-2

DP
type: SiteQuality
SIO_000300: 1.91903e5

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.623e0

QD
type: SiteQuality
SIO_000300: 1.338e1

GenotypeQuality
all individuals: 1903
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.509e-1

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.99e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 5.058e0

DP
type: SiteQuality
SIO_000300: 1.34576e5

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.488095238095238e-4
allele num: 6720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

QD
type: SiteQuality
SIO_000300: 1.951e1

DP
type: SiteQuality
SIO_000300: 1.07896e5

MQ
type: SiteQuality
SIO_000300: 5.829e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.99e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

GenotypeQuality
all individuals: 21
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.520681265206813e-4
allele num: 6576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.05253e5

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: -1.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.357e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

FS
type: SiteQuality
SIO_000300: 4.523e0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.17e-2

QD
type: SiteQuality
SIO_000300: 4.46e0

GenotypeQuality
all individuals: 310
bin: 9.75e1
variant carriers: 307

GenotypeQuality
all individuals: 56
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 470
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 1

South Asian
type: Population
allele count: 210
allele frequency: 3.345014335775725e-2
allele num: 6278
num of homozygotes: 8

East Asian
type: Population
allele count: 1
allele frequency: 7.042253521126761e-3
allele num: 142
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.409090909090909e-2
allele num: 88
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 112
allele frequency: 5.199628597957288e-2
allele num: 2154
num of homozygotes: 2

African
type: Population
allele count: 7
allele frequency: 3.333333333333333e-2
allele num: 210
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.96078431372549e-2
allele num: 102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.46e-2

DP
type: SiteQuality
SIO_000300: 9.3991e4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.684e0

GenotypeQuality
all individuals: 320
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.2281e4

QD
type: SiteQuality
SIO_000300: 1.146e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.05e-2

FS
type: SiteQuality
SIO_000300: 5.454e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.251e0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.333333333333333e-2
allele num: 150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.61e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.317e0

DP
type: SiteQuality
SIO_000300: 1.04836e5

QD
type: SiteQuality
SIO_000300: 7.77e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 4.675e0

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 6.548788474132286e-4
allele num: 6108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1998
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.526e0

QD
type: SiteQuality
SIO_000300: 8.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.061e0

DP
type: SiteQuality
SIO_000300: 1.09555e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.092e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.53e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.570845114671693e-4
allele num: 6366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.13945e5

VQSLOD
type: SiteQuality
SIO_000300: -8.865e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.69e-1

QD
type: SiteQuality
SIO_000300: 6.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.344e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.949e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3815
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.519295047098146e-4
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2208
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.945e0

VQSLOD
type: SiteQuality
SIO_000300: -6.288e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 1.16969e5

QD
type: SiteQuality
SIO_000300: 1.428e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.591e0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2240
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 4.545454545454546e-2
allele num: 176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.17265e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.089e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e-1

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.428881650380022e-4
allele num: 1842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 7.6607e4

FS
type: SiteQuality
SIO_000300: 2.722e0

VQSLOD
type: SiteQuality
SIO_000300: -9.15e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.99e-2

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2870
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.928571428571428e-4
allele num: 1120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.93e-2

DP
type: SiteQuality
SIO_000300: 5.1865e4

VQSLOD
type: SiteQuality
SIO_000300: -2.144e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

QD
type: SiteQuality
SIO_000300: 1.811e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 84

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 546
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 45

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 29

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 33

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 36

GenotypeQuality
all individuals: 10
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 36

GenotypeQuality
all individuals: 42
bin: 7.75e1
variant carriers: 42

GenotypeQuality
all individuals: 210
bin: 9.75e1
variant carriers: 210

African
type: Population
allele count: 8
allele frequency: 5.714285714285714e-1
allele num: 14
num of homozygotes: 1

Other
type: Population
allele count: 7
allele frequency: 5.833333333333334e-1
allele num: 12
num of homozygotes: 2

South Asian
type: Population
allele count: 272
allele frequency: 3.597883597883598e-1
allele num: 756
num of homozygotes: 38

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.833333333333334e-1
allele num: 60
num of homozygotes: 1

East Asian
type: Population
allele count: 4
allele frequency: 3.333333333333333e-1
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.690000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.874e1

DP
type: SiteQuality
SIO_000300: 2.1484e4

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 8.821e3

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 459
bin: 7.5e0
variant carriers: 142

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 39

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 6

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.909e-1

QD
type: SiteQuality
SIO_000300: 2.132e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 3.842e3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.039e1

GenotypeQuality
all individuals: 650
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.242e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.31e-2

DP
type: SiteQuality
SIO_000300: 2.232e3

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 504
bin: 7.5e0
variant carriers: 17

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.715e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.064e-1

DP
type: SiteQuality
SIO_000300: 2.358e3

VQSLOD
type: SiteQuality
SIO_000300: 9.8e-1

FS
type: SiteQuality
SIO_000300: 4.602e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

GenotypeQuality
all individuals: 1881
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.25e-1
allele num: 8
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.011e1

MQRankSum
type: SiteQuality
SIO_000300: -6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.46e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.788e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.4623e4

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.73e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.046e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 7.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.182e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 540
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3312
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 908
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.769911504424779e-3
allele num: 1130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.539999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 2.08094e5

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

GenotypeQuality
all individuals: 513
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18707
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3473
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.01450443190975e-4
allele num: 4964
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.821493624772313e-3
allele num: 1098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.29e-2

FS
type: SiteQuality
SIO_000300: 2.7041e1

QD
type: SiteQuality
SIO_000300: 4.54e0

DP
type: SiteQuality
SIO_000300: 2.1235e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e0

MQ
type: SiteQuality
SIO_000300: 5.777e1

GenotypeQuality
all individuals: 839
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18707
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.676164934629568e-4
allele num: 5966
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -3.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.83e-1

DP
type: SiteQuality
SIO_000300: 2.1235e5

FS
type: SiteQuality
SIO_000300: 2.7041e1

MQ
type: SiteQuality
SIO_000300: 5.777e1

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.29e-2

QD
type: SiteQuality
SIO_000300: 4.54e0

GenotypeQuality
all individuals: 129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2403
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3629
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.564102564102564e-3
allele num: 390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.490312965722802e-4
allele num: 6710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.497e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.22289e5

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.290000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

GenotypeQuality
all individuals: 479
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19556
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.753155680224404e-4
allele num: 5704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.31e-2

FS
type: SiteQuality
SIO_000300: 2.8377e1

MQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

DP
type: SiteQuality
SIO_000300: 2.25501e5

QD
type: SiteQuality
SIO_000300: 4.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.629e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.793e0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 538
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19556
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5704
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.814882032667877e-3
allele num: 1102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.997602876548142e-4
allele num: 5006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

FS
type: SiteQuality
SIO_000300: 2.8377e1

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.629e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.31e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.793e0

QD
type: SiteQuality
SIO_000300: 4.13e0

DP
type: SiteQuality
SIO_000300: 2.25501e5

GenotypeQuality
all individuals: 1854
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.771793054571226e-4
allele num: 5644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.23e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.38616e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.96e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5851
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.29366106080207e-4
allele num: 7730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.58241e5

VQSLOD
type: SiteQuality
SIO_000300: -2.869e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.76e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeQuality
all individuals: 2191
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 252
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17278
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2349
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576292559899117e-4
allele num: 6344
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.58241e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.76e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.869e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 5.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.666666666666666e-4
allele num: 1500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.811e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.240000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.161e1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

FS
type: SiteQuality
SIO_000300: 3.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 2.57111e5

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2085
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16776
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.288659793814433e-4
allele num: 7760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.09e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
SIO_000300: -5.886e-1

DP
type: SiteQuality
SIO_000300: 2.5813e5

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 2404
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16547
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.101736972704715e-4
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.03e-2

DP
type: SiteQuality
SIO_000300: 2.59898e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.416e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.38e-1

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1