X-20190971-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020190971
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020190971
    reference: chr 0
allele count: 6
allele frequency: 7.200028800115201e-5
allele num: 83333
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1162A>G
  hgvsp: ENSP00000440220.1:p.Ile388Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1159A>G
  hgvsp: ENSP00000444837.1:p.Ile387Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177189
  ensembl transcript: ENST00000479809
  gene symbol: RPS6KA3
  hgvsc: ENST00000479809.1:n.12A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1246A>G
  hgvsp: ENSP00000368884.3:p.Ile416Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1156A>G
  hgvsp: ENSP00000368865.4:p.Ile386Val
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile416Val
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

X-20190975-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020190975
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020190975
    reference: chr 0
allele count: 8
allele frequency: 9.559429780013623e-5
allele num: 83687
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177189
  ensembl transcript: ENST00000479809
  gene symbol: RPS6KA3
  hgvsc: ENST00000479809.1:n.8C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1152C>T
  hgvsp: ENST00000379548.4:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1242C>T
  hgvsp: ENST00000379565.3:c.1242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1158C>T
  hgvsp: ENST00000544447.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1155C>T
  hgvsp: ENST00000540702.1:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Asn414Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

X-20190980-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020190980
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020190980
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 84025
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1237A>G
  hgvsp: ENSP00000368884.3:p.Arg413Gly
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1147A>G
  hgvsp: ENSP00000368865.4:p.Arg383Gly
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1153A>G
  hgvsp: ENSP00000440220.1:p.Arg385Gly
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1150A>G
  hgvsp: ENSP00000444837.1:p.Arg384Gly
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177189
  ensembl transcript: ENST00000479809
  gene symbol: RPS6KA3
  hgvsc: ENST00000479809.1:n.3A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg413Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

X-20190993-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020190993
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020190994
    reference: chr 0
allele count: 1
allele frequency: 1.182955970378782e-5
allele num: 84534
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1141-8dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1144-8dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1228-5dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1144-5dupT
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: c.1228-5dupT
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

X-20190995-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020190995
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020190995
    reference: chr 0
allele count: 1
allele frequency: 1.182270669046972e-5
allele num: 84583
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1144-9T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1228-6T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1141-9T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1144-6T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 40038
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: c.1228-6T>C
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-20191018-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020191018
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020191018
    reference: chr 0
allele count: 1
allele frequency: 1.179426091263991e-5
allele num: 84787
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1144-29A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1228-29A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1144-32A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1141-32A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

X-20191028-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020191028
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020191028
    reference: chr 0
allele count: 2
allele frequency: 2.360661929605061e-5
allele num: 84722
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1228-39G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1141-42G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1144-39G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1144-42G>A
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

X-20193235-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193235
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193235
    reference: chr 0
allele count: 1
allele frequency: 1.142595978062157e-5
allele num: 87520
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+47T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+47T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+47T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+47T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

X-20193236-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193236
    reference: chr 0
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    type: ExactPosition
    position: 24020193236
    reference: chr 0
allele count: 1
allele frequency: 1.143157630005601e-5
allele num: 87477
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+46A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+46A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+46A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-20193248-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193248
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193248
    reference: chr 0
allele count: 1
allele frequency: 1.142060963214216e-5
allele num: 87561
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000444837
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  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+34A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+34A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

X-20193255-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193255
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193255
    reference: chr 0
allele count: 2
allele frequency: 2.283391750105607e-5
allele num: 87589
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+27A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  hgvsc: ENST00000544447.1:c.1143+27A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
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site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
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X-20193264-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193264
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193264
    reference: chr 0
allele count: 4
allele frequency: 4.565636735113171e-5
allele num: 87611
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+18T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+18T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
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  hgvsc: ENST00000540702.1:c.1143+18T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+18T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
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site quality: MQRankSum
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X-20193268-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193268
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193268
    reference: chr 0
allele count: 1
allele frequency: 1.141187748208335e-5
allele num: 87628
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+14T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+14T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+14T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+14T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

X-20193273-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193273
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193273
    reference: chr 0
allele count: 1
allele frequency: 1.140745134722e-5
allele num: 87662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+9A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+9A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+9A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+9A>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

X-20193274-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193274
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193274
    reference: chr 0
allele count: 1
allele frequency: 1.140758147865071e-5
allele num: 87661
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+8G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+8G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+8G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+8G>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.1227+8G>T
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

X-20193275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193275
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193275
    reference: chr 0
allele count: 1
allele frequency: 1.140797189075726e-5
allele num: 87658
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+7G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+7G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+7G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+7G>A
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.1227+7G>A
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

X-20193279-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193279
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193279
    reference: chr 0
allele count: 1
allele frequency: 1.140523956705711e-5
allele num: 87679
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1143+3G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1227+3G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1140+3G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1143+3G>A
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 320
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11624
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1227+3G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

X-20193290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193290
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193290
    reference: chr 0
allele count: 5
allele frequency: 5.700864251020455e-5
allele num: 87706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1135A>G
  hgvsp: ENSP00000444837.1:p.Ile379Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1135A>G
  hgvsp: ENSP00000440220.1:p.Ile379Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1132A>G
  hgvsp: ENSP00000368865.4:p.Ile378Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1219A>G
  hgvsp: ENSP00000368884.3:p.Ile407Val
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 20
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile407Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

X-20193297-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193297
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193297
    reference: chr 0
allele count: 28
allele frequency: 3.192301991768421e-4
allele num: 87711
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1128A>G
  hgvsp: ENST00000544447.1:c.1128A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1125A>G
  hgvsp: ENST00000379548.4:c.1125A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1212A>G
  hgvsp: ENST00000379565.3:c.1212A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1128A>G
  hgvsp: ENST00000540702.1:c.1128A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10095
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 27
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hgvs: p.Val404Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

X-20193318-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193318
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193318
    reference: chr 0
allele count: 1
allele frequency: 1.140055862737274e-5
allele num: 87715
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1107A>G
  hgvsp: ENST00000540702.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1107A>G
  hgvsp: ENST00000544447.1:c.1107A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1191A>G
  hgvsp: ENST00000379565.3:c.1191A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1104A>G
  hgvsp: ENST00000379548.4:c.1104A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
hgvs: p.Gln397Gln
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-20193320-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193320
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193320
    reference: chr 0
allele count: 1
allele frequency: 1.140016872249709e-5
allele num: 87718
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1189C>G
  hgvsp: ENSP00000368884.3:p.Gln397Glu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1105C>G
  hgvsp: ENSP00000440220.1:p.Gln369Glu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1102C>G
  hgvsp: ENSP00000368865.4:p.Gln368Glu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1105C>G
  hgvsp: ENSP00000444837.1:p.Gln369Glu
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 604
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3178
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln397Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

X-20193322-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193322
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193322
    reference: chr 0
allele count: 1
allele frequency: 1.140042865611747e-5
allele num: 87716
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1187G>A
  hgvsp: ENSP00000368884.3:p.Ser396Asn
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1100G>A
  hgvsp: ENSP00000368865.4:p.Ser367Asn
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1103G>A
  hgvsp: ENSP00000444837.1:p.Ser368Asn
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1103G>A
  hgvsp: ENSP00000440220.1:p.Ser368Asn
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1217
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 76
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
hgvs: p.Ser396Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

X-20193390-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193390
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193390
    reference: chr 0
allele count: 1
allele frequency: 1.144230219120087e-5
allele num: 87395
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1032A>G
  hgvsp: ENST00000379548.4:c.1032A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1035A>G
  hgvsp: ENST00000544447.1:c.1035A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1119A>G
  hgvsp: ENST00000379565.3:c.1119A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1035A>G
  hgvsp: ENST00000540702.1:c.1035A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11606
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5000
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro373Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

X-20193416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193416
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193416
    reference: chr 0
allele count: 6
allele frequency: 6.941070313042272e-5
allele num: 86442
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-10C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-10C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1016-10C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-10C>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

X-20193416-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193416
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193416
    reference: chr 0
allele count: 1
allele frequency: 1.156845052173712e-5
allele num: 86442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-10C>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-10C>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-10C>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-20193420-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193420
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193420
    reference: chr 0
allele count: 1
allele frequency: 1.159379963595469e-5
allele num: 86253
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-14C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1016-14C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-14C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-14C>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

X-20193443-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193443
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193443
    reference: chr 0
allele count: 1
allele frequency: 1.174605039055618e-5
allele num: 85135
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1016-37C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-37C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-37C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-37C>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
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site quality: MQRankSum
site quality: InbreedingCoeff

X-20193454-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193454
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193454
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 83908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1016-48T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-48T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-48T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-48T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-20193458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020193458
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020193458
    reference: chr 0
allele count: 1
allele frequency: 1.19898326219366e-5
allele num: 83404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1019-52C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1016-52C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1103-52C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1019-52C>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

X-20194323-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194323
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194323
    reference: chr 0
allele count: 1
allele frequency: 1.266784899923993e-5
allele num: 78940
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1102+45T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1018+45T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1018+45T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1015+45T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
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site quality: MQ

X-20194328-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194328
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194328
    reference: chr 0
allele count: 1
allele frequency: 1.263918906962929e-5
allele num: 79119
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1018+40A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1015+40A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1018+40A>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1102+40A>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

X-20194335-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194335
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194335
    reference: chr 0
allele count: 2
allele frequency: 2.512152537902101e-5
allele num: 79613
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1015+33A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1018+33A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1102+33A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1018+33A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
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site quality: BaseQRankSum

X-20194339-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194339
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194339
    reference: chr 0
allele count: 1
allele frequency: 1.2468361532611e-5
allele num: 80203
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1018+29T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1018+29T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1102+29T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1015+29T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7400
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

X-20194370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194370
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194370
    reference: chr 0
allele count: 1
allele frequency: 1.171385397509635e-5
allele num: 85369
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1016A>G
  hgvsp: ENSP00000444837.1:p.Lys339Arg
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1013A>G
  hgvsp: ENSP00000368865.4:p.Lys338Arg
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1100A>G
  hgvsp: ENSP00000368884.3:p.Lys367Arg
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1016A>G
  hgvsp: ENSP00000440220.1:p.Lys339Arg
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10325
  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 321
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys367Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

X-20194372-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194372
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194372
    reference: chr 0
allele count: 4
allele frequency: 4.675355034772953e-5
allele num: 85555
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1014C>G
  hgvsp: ENST00000544447.1:c.1014C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.1011C>G
  hgvsp: ENST00000379548.4:c.1011C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1098C>G
  hgvsp: ENST00000379565.3:c.1098C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1014C>G
  hgvsp: ENST00000540702.1:c.1014C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro366Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-20194384-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194384
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194384
    reference: chr 0
allele count: 1
allele frequency: 1.159245562987608e-5
allele num: 86263
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.999T>C
  hgvsp: ENST00000379548.4:c.999T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1086T>C
  hgvsp: ENST00000379565.3:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.1002T>C
  hgvsp: ENST00000540702.1:c.1002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.1002T>C
  hgvsp: ENST00000544447.1:c.1002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 935
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  variant carriers: 0
hgvs: p.Thr362Thr
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

X-20194387-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194387
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194387
    reference: chr 0
allele count: 1
allele frequency: 1.157822829950561e-5
allele num: 86369
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.999T>C
  hgvsp: ENST00000544447.1:c.999T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.996T>C
  hgvsp: ENST00000379548.4:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1083T>C
  hgvsp: ENST00000379565.3:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.999T>C
  hgvsp: ENST00000540702.1:c.999T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe361Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-20194390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194390
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194390
    reference: chr 0
allele count: 164
allele frequency: 1.896808965892136e-3
allele num: 86461
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1080G>A
  hgvsp: ENST00000379565.3:c.1080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.996G>A
  hgvsp: ENST00000544447.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.993G>A
  hgvsp: ENST00000379548.4:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.996G>A
  hgvsp: ENST00000540702.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
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  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 156
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genotype quality: GenotypeQuality
  all individuals: 2047
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  variant carriers: 3
hgvs: p.Glu360Glu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

X-20194404-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194404
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194404
    reference: chr 0
allele count: 1
allele frequency: 1.152432208175354e-5
allele num: 86773
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.982T>C
  hgvsp: ENSP00000440220.1:p.Tyr328His
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1066T>C
  hgvsp: ENSP00000368884.3:p.Tyr356His
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.982T>C
  hgvsp: ENSP00000444837.1:p.Tyr328His
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.979T>C
  hgvsp: ENSP00000368865.4:p.Tyr327His
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1313
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hgvs: p.Tyr356His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-20194426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194426
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194426
    reference: chr 0
allele count: 4
allele frequency: 4.609569466211856e-5
allele num: 86776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.960G>A
  hgvsp: ENST00000540702.1:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.957G>A
  hgvsp: ENST00000379548.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1044G>A
  hgvsp: ENST00000379565.3:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.960G>A
  hgvsp: ENST00000544447.1:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 226
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  variant carriers: 0
hgvs: p.Thr348Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-20194444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194444
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194444
    reference: chr 0
allele count: 3
allele frequency: 3.468248187840322e-5
allele num: 86499
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.942G>A
  hgvsp: ENST00000544447.1:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.942G>A
  hgvsp: ENST00000540702.1:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1026G>A
  hgvsp: ENST00000379565.3:c.1026G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.939G>A
  hgvsp: ENST00000379548.4:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 120
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1308
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 31
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genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro342Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

X-20194447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194447
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194447
    reference: chr 0
allele count: 41
allele frequency: 4.741748201605255e-4
allele num: 86466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.936T>C
  hgvsp: ENST00000379548.4:c.936T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.939T>C
  hgvsp: ENST00000540702.1:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1023T>C
  hgvsp: ENST00000379565.3:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.939T>C
  hgvsp: ENST00000544447.1:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
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genotype depth: GenotypeDepth
  all individuals: 307
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2424
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 6
genotype depth: GenotypeDepth
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  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 514
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genotype depth: GenotypeDepth
  all individuals: 121
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2463
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genotype depth: GenotypeDepth
  all individuals: 727
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 191
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2524
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genotype quality: GenotypeQuality
  all individuals: 2022
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genotype quality: GenotypeQuality
  all individuals: 383
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 923
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genotype quality: GenotypeQuality
  all individuals: 11
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 127
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genotype quality: GenotypeQuality
  all individuals: 586
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His341His
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-20194475-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194475
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194476
    reference: chr 0
allele count: 1
allele frequency: 1.198351068929154e-5
allele num: 83448
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-6dupC
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-6dupC
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-6dupC
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-6dupC
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 306
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6332
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 514
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 624
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
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genotype quality: GenotypeQuality
  all individuals: 1301
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7514
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1000-6dupC
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

X-20194478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194478
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194478
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 83374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-8C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-8C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-8C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-8C>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16572
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
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genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 722
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4233
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1000-8C>T
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-20194479-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194479
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194480
    reference: chr 0
allele count: 114
allele frequency: 2.326483132997286e-3
allele num: 49001
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-10dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-10dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-10dupT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-10dupT
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 1.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 2.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 4.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 7.5e0
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 16961
  bin: 2.5e0
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 3.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 3.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 1.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 1.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 5392
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 4.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 2.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.75e1
  variant carriers: 4
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

X-20194479-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194479
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194478
    reference: chr 0
allele count: 2671
allele frequency: 5.450909165119079e-2
allele num: 49001
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-10delT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-10delT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-10delT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-10delT
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 3.75e1
  variant carriers: 638
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 4.25e1
  variant carriers: 320
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 1.75e1
  variant carriers: 1081
genotype depth: GenotypeDepth
  all individuals: 425
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 2.25e1
  variant carriers: 1315
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 818
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 5.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.75e1
  variant carriers: 1195
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 1.25e1
  variant carriers: 465
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 9.75e1
  variant carriers: 613
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 216
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 5.75e1
  variant carriers: 277
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 8.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 6.75e1
  variant carriers: 196
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 5.25e1
  variant carriers: 382
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 3.25e1
  variant carriers: 574
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 7.5e0
  variant carriers: 428
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 1.75e1
  variant carriers: 568
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 7.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 2.75e1
  variant carriers: 559
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 4.75e1
  variant carriers: 443
genotype quality: GenotypeQuality
  all individuals: 5392
  bin: 6.25e1
  variant carriers: 192
genotype quality: GenotypeQuality
  all individuals: 16961
  bin: 2.5e0
  variant carriers: 343
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 1.25e1
  variant carriers: 477
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 9.75e1
  variant carriers: 877
genotype quality: GenotypeQuality
  all individuals: 361
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  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 4.25e1
  variant carriers: 476
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: GA
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

X-20194479-GAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194479
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194477
    reference: chr 0
allele count: 14
allele frequency: 2.857084549294912e-4
allele num: 49001
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-11_916-10delTT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-11_916-10delTT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-11_913-10delTT
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-11_1000-10delTT
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 3
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 7
genotype quality: GenotypeQuality
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  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: GAA
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

X-20194480-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194480
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194480
    reference: chr 0
allele count: 3
allele frequency: 7.808026651397637e-5
allele num: 38422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-10T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-10T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-10T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-10T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6948
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14584
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

X-20194481-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194481
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194481
    reference: chr 0
allele count: 3
allele frequency: 5.778899312310982e-5
allele num: 51913
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-11T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-11T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-11T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-11T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-20194488-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194488
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194488
    reference: chr 0
allele count: 1
allele frequency: 1.268633047890898e-5
allele num: 78825
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.1000-18T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.913-18T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.916-18T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.916-18T>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

X-20194544-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194544
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194544
    reference: chr 0
allele count: 1
allele frequency: 1.349054312926638e-5
allele num: 74126
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.999+8T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.915+8T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.912+8T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.915+8T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
hgvs: c.999+8T>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

X-20194564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194564
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194564
    reference: chr 0
allele count: 1
allele frequency: 1.328091797705057e-5
allele num: 75296
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.987G>A
  hgvsp: ENST00000379565.3:c.987G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.903G>A
  hgvsp: ENST00000540702.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.900G>A
  hgvsp: ENST00000379548.4:c.900G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.903G>A
  hgvsp: ENST00000544447.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Thr329Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-20194565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194565
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194565
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 75409
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.899C>T
  hgvsp: ENSP00000368865.4:p.Thr300Met
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.986C>T
  hgvsp: ENSP00000368884.3:p.Thr329Met
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.902C>T
  hgvsp: ENSP00000444837.1:p.Thr301Met
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.902C>T
  hgvsp: ENSP00000440220.1:p.Thr301Met
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4817
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr329Met
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

X-20194567-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194567
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194567
    reference: chr 0
allele count: 1
allele frequency: 1.323977227591685e-5
allele num: 75530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.900A>G
  hgvsp: ENST00000540702.1:c.900A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.897A>G
  hgvsp: ENST00000379548.4:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.984A>G
  hgvsp: ENST00000379565.3:c.984A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.900A>G
  hgvsp: ENST00000544447.1:c.900A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1352
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  variant carriers: 0
hgvs: p.Ser328Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

X-20194577-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194577
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194577
    reference: chr 0
allele count: 1
allele frequency: 1.317939796510095e-5
allele num: 75876
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.974C>T
  hgvsp: ENSP00000368884.3:p.Ser325Leu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.890C>T
  hgvsp: ENSP00000440220.1:p.Ser297Leu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.890C>T
  hgvsp: ENSP00000444837.1:p.Ser297Leu
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.887C>T
  hgvsp: ENSP00000368865.4:p.Ser296Leu
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser325Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

X-20194625-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194625
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194625
    reference: chr 0
allele count: 2
allele frequency: 2.769124264451367e-5
allele num: 72225
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.848-9T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.935-9T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.851-9T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.851-9T>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

X-20194637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194637
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194637
    reference: chr 0
allele count: 6
allele frequency: 8.503642393491879e-5
allele num: 70558
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.935-21C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.851-21C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.851-21C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.848-21C>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
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site quality: ClippingRankSum

X-20194640-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194640
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194640
    reference: chr 0
allele count: 5
allele frequency: 7.11176855460416e-5
allele num: 70306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
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  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.851-24T>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
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X-20194653-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020194653
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020194653
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 68066
alternate allele: C
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000177189
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  hgvsc: ENST00000544447.1:c.851-37C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.848-37C>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000177189
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
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site quality: MQRankSum
site quality: FS
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X-20195073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195073
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195073
    reference: chr 0
allele count: 1
allele frequency: 1.200033600940826e-5
allele num: 83331
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.934+41G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.847+41G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
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  hgvsc: ENST00000544447.1:c.850+41G>A
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
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population: Latino
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reference allele: C
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site quality: QD
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X-20195083-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195083
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195083
    reference: chr 0
allele count: 7
allele frequency: 8.336906293173264e-5
allele num: 83964
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl protein: ENSP00000440220
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
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X-20195098-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195098
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195098
    reference: chr 0
allele count: 1
allele frequency: 1.171920778155397e-5
allele num: 85330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
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genotype quality: GenotypeQuality
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population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
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population: Other
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X-20195107-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195107
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195107
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allele count: 1
allele frequency: 1.159057454478018e-5
allele num: 86277
alternate allele: G
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  gene symbol: RPS6KA3
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
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population: Latino
population: European (Non-Finnish)
population: African
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population: East Asian
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X-20195124-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195124
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195124
    reference: chr 0
allele count: 1
allele frequency: 1.144243311897842e-5
allele num: 87394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.840A>G
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ala308Ala
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population: South Asian
population: African
population: European (Finnish)
population: Other
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population: Latino
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reference allele: T
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X-20195130-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195130
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195130
    reference: chr 0
allele count: 1
allele frequency: 1.143079226821211e-5
allele num: 87483
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.834T>C
  hgvsp: ENST00000540702.1:c.834T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
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  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/10432
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  variant of: http://identifiers.org/hgnc/10432
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 40
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genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn306Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

X-20195163-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195163
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195163
    reference: chr 0
allele count: 1
allele frequency: 1.142334932602239e-5
allele num: 87540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.801G>T
  hgvsp: ENST00000540702.1:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.885G>T
  hgvsp: ENST00000379565.3:c.885G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.798G>T
  hgvsp: ENST00000379548.4:c.798G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.801G>T
  hgvsp: ENST00000544447.1:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala295Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

X-20195163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195163
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195163
    reference: chr 0
allele count: 4
allele frequency: 4.569339730408956e-5
allele num: 87540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.801G>A
  hgvsp: ENST00000544447.1:c.801G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.885G>A
  hgvsp: ENST00000379565.3:c.885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.798G>A
  hgvsp: ENST00000379548.4:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.801G>A
  hgvsp: ENST00000540702.1:c.801G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala295Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-20195164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195164
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195164
    reference: chr 0
allele count: 3
allele frequency: 3.427004797806717e-5
allele num: 87540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.800C>T
  hgvsp: ENSP00000444837.1:p.Ala267Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.797C>T
  hgvsp: ENSP00000368865.4:p.Ala266Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.884C>T
  hgvsp: ENSP00000368884.3:p.Ala295Val
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.800C>T
  hgvsp: ENSP00000440220.1:p.Ala267Val
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala295Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
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X-20195208-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195208
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195208
    reference: chr 0
allele count: 4
allele frequency: 4.600927086807992e-5
allele num: 86939
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.762-6A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.759-6A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.762-6A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.846-6A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.846-6A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-20195237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195237
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195237
    reference: chr 0
allele count: 4
allele frequency: 4.682250757939341e-5
allele num: 85429
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.846-35C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.759-35C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.762-35C>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.762-35C>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
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site quality: VQSLOD

X-20195245-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195245
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195245
    reference: chr 0
allele count: 1
allele frequency: 1.190447846479846e-5
allele num: 84002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.762-43G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.759-43G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.762-43G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.846-43G>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

X-20195253-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020195253
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020195253
    reference: chr 0
allele count: 1
allele frequency: 1.216915120170368e-5
allele num: 82175
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.762-51A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.846-51A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000177189
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.759-51A>G
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.762-51A>G
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
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X-20204390-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020204390
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020204390
    reference: chr 0
allele count: 2
allele frequency: 2.294156782674528e-5
allele num: 87178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.761+24G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.845+24G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
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  ensembl protein: ENSP00000368865
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  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.758+24G>T
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
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  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.761+24G>T
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
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genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

X-20204391-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020204391
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020204391
    reference: chr 0
allele count: 1
allele frequency: 1.146841598238451e-5
allele num: 87196
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.845+23T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.761+23T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.758+23T>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.761+23T>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7303
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

X-20204393-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020204393
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020204393
    reference: chr 0
allele count: 1
allele frequency: 1.146526026140793e-5
allele num: 87220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.758+21G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.761+21G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.761+21G>C
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.845+21G>C
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7314
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12002
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3506
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-20204393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24020204393
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24020204393
    reference: chr 0
allele count: 1
allele frequency: 1.146526026140793e-5
allele num: 87220
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368884
  ensembl transcript: ENST00000379565
  gene symbol: RPS6KA3
  hgvsc: ENST00000379565.3:c.845+21G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000368865
  ensembl transcript: ENST00000379548
  gene symbol: RPS6KA3
  hgvsc: ENST00000379548.4:c.758+21G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000444837
  ensembl transcript: ENST00000540702
  gene symbol: RPS6KA3
  hgvsc: ENST00000540702.1:c.761+21G>A
  variant of: http://identifiers.org/hgnc/10432
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177189
  ensembl protein: ENSP00000440220
  ensembl transcript: ENST00000544447
  gene symbol: RPS6KA3
  hgvsc: ENST00000544447.1:c.761+21G>A
  variant of: http://identifiers.org/hgnc/10432
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 597
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.211215283920042e-5
allele num: 45224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.073120369245718e-4
allele num: 8233
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6495
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

DP
type: SiteQuality
SIO_000300: 1.415491e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

QD
type: SiteQuality
SIO_000300: 1.535e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 7.048e0

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.106317070472397e-4
allele num: 9039
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.31923220685561e-4
allele num: 45481
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4387
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.21447656060238e-4
allele num: 8234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.88e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.74e0

DP
type: SiteQuality
SIO_000300: 1.422422e6

QD
type: SiteQuality
SIO_000300: 1.458e1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.79e-1

FS
type: SiteQuality
SIO_000300: 2.464e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.75e-1

GenotypeQuality
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4830
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6523
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.401e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.427245e6

VQSLOD
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 6.016e0

GenotypeQuality
all individuals: 458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46043
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.528818223513224e-4
allele num: 6541
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4421
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9103
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.627e0

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 1.432405e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 9.02e0

GenotypeQuality
all individuals: 1218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4425
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46069
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.043405676126878e-4
allele num: 9584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.709e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.211e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 1.429794e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.213e0

GenotypeQuality
all individuals: 1631
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.16277007591323e-5
allele num: 46237
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8183
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6551
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

FS
type: SiteQuality
SIO_000300: 3.257e0

DP
type: SiteQuality
SIO_000300: 1.4147e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.427e1

GenotypeQuality
all individuals: 1207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8121
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.325633705337832e-5
allele num: 46236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9127
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.06e-2

DP
type: SiteQuality
SIO_000300: 1.398726e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

FS
type: SiteQuality
SIO_000300: 1.295e0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.692e1

GenotypeQuality
all individuals: 1238
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26188
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17633219621221e-4
allele num: 8501
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6603
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.085727e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.995e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.724e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
all individuals: 2344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 7055
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47848
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.9147332936744e-5
allele num: 10086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9297
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.086569e6

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.487e1

GenotypeQuality
all individuals: 2469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3189
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1894
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10097
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088075003654131e-5
allele num: 47891
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.097668e6

FS
type: SiteQuality
SIO_000300: 9.435e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.16e0

VQSLOD
type: SiteQuality
SIO_000300: -5.501e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeQuality
all individuals: 29698
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10107
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.174929548063877e-5
allele num: 47905
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.031e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.02e-2

DP
type: SiteQuality
SIO_000300: 2.101916e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.91e0

QD
type: SiteQuality
SIO_000300: 1.547e1

GenotypeQuality
all individuals: 7016
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.526507581991301e-4
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074806534823732e-4
allele num: 9304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47917
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.426e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.106357e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

FS
type: SiteQuality
SIO_000300: 2.111e0

QD
type: SiteQuality
SIO_000300: 1.829e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.73e-2

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086637175527919e-5
allele num: 47924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e0

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

FS
type: SiteQuality
SIO_000300: 5.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.218e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

DP
type: SiteQuality
SIO_000300: 2.108005e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 2.123e1

GenotypeQuality
all individuals: 1892
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085679723021733e-5
allele num: 47946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9309
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6625
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.247e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 1.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.109175e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1893
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7045
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.887284951552304e-5
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47947
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9309
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.109502e6

QD
type: SiteQuality
SIO_000300: 3.098e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.13e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.559e-1

MQ
type: SiteQuality
SIO_000300: 5.886e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30608
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.887284951552304e-5
allele num: 10114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47945
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.254e1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.10986e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085244807740429e-5
allele num: 47956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.126e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.937e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

DP
type: SiteQuality
SIO_000300: 2.110456e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3183
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11623
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele count: 5
allele frequency: 5.87406015037594e-4
allele num: 8512
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.373e-1

VQSLOD
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.002e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 26

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
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allele frequency: 3.164556962025316e-3
allele num: 632
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10119
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084288632289799e-5
allele num: 47978
num of homozygotes: 0

Latino
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allele count: 25
allele frequency: 2.684419628476323e-3
allele num: 9313
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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QD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084288632289799e-5
allele num: 47978
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9317
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8515
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.032e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9317
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.886307464162135e-5
allele num: 10115
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6630
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47980
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MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084245190604223e-5
allele num: 47979
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.77e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.112247e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47812
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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East Asian
type: Population
allele count: 0
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Latino
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allele frequency: 0.0e0
allele num: 9279
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4522
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South Asian
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allele frequency: 9.940357852882704e-5
allele num: 10060
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.100216e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.24e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 5
allele frequency: 5.03220611916264e-4
allele num: 9936
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.116760509715931e-5
allele num: 47242
num of homozygotes: 0

African
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East Asian
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allele count: 0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9200
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4495
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 2.03926e6

VQSLOD
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.99e-2

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.301e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 9936
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 47242
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European (Finnish)
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East Asian
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allele num: 6505
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Other
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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DP
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 47128
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Other
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East Asian
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allele num: 6482
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MQ
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 46482
num of homozygotes: 0

African
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East Asian
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South Asian
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Other
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DP
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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MQ
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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DP
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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East Asian
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DP
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QD
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BaseQRankSum
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MQRankSum
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6616
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9135
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8765
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8033
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.357267455565508e-5
allele num: 42422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

DP
type: SiteQuality
SIO_000300: 1.548193e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.27e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.41e-1

GenotypeQuality
all individuals: 1749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
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variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 577
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8807
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6061
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8059
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.679895170348185e-5
allele num: 42736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4205
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.094e0

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.522e1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.5954e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.532e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7637
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4221
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.317443396445042e-5
allele num: 43151
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8091
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8839
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9209
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.630096e6

QD
type: SiteQuality
SIO_000300: 2.444e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.041e-1

MQ
type: SiteQuality
SIO_000300: 5.707e1

GenotypeQuality
all individuals: 1945
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7651
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9715
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9195
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4445
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.149751703678225e-5
allele num: 46517
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6517
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -5.265e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.531e1

DP
type: SiteQuality
SIO_000300: 1.782493e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.148e0

GenotypeQuality
all individuals: 4911
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.575777715841606e-5
allele num: 46643
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4455
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.788447e6

FS
type: SiteQuality
SIO_000300: 2.413e0

QD
type: SiteQuality
SIO_000300: 2.062e1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.337e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.806e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.55e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7650
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8405
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9251
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9851
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.123548024038564e-5
allele num: 47091
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.23e-2

QD
type: SiteQuality
SIO_000300: 2.781e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.806509e6

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 2592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.080613788631943e-4
allele num: 9254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4483
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8413
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47161
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.053e0

DP
type: SiteQuality
SIO_000300: 1.809363e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.053e0

FS
type: SiteQuality
SIO_000300: 1.0053e1

QD
type: SiteQuality
SIO_000300: 1.695e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 1311
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5066
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1348
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 7.556131260794474e-4
allele num: 9264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6569
num of homozygotes: 0

African
type: Population
allele count: 154
allele frequency: 1.831371149958378e-2
allele num: 8409
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4485
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.352432981832041e-5
allele num: 47226
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.083e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.579e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.227e0

DP
type: SiteQuality
SIO_000300: 1.817866e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.207e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

GenotypeQuality
all individuals: 159
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5113
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.107614812316901e-5
allele num: 47447
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8419
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.821037e6

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.98e-2

QD
type: SiteQuality
SIO_000300: 2.554e1

GenotypeQuality
all individuals: 2038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36293
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6583
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.428150021070375e-5
allele num: 47460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.820982e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.673e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.53e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.887e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 2.185e1

GenotypeQuality
all individuals: 7652
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.114299004165169e-5
allele num: 47297
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8303
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.006339941632283e-4
allele num: 9937
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4494
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.079097874177188e-4
allele num: 9267
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

FS
type: SiteQuality
SIO_000300: 1.001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

QD
type: SiteQuality
SIO_000300: 1.473e1

DP
type: SiteQuality
SIO_000300: 1.802062e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3092
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33968
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 4
allele frequency: 4.317323259579061e-4
allele num: 9265
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9941
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 34
allele frequency: 4.097866698806798e-3
allele num: 8297
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.346385733324872e-5
allele num: 47271
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

FS
type: SiteQuality
SIO_000300: 2.212e0

VQSLOD
type: SiteQuality
SIO_000300: 6.13e0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

QD
type: SiteQuality
SIO_000300: 1.612e1

DP
type: SiteQuality
SIO_000300: 1.797614e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.977e-1

GenotypeQuality
all individuals: 1819
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
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variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9147
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45381
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.030184403008138e-4
allele num: 9707
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

QD
type: SiteQuality
SIO_000300: 2.136e1

DP
type: SiteQuality
SIO_000300: 1.714702e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.111e0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e0

GenotypeQuality
all individuals: 2504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14355
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6331
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4381
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45331
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9697
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.085e0

VQSLOD
type: SiteQuality
SIO_000300: -4.025e0

MQRankSum
type: SiteQuality
SIO_000300: -1.999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.199e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.716482e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 3.211e1

GenotypeQuality
all individuals: 1318
bin: 5.25e1
variant carriers: 20

GenotypeQuality
all individuals: 7986
bin: 2.25e1
variant carriers: 88

GenotypeQuality
all individuals: 1380
bin: 6.75e1
variant carriers: 4

Latino
type: Population
allele count: 18
allele frequency: 3.577817531305903e-3
allele num: 5031
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 62
allele frequency: 2.347862309236187e-3
allele num: 26407
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.825928180158247e-3
allele num: 4929
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 2.494456762749446e-3
allele num: 3608
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 2.725259751320048e-3
allele num: 5871
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 341
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

DP
type: SiteQuality
SIO_000300: 2.149124e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

QD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 2407
bin: 3.75e1
variant carriers: 586

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 71

GenotypeQuality
all individuals: 7986
bin: 2.25e1
variant carriers: 576

European (Finnish)
type: Population
allele count: 83
allele frequency: 2.94953802416489e-2
allele num: 2814
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 4.69208211143695e-2
allele num: 341
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1522
allele frequency: 5.763623281705609e-2
allele num: 26407
num of homozygotes: 0

South Asian
type: Population
allele count: 145
allele frequency: 2.469766649633793e-2
allele num: 5871
num of homozygotes: 0

African
type: Population
allele count: 297
allele frequency: 6.025562994522216e-2
allele num: 4929
num of homozygotes: 0

East Asian
type: Population
allele count: 267
allele frequency: 7.400221729490022e-2
allele num: 3608
num of homozygotes: 0

Latino
type: Population
allele count: 341
allele frequency: 6.777976545418406e-2
allele num: 5031
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.149124e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 361
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 701
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 524
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 2
allele frequency: 3.40657468915006e-4
allele num: 5871
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 3.029499753853145e-4
allele num: 26407
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 7.95070562512423e-4
allele num: 5031
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4929
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 341
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

QD
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

DP
type: SiteQuality
SIO_000300: 2.149124e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e-1

GenotypeQuality
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7976
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5660
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2605
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4049
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.521432173474534e-4
allele num: 3966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3741
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.54380606986066e-5
allele num: 20956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2843
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

DP
type: SiteQuality
SIO_000300: 1.509703e6

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: -4.389e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-2

FS
type: SiteQuality
SIO_000300: 3.329e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

GenotypeQuality
all individuals: 750
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2895
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5477
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.615067601764153e-5
allele num: 27662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5139
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 377
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2957
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.041825095057034e-4
allele num: 6575
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.726e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 2.313e1

VQSLOD
type: SiteQuality
SIO_000300: -2.027e0

DP
type: SiteQuality
SIO_000300: 1.915125e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.86e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.254e0

GenotypeQuality
all individuals: 273
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.321702352630188e-4
allele num: 7566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4155
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.01e0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 2.883e1

DP
type: SiteQuality
SIO_000300: 1.523578e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

GenotypeQuality
all individuals: 1342
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.381978993919292e-4
allele num: 7236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8563
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5651
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-1

FS
type: SiteQuality
SIO_000300: 5.267e0

QD
type: SiteQuality
SIO_000300: 1.71e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

DP
type: SiteQuality
SIO_000300: 1.457898e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

GenotypeQuality
all individuals: 747
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5801
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8665
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 3.227e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.503009e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 1130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8617
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 557
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8671
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.506286e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.565e1

GenotypeQuality
all individuals: 1139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 520
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7489
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8683
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3937
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.474757473767571e-5
allele num: 40408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5829
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.507806e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.0e-2

QD
type: SiteQuality
SIO_000300: 1.27e1

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

FS
type: SiteQuality
SIO_000300: 9.412000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 1138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.462265776967966e-5
allele num: 40613
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5853
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7560
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.069e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

QD
type: SiteQuality
SIO_000300: 9.6e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

DP
type: SiteQuality
SIO_000300: 1.52271e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5625
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.41925728801258e-4
allele num: 8267
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 535
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8373
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38439
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

DP
type: SiteQuality
SIO_000300: 1.423674e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

FS
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8229
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.602392906740733e-4
allele num: 37444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3647
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7119
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8107
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.356835e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.903e0

FS
type: SiteQuality
SIO_000300: 7.742e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3637
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.040270346381301e-4
allele num: 7102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37287
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5469
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8087
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.335063e6

QD
type: SiteQuality
SIO_000300: 1.856e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5285
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35901
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6919
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8017
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.250052e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.167e0

QD
type: SiteQuality
SIO_000300: 2.806e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8193
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.104240282685512e-4
allele num: 9056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45078
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 1.69574e6

QD
type: SiteQuality
SIO_000300: 1.536e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.325e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9837
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8233
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9107
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.12637981527371e-3
allele num: 4439
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.399181752194092e-5
allele num: 45463
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.857e0

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.54e-1

DP
type: SiteQuality
SIO_000300: 1.740508e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.39e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

FS
type: SiteQuality
SIO_000300: 1.128e0

QD
type: SiteQuality
SIO_000300: 2.827e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6419
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4465
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8301
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46388
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.006441223832528e-4
allele num: 9936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.095e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

QD
type: SiteQuality
SIO_000300: 1.732e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.815643e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.12598592597317e-5
allele num: 47037
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4493
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

DP
type: SiteQuality
SIO_000300: 1.84574e6

VQSLOD
type: SiteQuality
SIO_000300: 8.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 1.526e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.889240506329114e-5
allele num: 10112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6611
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9299
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47794
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.288e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.489e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47845
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
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South Asian
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allele count: 1
allele frequency: 9.882399446585631e-5
allele num: 10119
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.072e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.025e0

DP
type: SiteQuality
SIO_000300: 1.878183e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47876
num of homozygotes: 0

Latino
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allele frequency: 1.073537305421363e-4
allele num: 9315
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 8.019e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.316e-1

DP
type: SiteQuality
SIO_000300: 1.880442e6

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47876
num of homozygotes: 0

Latino
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allele frequency: 2.147074610842727e-4
allele num: 9315
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 1.975894092076665e-4
allele num: 10122
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.880442e6

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.316e-1

FS
type: SiteQuality
SIO_000300: 8.019e0

QD
type: SiteQuality
SIO_000300: 1.667e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8441
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9315
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.266318537859008e-5
allele num: 47875
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 2.248e1

FS
type: SiteQuality
SIO_000300: 2.962e0

VQSLOD
type: SiteQuality
SIO_000300: -1.043e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.880211e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 31866
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.411843876177658e-5
allele num: 47552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8197
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6619
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.865293e6

MQRankSum
type: SiteQuality
SIO_000300: -1.254e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.69e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.471e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

FS
type: SiteQuality
SIO_000300: 4.769e0

QD
type: SiteQuality
SIO_000300: 2.171e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

GenotypeQuality
all individuals: 5631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10399
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 24348
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.287664177182591e-4
allele num: 7766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6533
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.432660762913567e-5
allele num: 46637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10081
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.579e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.103e0

DP
type: SiteQuality
SIO_000300: 1.787986e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.302e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 1037
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5245
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9249
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6459
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.185553491421703e-5
allele num: 45755
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.222e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.745951e6

QD
type: SiteQuality
SIO_000300: 3.035e1

GenotypeQuality
all individuals: 10394
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1231
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4465
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44507
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.590836780146357e-4
allele num: 6286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7164
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.284e1

DP
type: SiteQuality
SIO_000300: 1.737752e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.075e0

MQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

GenotypeQuality
all individuals: 1805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12004
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3494
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6551
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.197624144734081e-5
allele num: 47646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.629e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.94e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.417e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.248853e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.174e0

GenotypeQuality
all individuals: 3504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12006
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8463
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10087
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4513
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.07654214662504e-4
allele num: 9289
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47659
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

FS
type: SiteQuality
SIO_000300: 9.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.679e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

DP
type: SiteQuality
SIO_000300: 2.250035e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 2531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.524157902758726e-4
allele num: 6561
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10089
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.738e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

FS
type: SiteQuality
SIO_000300: 3.027e0

QD
type: SiteQuality
SIO_000300: 1.794e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.252208e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.031e0