17-7606063-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606063
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606063
    reference: chr 17
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1167T>G
  hgvsp: ENSP00000411061.2:p.Asp389Glu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1167T>G
  hgvsp: ENSP00000379727.2:p.Asp389Glu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*335T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2029T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.438T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.136T>G
  hgvsp: ENSP00000465025.1:p.Cys46Gly
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1167T>G
  hgvsp: ENSP00000324203.5:p.Asp389Glu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1167T>G
  hgvsp: ENSP00000397219.2:p.Asp389Glu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1068T>G
  hgvsp: ENSP00000434999.1:p.Asp356Glu
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp389Glu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-7606075-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606075
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606075
    reference: chr 17
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1179G>A
  hgvsp: ENST00000396463.2:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*347G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1179G>A
  hgvsp: ENST00000431639.2:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1179G>A
  hgvsp: ENST00000316024.5:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1179G>A
  hgvsp: ENST00000457584.2:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1080G>A
  hgvsp: ENST00000534050.1:c.1080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2041G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*7G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.450G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3955
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu393Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

17-7606077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606077
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606077
    reference: chr 17
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1082G>A
  hgvsp: ENSP00000434999.1:p.Cys361Tyr
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1181G>A
  hgvsp: ENSP00000324203.5:p.Cys394Tyr
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.452G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2043G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1181G>A
  hgvsp: ENSP00000379727.2:p.Cys394Tyr
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1181G>A
  hgvsp: ENSP00000411061.2:p.Cys394Tyr
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*349G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1181G>A
  hgvsp: ENSP00000397219.2:p.Cys394Tyr
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*9G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7824
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4963
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys394Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-7606088-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606088
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606088
    reference: chr 17
allele count: 27
allele frequency: 2.225372543848081e-4
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1192C>T
  hgvsp: ENSP00000324203.5:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*20C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1192C>T
  hgvsp: ENSP00000397219.2:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2054C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1093C>T
  hgvsp: ENSP00000434999.1:p.Arg365Trp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1192C>T
  hgvsp: ENSP00000379727.2:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1192C>T
  hgvsp: ENSP00000411061.2:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.463C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*360C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg398Trp
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

17-7606089-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606089
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606089
    reference: chr 17
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1193G>A
  hgvsp: ENSP00000411061.2:p.Arg398Gln
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.464G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*21G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*361G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1193G>A
  hgvsp: ENSP00000379727.2:p.Arg398Gln
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1193G>A
  hgvsp: ENSP00000397219.2:p.Arg398Gln
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1094G>A
  hgvsp: ENSP00000434999.1:p.Arg365Gln
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2055G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1193G>A
  hgvsp: ENSP00000324203.5:p.Arg398Gln
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg398Gln
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

17-7606113-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606113
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606113
    reference: chr 17
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1217C>G
  hgvsp: ENSP00000379727.2:p.Ser406Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2079C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1118C>G
  hgvsp: ENSP00000434999.1:p.Ser373Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1217C>G
  hgvsp: ENSP00000324203.5:p.Ser406Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*385C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1217C>G
  hgvsp: ENSP00000411061.2:p.Ser406Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1217C>G
  hgvsp: ENSP00000397219.2:p.Ser406Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.488C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*45C>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser406Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

17-7606119-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606119
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606119
    reference: chr 17
allele count: 218
allele frequency: 1.796752658040056e-3
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1124G>A
  hgvsp: ENSP00000434999.1:p.Gly375Asp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.494G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1223G>A
  hgvsp: ENSP00000411061.2:p.Gly408Asp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1223G>A
  hgvsp: ENSP00000324203.5:p.Gly408Asp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1223G>A
  hgvsp: ENSP00000397219.2:p.Gly408Asp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1223G>A
  hgvsp: ENSP00000379727.2:p.Gly408Asp
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2085G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*391G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13351
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 9.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly408Asp
num of homozygotes: 3
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ

17-7606137-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606137
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606137
    reference: chr 17
allele count: 3
allele frequency: 2.473288484368817e-5
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.512A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1241A>G
  hgvsp: ENSP00000379727.2:p.Asn414Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1241A>G
  hgvsp: ENSP00000397219.2:p.Asn414Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*69A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1241A>G
  hgvsp: ENSP00000411061.2:p.Asn414Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1142A>G
  hgvsp: ENSP00000434999.1:p.Asn381Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1241A>G
  hgvsp: ENSP00000324203.5:p.Asn414Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2103A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*409A>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4971
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn414Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

17-7606141-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606141
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606141
    reference: chr 17
allele count: 4
allele frequency: 3.298261816022956e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1245G>A
  hgvsp: ENST00000316024.5:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1245G>A
  hgvsp: ENST00000457584.2:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*413G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1245G>A
  hgvsp: ENST00000431639.2:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.516G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1245G>A
  hgvsp: ENST00000396463.2:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*73G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1146G>A
  hgvsp: ENST00000534050.1:c.1146G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2107G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln415Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

17-7606142-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606142
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606142
    reference: chr 17
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1246C>T
  hgvsp: ENSP00000397219.2:p.Arg416Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2108C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1246C>T
  hgvsp: ENSP00000411061.2:p.Arg416Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*414C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1246C>T
  hgvsp: ENSP00000379727.2:p.Arg416Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1246C>T
  hgvsp: ENSP00000324203.5:p.Arg416Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1147C>T
  hgvsp: ENSP00000434999.1:p.Arg383Cys
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*74C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.517C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19039
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3948
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg416Cys
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-7606144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606144
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606144
    reference: chr 17
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2110C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1248C>T
  hgvsp: ENST00000396463.2:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*76C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1248C>T
  hgvsp: ENST00000316024.5:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*416C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1248C>T
  hgvsp: ENST00000457584.2:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1149C>T
  hgvsp: ENST00000534050.1:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1248C>T
  hgvsp: ENST00000431639.2:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.519C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19035
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg416Arg
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

17-7606153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606153
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606153
    reference: chr 17
allele count: 5
allele frequency: 4.126025317291347e-5
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1158C>T
  hgvsp: ENST00000534050.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2119C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1257C>T
  hgvsp: ENST00000431639.2:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*425C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.528C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1257C>T
  hgvsp: ENST00000396463.2:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1257C>T
  hgvsp: ENST00000316024.5:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1257C>T
  hgvsp: ENST00000457584.2:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*85C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe419Phe
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

17-7606157-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606157
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606157
    reference: chr 17
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2123C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*429C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1261C>G
  hgvsp: ENSP00000397219.2:p.Leu421Val
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*89C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1261C>G
  hgvsp: ENSP00000324203.5:p.Leu421Val
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1261C>G
  hgvsp: ENSP00000411061.2:p.Leu421Val
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1261C>G
  hgvsp: ENSP00000379727.2:p.Leu421Val
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1162C>G
  hgvsp: ENSP00000434999.1:p.Leu388Val
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.532C>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14633
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu421Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

17-7606160-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606160
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606160
    reference: chr 17
allele count: 2
allele frequency: 1.650982334489021e-5
allele num: 121140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1264G>A
  hgvsp: ENSP00000411061.2:p.Asp422Asn
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1264G>A
  hgvsp: ENSP00000379727.2:p.Asp422Asn
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1264G>A
  hgvsp: ENSP00000324203.5:p.Asp422Asn
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*432G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*92G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1264G>A
  hgvsp: ENSP00000397219.2:p.Asp422Asn
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.535G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1165G>A
  hgvsp: ENSP00000434999.1:p.Asp389Asn
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2126G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4931
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp422Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-7606162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606162
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606162
    reference: chr 17
allele count: 3
allele frequency: 2.476964232636481e-5
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.537C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*434C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*94C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1266C>T
  hgvsp: ENST00000396463.2:c.1266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1266C>T
  hgvsp: ENST00000457584.2:c.1266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1266C>T
  hgvsp: ENST00000431639.2:c.1266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1167C>T
  hgvsp: ENST00000534050.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2128C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1266C>T
  hgvsp: ENST00000316024.5:c.1266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14515
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14223
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1266C>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

17-7606164-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606164
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606164
    reference: chr 17
allele count: 3
allele frequency: 2.479215906649257e-5
allele num: 121006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268C>T
  hgvsp: ENSP00000397219.2:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268C>T
  hgvsp: ENSP00000411061.2:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268C>T
  hgvsp: ENSP00000379727.2:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268C>T
  hgvsp: ENSP00000324203.5:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.539C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169C>T
  hgvsp: ENSP00000434999.1:p.Pro390Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro423Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-7606173-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606173
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606173
    reference: chr 17
allele count: 2
allele frequency: 1.652974527662529e-5
allele num: 120994
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.548C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+9C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+9C>G
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-7606181-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606181
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606181
    reference: chr 17
allele count: 2
allele frequency: 1.654779831543413e-5
allele num: 120862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.556C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+17C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+17C>A
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2973
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

17-7606188-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606188
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606188
    reference: chr 17
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.563A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+24A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+24A>G
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

17-7606200-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606200
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606200
    reference: chr 17
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.575G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.2G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+36G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+36G>C
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2973
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18948
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-7606206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606206
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606206
    reference: chr 17
allele count: 2
allele frequency: 1.658842459731599e-5
allele num: 120566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.8C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.581C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+42C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+42C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-7606211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606211
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606211
    reference: chr 17
allele count: 1432
allele frequency: 1.187612997395877e-2
allele num: 120578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*436+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2130+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1268+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.586G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*96+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.13G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1268+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1169+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1268+47G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1268+47G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 4.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 9.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 2.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 3.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 1.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 5.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 5.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19936
  bin: 9.75e1
  variant carriers: 1402
num of homozygotes: 19
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

17-7606264-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606264
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606264
    reference: chr 17
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.603+36C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-47C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.66C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-47C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7984
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

17-7606266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606266
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606266
    reference: chr 17
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.68C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.603+38C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-45C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-45C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-7606273-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606273
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606272
    reference: chr 17
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.76delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-37delG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-37delG
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: TG
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

17-7606283-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606283
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606283
    reference: chr 17
allele count: 2
allele frequency: 1.650846058605035e-5
allele num: 121150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.85G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-28G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-28G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35898
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

17-7606287-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606287
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606287
    reference: chr 17
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.89G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-24G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-24G>T
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

17-7606297-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606297
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606295
    reference: chr 17
allele count: 2
allele frequency: 1.650355651642929e-5
allele num: 121186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-6_*437-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.107_108delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-6_604-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-6_1269-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-6_1269-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-6_*97-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-6_1269-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-6_1170-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-6_1269-5delTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-6_2131-5delTC
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: CCT
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

17-7606297-CCTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606297
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606293
    reference: chr 17
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-8_*97-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-8_1269-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-8_1269-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-8_*437-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-8_604-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.105_108delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-8_2131-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-8_1269-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-8_1269-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-8_1170-5delTCTC
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CCTCT
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

17-7606298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606298
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606298
    reference: chr 17
allele count: 10
allele frequency: 8.251914444151043e-5
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.100C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-13C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-13C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7981
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

17-7606304-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606304
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606304
    reference: chr 17
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-7C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.106C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-7C>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1269-7C>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

17-7606306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606306
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606306
    reference: chr 17
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.108C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-5C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-5C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1269-5C>T
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

17-7606307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606307
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606307
    reference: chr 17
allele count: 2
allele frequency: 1.650192247396822e-5
allele num: 121198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1170-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*97-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1269-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.604-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1269-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*437-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1269-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2131-4G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.109G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1269-4G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1269-4G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-7606314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606314
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606314
    reference: chr 17
allele count: 4
allele frequency: 3.299676631690094e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.607C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2134C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1272C>T
  hgvsp: ENST00000396463.2:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1272C>T
  hgvsp: ENST00000431639.2:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1272C>T
  hgvsp: ENST00000457584.2:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1173C>T
  hgvsp: ENST00000534050.1:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*440C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1272C>T
  hgvsp: ENST00000316024.5:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*100C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.116C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr424Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

17-7606315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606315
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606315
    reference: chr 17
allele count: 4
allele frequency: 3.299404457495422e-5
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.117G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1273G>A
  hgvsp: ENSP00000324203.5:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1273G>A
  hgvsp: ENSP00000397219.2:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1174G>A
  hgvsp: ENSP00000434999.1:p.Gly392Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.608G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1273G>A
  hgvsp: ENSP00000379727.2:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1273G>A
  hgvsp: ENSP00000411061.2:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*441G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*101G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2135G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly425Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-7606323-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606323
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606323
    reference: chr 17
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*449C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1281C>G
  hgvsp: ENSP00000411061.2:p.Phe427Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.616C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1281C>G
  hgvsp: ENSP00000324203.5:p.Phe427Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1281C>G
  hgvsp: ENSP00000379727.2:p.Phe427Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1182C>G
  hgvsp: ENSP00000434999.1:p.Phe394Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1281C>G
  hgvsp: ENSP00000397219.2:p.Phe427Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2143C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.125C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*109C>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe427Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

17-7606340-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606340
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606340
    reference: chr 17
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1199C>T
  hgvsp: ENSP00000434999.1:p.Thr400Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*466C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.142C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1298C>T
  hgvsp: ENSP00000411061.2:p.Thr433Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1298C>T
  hgvsp: ENSP00000397219.2:p.Thr433Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1298C>T
  hgvsp: ENSP00000324203.5:p.Thr433Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1298C>T
  hgvsp: ENSP00000379727.2:p.Thr433Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.633C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2160C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*126C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr433Met
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

17-7606345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606345
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606345
    reference: chr 17
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.147G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1303G>A
  hgvsp: ENSP00000379727.2:p.Gly435Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1303G>A
  hgvsp: ENSP00000411061.2:p.Gly435Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*471G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1204G>A
  hgvsp: ENSP00000434999.1:p.Gly402Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1303G>A
  hgvsp: ENSP00000324203.5:p.Gly435Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2165G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*131G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1303G>A
  hgvsp: ENSP00000397219.2:p.Gly435Arg
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.638G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly435Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

17-7606350-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606350
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606350
    reference: chr 17
allele count: 2050
allele frequency: 1.689829698138715e-2
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*476T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1209T>C
  hgvsp: ENST00000534050.1:c.1209T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1308T>C
  hgvsp: ENST00000316024.5:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.152T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.643T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1308T>C
  hgvsp: ENST00000431639.2:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1308T>C
  hgvsp: ENST00000457584.2:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1308T>C
  hgvsp: ENST00000396463.2:c.1308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2170T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*136T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 4.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 8.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 6.25e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 5.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 3.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 7.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 6.75e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 9.75e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 8.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Ala436Ala
num of homozygotes: 119
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

17-7606355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606355
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606355
    reference: chr 17
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*481C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1214C>T
  hgvsp: ENSP00000434999.1:p.Ser405Phe
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.648C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.157C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1313C>T
  hgvsp: ENSP00000397219.2:p.Ser438Phe
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1313C>T
  hgvsp: ENSP00000324203.5:p.Ser438Phe
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2175C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1313C>T
  hgvsp: ENSP00000411061.2:p.Ser438Phe
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1313C>T
  hgvsp: ENSP00000379727.2:p.Ser438Phe
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*141C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3129
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser438Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-7606355-CTGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606355
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606351
    reference: chr 17
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1217_1220delTGTG
  hgvsp: ENSP00000434999.1:p.Val406GlyfsTer16
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1316_1319delTGTG
  hgvsp: ENSP00000397219.2:p.Val439GlyfsTer16
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1316_1319delTGTG
  hgvsp: ENSP00000324203.5:p.Val439GlyfsTer16
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.651_654delTGTG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1316_1319delTGTG
  hgvsp: ENSP00000411061.2:p.Val439GlyfsTer16
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1316_1319delTGTG
  hgvsp: ENSP00000379727.2:p.Val439GlyfsTer16
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*144_*147delTGTG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*484_*487delTGTG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2178_2181delTGTG
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.160_163delTGTG
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val439GlyfsTer16
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: CTGTG
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

17-7606367-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606367
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606367
    reference: chr 17
allele count: 2
allele frequency: 1.648614339647526e-5
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*493C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1226C>T
  hgvsp: ENSP00000434999.1:p.Thr409Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*153C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1325C>T
  hgvsp: ENSP00000411061.2:p.Thr442Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.660C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1325C>T
  hgvsp: ENSP00000324203.5:p.Thr442Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2187C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1325C>T
  hgvsp: ENSP00000379727.2:p.Thr442Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1325C>T
  hgvsp: ENSP00000397219.2:p.Thr442Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.169C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr442Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

17-7606368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606368
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606368
    reference: chr 17
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2188G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*154G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1326G>A
  hgvsp: ENST00000396463.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.170G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1326G>A
  hgvsp: ENST00000457584.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1227G>A
  hgvsp: ENST00000534050.1:c.1227G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1326G>A
  hgvsp: ENST00000431639.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1326G>A
  hgvsp: ENST00000316024.5:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.661G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*494G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr442Thr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

17-7606371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606371
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606371
    reference: chr 17
allele count: 3
allele frequency: 2.472921509471289e-5
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1329C>T
  hgvsp: ENST00000396463.2:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2191C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1329C>T
  hgvsp: ENST00000431639.2:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1329C>T
  hgvsp: ENST00000457584.2:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.664C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.173C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1230C>T
  hgvsp: ENST00000534050.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*157C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1329C>T
  hgvsp: ENST00000316024.5:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp443Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

17-7606374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606374
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606374
    reference: chr 17
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1332G>A
  hgvsp: ENST00000316024.5:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1332G>A
  hgvsp: ENST00000431639.2:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1332G>A
  hgvsp: ENST00000457584.2:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.176G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.667G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*160G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*500G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1233G>A
  hgvsp: ENST00000534050.1:c.1233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1332G>A
  hgvsp: ENST00000396463.2:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2194G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly444Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-7606399-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606399
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606399
    reference: chr 17
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1258C>G
  hgvsp: ENSP00000434999.1:p.Pro420Ala
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*185C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.201C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*525C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2219C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1357C>G
  hgvsp: ENSP00000397219.2:p.Pro453Ala
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.692C>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1357C>G
  hgvsp: ENSP00000379727.2:p.Pro453Ala
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1357C>G
  hgvsp: ENSP00000324203.5:p.Pro453Ala
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1357C>G
  hgvsp: ENSP00000411061.2:p.Pro453Ala
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro453Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-7606401-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606401
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606401
    reference: chr 17
allele count: 344
allele frequency: 2.836224523448321e-3
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1359C>T
  hgvsp: ENST00000396463.2:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*187C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*527C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1359C>T
  hgvsp: ENST00000457584.2:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.694C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1359C>T
  hgvsp: ENST00000431639.2:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1260C>T
  hgvsp: ENST00000534050.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2221C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1359C>T
  hgvsp: ENST00000316024.5:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.203C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 5.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 4.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro453Pro
num of homozygotes: 8
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

17-7606402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606402
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606402
    reference: chr 17
allele count: 3
allele frequency: 2.472758444470088e-5
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*188G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*528G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1360G>A
  hgvsp: ENSP00000397219.2:p.Val454Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1360G>A
  hgvsp: ENSP00000379727.2:p.Val454Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.695G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1360G>A
  hgvsp: ENSP00000324203.5:p.Val454Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.204G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1360G>A
  hgvsp: ENSP00000411061.2:p.Val454Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1261G>A
  hgvsp: ENSP00000434999.1:p.Val421Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2222G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35684
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Val454Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

17-7606402-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606402
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606402
    reference: chr 17
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1360G>T
  hgvsp: ENSP00000379727.2:p.Val454Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2222G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1360G>T
  hgvsp: ENSP00000324203.5:p.Val454Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1360G>T
  hgvsp: ENSP00000411061.2:p.Val454Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*528G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*188G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1360G>T
  hgvsp: ENSP00000397219.2:p.Val454Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.204G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.695G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1261G>T
  hgvsp: ENSP00000434999.1:p.Val421Leu
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val454Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

17-7606404-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606404
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606404
    reference: chr 17
allele count: 3
allele frequency: 2.472758444470088e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2224G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*530G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.206G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1362G>T
  hgvsp: ENST00000431639.2:c.1362G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1362G>T
  hgvsp: ENST00000396463.2:c.1362G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.697G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1263G>T
  hgvsp: ENST00000534050.1:c.1263G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*190G>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1362G>T
  hgvsp: ENST00000316024.5:c.1362G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1362G>T
  hgvsp: ENST00000457584.2:c.1362G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val454Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

17-7606411-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606411
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606411
    reference: chr 17
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1369T>C
  hgvsp: ENSP00000379727.2:p.Phe457Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1270T>C
  hgvsp: ENSP00000434999.1:p.Phe424Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.704T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.213T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*197T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*537T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1369T>C
  hgvsp: ENSP00000397219.2:p.Phe457Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1369T>C
  hgvsp: ENSP00000324203.5:p.Phe457Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1369T>C
  hgvsp: ENSP00000411061.2:p.Phe457Leu
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2231T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe457Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

17-7606419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606419
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606419
    reference: chr 17
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1278C>T
  hgvsp: ENST00000534050.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*205C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1377C>T
  hgvsp: ENST00000457584.2:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1377C>T
  hgvsp: ENST00000396463.2:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1377C>T
  hgvsp: ENST00000316024.5:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2239C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.712C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.221C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1377C>T
  hgvsp: ENST00000431639.2:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*545C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro459Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

17-7606429-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606429
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606429
    reference: chr 17
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1288T>G
  hgvsp: ENSP00000434999.1:p.Cys430Gly
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.231T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*215T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.722T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1387T>G
  hgvsp: ENSP00000379727.2:p.Cys463Gly
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1387T>G
  hgvsp: ENSP00000411061.2:p.Cys463Gly
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1387T>G
  hgvsp: ENSP00000324203.5:p.Cys463Gly
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*555T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2249T>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1387T>G
  hgvsp: ENSP00000397219.2:p.Cys463Gly
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys463Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

17-7606436-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606436
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606436
    reference: chr 17
allele count: 2
allele frequency: 1.648424106554134e-5
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1394A>G
  hgvsp: ENSP00000411061.2:p.Asn465Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1394A>G
  hgvsp: ENSP00000397219.2:p.Asn465Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1394A>G
  hgvsp: ENSP00000379727.2:p.Asn465Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*222A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.729A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.238A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2256A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1295A>G
  hgvsp: ENSP00000434999.1:p.Asn432Ser
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*562A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1394A>G
  hgvsp: ENSP00000324203.5:p.Asn465Ser
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn465Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

17-7606441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606441
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606441
    reference: chr 17
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1300G>A
  hgvsp: ENSP00000434999.1:p.Val434Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1399G>A
  hgvsp: ENSP00000379727.2:p.Val467Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2261G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1399G>A
  hgvsp: ENSP00000324203.5:p.Val467Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1399G>A
  hgvsp: ENSP00000411061.2:p.Val467Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*227G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1399G>A
  hgvsp: ENSP00000397219.2:p.Val467Met
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.243G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.734G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*567G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35670
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val467Met
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

17-7606452-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606452
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606452
    reference: chr 17
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+7A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+7A>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1403+7A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

17-7606453-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606453
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606453
    reference: chr 17
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+8G>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+8G>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1403+8G>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-7606463-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606463
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606463
    reference: chr 17
allele count: 11
allele frequency: 9.067079905702368e-5
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+18A>G
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+18A>G
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

17-7606468-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606468
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606468
    reference: chr 17
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+23T>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+23T>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-7606470-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606470
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606470
    reference: chr 17
allele count: 11
allele frequency: 9.067229384417554e-5
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+25T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+25T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-7606476-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606476
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606476
    reference: chr 17
allele count: 49
allele frequency: 4.039304909816335e-4
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+31C>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+31C>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7939
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

17-7606482-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606482
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606482
    reference: chr 17
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+37T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+37T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3678
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-7606488-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606488
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606488
    reference: chr 17
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+43A>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+43A>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35707
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

17-7606494-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606494
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606494
    reference: chr 17
allele count: 9
allele frequency: 7.419253787941239e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1403+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2265+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.738+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1304+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1403+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1403+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*231+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*571+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.247+49G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1403+49G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

17-7606510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606510
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606510
    reference: chr 17
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1404-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1305-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1404-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*232-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2266-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.248-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1404-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.739-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*572-51G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1404-51G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

17-7606515-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606515
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606515
    reference: chr 17
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*572-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.739-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1404-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1404-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*232-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1305-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.248-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1404-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2266-46T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1404-46T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

17-7606516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606516
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606516
    reference: chr 17
allele count: 2
allele frequency: 1.648723063986942e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1404-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.248-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1404-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1404-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.739-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*232-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1305-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1404-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2266-45G>A
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*572-45G>A
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5971
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

17-7606520-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606520
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606520
    reference: chr 17
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.739-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1404-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2266-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*572-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1404-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*232-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1404-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1305-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.248-41T>C
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1404-41T>C
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum

17-7606521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606521
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7606521
    reference: chr 17
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000498114
  gene symbol: WRAP53
  hgvsc: ENST00000498114.1:n.248-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000465025
  ensembl transcript: ENST00000463804
  gene symbol: WRAP53
  hgvsc: ENST00000463804.2:c.*232-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000379727
  ensembl transcript: ENST00000396463
  gene symbol: WRAP53
  hgvsc: ENST00000396463.2:c.1404-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000411061
  ensembl transcript: ENST00000457584
  gene symbol: WRAP53
  hgvsc: ENST00000457584.2:c.1404-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000324203
  ensembl transcript: ENST00000316024
  gene symbol: WRAP53
  hgvsc: ENST00000316024.5:c.1404-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000434999
  ensembl transcript: ENST00000534050
  gene symbol: WRAP53
  hgvsc: ENST00000534050.1:c.1305-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000397219
  ensembl transcript: ENST00000431639
  gene symbol: WRAP53
  hgvsc: ENST00000431639.2:c.1404-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000471973
  gene symbol: WRAP53
  hgvsc: ENST00000471973.2:n.739-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl transcript: ENST00000467699
  gene symbol: WRAP53
  hgvsc: ENST00000467699.1:n.2266-40C>T
  variant of: http://identifiers.org/hgnc/25522
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141499
  ensembl protein: ENSP00000432991
  ensembl transcript: ENST00000498311
  gene symbol: WRAP53
  hgvsc: ENST00000498311.1:c.*572-40C>T
  variant of: http://identifiers.org/hgnc/25522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7819
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4958
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15083
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -3.74e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

FS
type: SiteQuality
SIO_000300: 6.1e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.85e-1

DP
type: SiteQuality
SIO_000300: 2.541602e6

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.899e1

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

DP
type: SiteQuality
SIO_000300: 2.542325e6

FS
type: SiteQuality
SIO_000300: 1.654e0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.04e0

QD
type: SiteQuality
SIO_000300: 1.319e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.57e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.781e1

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

DP
type: SiteQuality
SIO_000300: 2.542473e6

FS
type: SiteQuality
SIO_000300: 2.346e0

MQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -1.654e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.493e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4959
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7821
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19178
bin: 9.75e1
variant carriers: 27

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 3.749025253434107e-4
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.207e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.54406e6

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

GenotypeQuality
all individuals: 15138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3023
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7823
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4959
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19162
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

FS
type: SiteQuality
SIO_000300: 1.228e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

QD
type: SiteQuality
SIO_000300: 4.22e0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: -1.142e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

DP
type: SiteQuality
SIO_000300: 2.542454e6

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7814
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.803e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 2.758e0

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

DP
type: SiteQuality
SIO_000300: 2.542586e6

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 15100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19194
bin: 9.75e1
variant carriers: 215

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7806
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3012
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.075765438505449e-3
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497885993583016e-5
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 188
allele frequency: 1.807692307692308e-2
allele num: 10400
num of homozygotes: 3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

FS
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.184e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.08e-2

QD
type: SiteQuality
SIO_000300: 1.267e1

DP
type: SiteQuality
SIO_000300: 2.549613e6

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19041
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15088
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7822
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.744e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 2.537768e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7810
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19041
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15072
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.119e0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.152e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.516e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.537474e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15059
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7806
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3012
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 5.054e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.537154e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.387e1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3010
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14994
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.535818e6

MQRankSum
type: SiteQuality
SIO_000300: 7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.078e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.085e1

GenotypeQuality
all individuals: 7671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4943
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19033
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 14736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3008
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.005104338687885e-5
allele num: 66610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.531438e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 1.329e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.487e1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.28e-1

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19024
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.294e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.69e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.52825e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.94e-1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19019
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.936e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 2.525339e6

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 6.18e0

QD
type: SiteQuality
SIO_000300: 1.1e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7540
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4909
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19017
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

DP
type: SiteQuality
SIO_000300: 2.52185e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18998
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 14197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 1.265e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.51934e6

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

GenotypeQuality
all individuals: 246
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18968
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4771
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4021
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7067
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.02e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.498969e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e0

GenotypeQuality
all individuals: 390
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18955
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 2.482196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 4.007e0

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.602e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.824e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.384e1

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18953
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507113576079093e-5
allele num: 66352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.022e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.679e0

MQRankSum
type: SiteQuality
SIO_000300: -1.141e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.23e0

DP
type: SiteQuality
SIO_000300: 2.470477e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.332e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -7.531e-1

GenotypeQuality
all individuals: 1302
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4514
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: -1.132e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

FS
type: SiteQuality
SIO_000300: 1.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 2.449721e6

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

GenotypeQuality
all individuals: 678
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3952
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18954
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9908
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021148036253776e-5
allele num: 66200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.57e0

QD
type: SiteQuality
SIO_000300: 1.23e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

DP
type: SiteQuality
SIO_000300: 2.446478e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.997e-1

GenotypeQuality
all individuals: 3493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 675
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3924
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4520
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5968
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2261
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1034
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 105
allele frequency: 9.132022960514873e-3
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 22
allele frequency: 3.358778625954198e-3
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 40
allele frequency: 3.857280617164899e-3
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1243
allele frequency: 1.877983924578474e-2
allele num: 66188
num of homozygotes: 19

South Asian
type: Population
allele count: 14
allele frequency: 8.489993935718618e-4
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 8.888888888888889e-3
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.862e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.455357e6

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35915
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e-1

FS
type: SiteQuality
SIO_000300: 1.864e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.238e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.264e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.09e-1

DP
type: SiteQuality
SIO_000300: 2.930011e6

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35908
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.44e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -3.263e-1

DP
type: SiteQuality
SIO_000300: 2.930185e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

FS
type: SiteQuality
SIO_000300: 2.841e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 2.931636e6

QD
type: SiteQuality
SIO_000300: 9.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5728
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.937233630375823e-4
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.538e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 2.933645e6

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

FS
type: SiteQuality
SIO_000300: 3.202e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.072e0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35899
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3090
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.208e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.799e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 8.029999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

FS
type: SiteQuality
SIO_000300: 8.6e0

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.94e-1

DP
type: SiteQuality
SIO_000300: 2.934369e6

GenotypeQuality
all individuals: 3720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35901
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.848e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

DP
type: SiteQuality
SIO_000300: 2.936109e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

GenotypeQuality
all individuals: 3215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3092
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35901
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 1.848e0

DP
type: SiteQuality
SIO_000300: 2.936109e6

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

GenotypeQuality
all individuals: 35905
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.665571235260004e-4
allele num: 10346
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-1

FS
type: SiteQuality
SIO_000300: 5.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.229e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.89e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.936148e6

QD
type: SiteQuality
SIO_000300: 1.306e1

GenotypeQuality
all individuals: 3090
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5973
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 5.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.102e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

DP
type: SiteQuality
SIO_000300: 2.937039e6

GenotypeQuality
all individuals: 3207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5999
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.756e-1

FS
type: SiteQuality
SIO_000300: 9.438000000000001e0

QD
type: SiteQuality
SIO_000300: 1.016e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.937399e6

GenotypeQuality
all individuals: 2522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931620629708325e-4
allele num: 10354
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 2.272e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.937366e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 1.279e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3092
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500720115218435e-5
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

FS
type: SiteQuality
SIO_000300: 2.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.938387e6

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6088
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35903
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.255e1

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 3.708e0

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

DP
type: SiteQuality
SIO_000300: 2.938875e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-2

GenotypeQuality
all individuals: 3091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2364
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6176
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.083e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 1.037e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.539e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

DP
type: SiteQuality
SIO_000300: 2.938853e6

GenotypeQuality
all individuals: 5823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3099
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.224e0

DP
type: SiteQuality
SIO_000300: 2.937043e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeDepth
all individuals: 5233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35894
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 2.885e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.084e0

QD
type: SiteQuality
SIO_000300: 1.461e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.937797e6

GenotypeQuality
all individuals: 2448
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36565
bin: 9.75e1
variant carriers: 1913

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5907
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3112
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3628
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3135
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 1

South Asian
type: Population
allele count: 115
allele frequency: 6.964631782945737e-3
allele num: 16512
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1496
allele frequency: 1.439568899153195e-1
allele num: 10392
num of homozygotes: 115

European (Non-Finnish)
type: Population
allele count: 309
allele frequency: 4.633239369039765e-3
allele num: 66692
num of homozygotes: 1

Latino
type: Population
allele count: 114
allele frequency: 9.853068280034571e-3
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.434589800443459e-3
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.819284414796847e-3
allele num: 6596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 2.971056e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.58e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
all individuals: 35756
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.941746e6

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 5.9e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.272e0

GenotypeQuality
all individuals: 35756
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

FS
type: SiteQuality
SIO_000300: 5.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.272e0

QD
type: SiteQuality
SIO_000300: 1.292e1

DP
type: SiteQuality
SIO_000300: 2.941746e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
all individuals: 3763
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35755
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6065
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.325e1

DP
type: SiteQuality
SIO_000300: 2.941812e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.624e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

FS
type: SiteQuality
SIO_000300: 2.139e0

GenotypeQuality
all individuals: 3234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3211
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5999
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.942052e6

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.343e1

FS
type: SiteQuality
SIO_000300: 5.149e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.547e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3768
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35751
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99868058054456e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 6.303e0

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.942178e6

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35750
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.942139e6

QD
type: SiteQuality
SIO_000300: 1.273e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.814e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.659e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3747
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6181
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 2.647e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

QD
type: SiteQuality
SIO_000300: 1.156e1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 2.940905e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

GenotypeQuality
all individuals: 6134
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35823
bin: 9.75e1
variant carriers: 332

GenotypeQuality
all individuals: 3201
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.49985000299994e-5
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 2.679806362378977e-3
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 305
allele frequency: 2.933820700269334e-2
allele num: 10396
num of homozygotes: 8

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

QD
type: SiteQuality
SIO_000300: 1.413e1

DP
type: SiteQuality
SIO_000300: 2.943838e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

FS
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.146e1

DP
type: SiteQuality
SIO_000300: 2.939145e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

FS
type: SiteQuality
SIO_000300: 4.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.418e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 3201
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35684
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.418e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.939145e6

FS
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35680
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.939231e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.443e0

VQSLOD
type: SiteQuality
SIO_000300: 6.73e-1

FS
type: SiteQuality
SIO_000300: 1.753e0

QD
type: SiteQuality
SIO_000300: 1.101e1

GenotypeQuality
all individuals: 3195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3771
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 2.938887e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.621e0

VQSLOD
type: SiteQuality
SIO_000300: -1.967e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

QD
type: SiteQuality
SIO_000300: 8.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.818e0

GenotypeQuality
all individuals: 6179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35672
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.105e1

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

FS
type: SiteQuality
SIO_000300: 5.972e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.938726e6

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35674
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 2.938035e6

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 8.254e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.745e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35673
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.75e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

DP
type: SiteQuality
SIO_000300: 2.937691e6

FS
type: SiteQuality
SIO_000300: 1.324e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.889e1

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.521e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

QD
type: SiteQuality
SIO_000300: 1.382e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.826e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.937407e6

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35678
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3750
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.031221582297666e-4
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.216e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -7.4e-2

FS
type: SiteQuality
SIO_000300: 8.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

DP
type: SiteQuality
SIO_000300: 2.93603e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.15e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35677
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 1.238e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -2.215e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.936042e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

QD
type: SiteQuality
SIO_000300: 2.119e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35683
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.271088513981974e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.406e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.054e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

DP
type: SiteQuality
SIO_000300: 2.935751e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35678
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3726
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5683
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

FS
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 2.934952e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

QD
type: SiteQuality
SIO_000300: 1.494e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35684
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.496926260233305e-5
allele num: 66694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.684e1

DP
type: SiteQuality
SIO_000300: 2.934949e6

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.25e-2

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35701
bin: 9.75e1
variant carriers: 49

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2368
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 7.34742840005998e-4
allele num: 66690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.241e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.258e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.936385e6

VQSLOD
type: SiteQuality
SIO_000300: 5.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.22e-1

GenotypeQuality
all individuals: 3253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 1.629e1

DP
type: SiteQuality
SIO_000300: 2.93603e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 1.156e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

GenotypeQuality
all individuals: 5539
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.553e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 2.937072e6

MQRankSum
type: SiteQuality
SIO_000300: -7.39e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 3.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.869e0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3262
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35728
bin: 9.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.57346258709482e-4
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998980173370527e-5
allele num: 66678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.293e0

VQSLOD
type: SiteQuality
SIO_000300: 9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

FS
type: SiteQuality
SIO_000300: 2.448e0

QD
type: SiteQuality
SIO_000300: 1.327e1

DP
type: SiteQuality
SIO_000300: 2.938568e6

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3079
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 3.427159e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.088e0

QD
type: SiteQuality
SIO_000300: 1.143e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.361e1

MQ
type: SiteQuality
SIO_000300: 5.833e1

MQRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.04e-1

DP
type: SiteQuality
SIO_000300: 3.426499e6

VQSLOD
type: SiteQuality
SIO_000300: -1.791e0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40614
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.467e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.831e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.95e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.426516e6

GenotypeQuality
all individuals: 1791
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40609
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.369e0

MQRankSum
type: SiteQuality
SIO_000300: -2.099e0

QD
type: SiteQuality
SIO_000300: 1.46e1

FS
type: SiteQuality
SIO_000300: 1.025e0

DP
type: SiteQuality
SIO_000300: 3.42614e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e0

GenotypeQuality
all individuals: 155
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40605
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5809
bin: 6.25e1
variant carriers: 0