X-101971615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971615
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971615
    reference: chr 0
allele count: 1
allele frequency: 1.143079226821211e-5
allele num: 87483
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1818C>T
  hgvsp: ENST00000332262.5:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1818C>T
  hgvsp: ENST00000543253.1:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1818C>T
  hgvsp: ENST00000535209.1:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7114
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp606Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-101971615-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971615
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971615
    reference: chr 0
allele count: 1
allele frequency: 1.143079226821211e-5
allele num: 87483
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1818C>A
  hgvsp: ENSP00000437872.1:p.Asp606Glu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1818C>A
  hgvsp: ENSP00000437394.1:p.Asp606Glu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1818C>A
  hgvsp: ENSP00000339057.3:p.Asp606Glu
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp606Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

X-101971622-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971622
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971622
    reference: chr 0
allele count: 1
allele frequency: 1.142870204230906e-5
allele num: 87499
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1825C>T
  hgvsp: ENSP00000437872.1:p.Arg609Trp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1825C>T
  hgvsp: ENSP00000437394.1:p.Arg609Trp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1825C>T
  hgvsp: ENSP00000339057.3:p.Arg609Trp
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg609Trp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

X-101971630-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971630
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971630
    reference: chr 0
allele count: 2
allele frequency: 2.285505325227408e-5
allele num: 87508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1833T>A
  hgvsp: ENST00000332262.5:c.1833T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1833T>A
  hgvsp: ENST00000543253.1:c.1833T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1833T>A
  hgvsp: ENST00000535209.1:c.1833T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro611Pro
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

X-101971654-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971654
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971654
    reference: chr 0
allele count: 6
allele frequency: 6.851739770923501e-5
allele num: 87569
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1857T>C
  hgvsp: ENST00000543253.1:c.1857T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1857T>C
  hgvsp: ENST00000332262.5:c.1857T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1857T>C
  hgvsp: ENST00000535209.1:c.1857T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18155
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13170
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13170
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile619Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

X-101971674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971674
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971674
    reference: chr 0
allele count: 12
allele frequency: 1.370191484259925e-4
allele num: 87579
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1877C>T
  hgvsp: ENSP00000339057.3:p.Ala626Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1877C>T
  hgvsp: ENSP00000437872.1:p.Ala626Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1877C>T
  hgvsp: ENSP00000437394.1:p.Ala626Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 13165
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27783
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala626Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-101971688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971688
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971688
    reference: chr 0
allele count: 1
allele frequency: 1.141813199360585e-5
allele num: 87580
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1891C>T
  hgvsp: ENSP00000437872.1:p.Arg631Ter
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1891C>T
  hgvsp: ENSP00000339057.3:p.Arg631Ter
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1891C>T
  hgvsp: ENSP00000437394.1:p.Arg631Ter
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 4751
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2336
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genotype quality: GenotypeQuality
  all individuals: 341
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg631Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-101971724-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971724
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971724
    reference: chr 0
allele count: 1
allele frequency: 1.141304968100526e-5
allele num: 87619
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1927A>G
  hgvsp: ENSP00000339057.3:p.Ile643Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1927A>G
  hgvsp: ENSP00000437394.1:p.Ile643Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1927A>G
  hgvsp: ENSP00000437872.1:p.Ile643Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28101
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genotype quality: GenotypeQuality
  all individuals: 2496
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile643Val
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ

X-101971745-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971745
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971745
    reference: chr 0
allele count: 1
allele frequency: 1.141344046749452e-5
allele num: 87616
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1948C>T
  hgvsp: ENSP00000437872.1:p.Pro650Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1948C>T
  hgvsp: ENSP00000339057.3:p.Pro650Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1948C>T
  hgvsp: ENSP00000437394.1:p.Pro650Ser
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13151
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 28587
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro650Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

X-101971749-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971749
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971749
    reference: chr 0
allele count: 1
allele frequency: 1.14148735802751e-5
allele num: 87605
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1952C>T
  hgvsp: ENSP00000339057.3:p.Ser651Phe
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1952C>T
  hgvsp: ENSP00000437394.1:p.Ser651Phe
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1952C>T
  hgvsp: ENSP00000437872.1:p.Ser651Phe
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28737
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser651Phe
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

X-101971767-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971767
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971768
    reference: chr 0
allele count: 2
allele frequency: 2.285792655748197e-5
allele num: 87497
alternate allele: GC
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1970_1971insC
  hgvsp: ENSP00000437872.1:p.Leu659PhefsTer18
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1970_1971insC
  hgvsp: ENSP00000339057.3:p.Leu659PhefsTer18
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1970_1971insC
  hgvsp: ENSP00000437394.1:p.Leu659PhefsTer18
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 360
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2995
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1141
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 98
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu659PhefsTer18
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

X-101971768-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971768
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971768
    reference: chr 0
allele count: 1
allele frequency: 1.143209904770615e-5
allele num: 87473
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1971T>G
  hgvsp: ENSP00000437394.1:p.Ser657Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1971T>G
  hgvsp: ENSP00000339057.3:p.Ser657Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1971T>G
  hgvsp: ENSP00000437872.1:p.Ser657Arg
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 2416
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genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 403
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 169
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser657Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

X-101971782-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971782
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971782
    reference: chr 0
allele count: 2
allele frequency: 2.297292640623026e-5
allele num: 87059
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1985T>C
  hgvsp: ENSP00000437872.1:p.Met662Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1985T>C
  hgvsp: ENSP00000339057.3:p.Met662Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1985T>C
  hgvsp: ENSP00000437394.1:p.Met662Thr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27825
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met662Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-101971787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971787
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971787
    reference: chr 0
allele count: 1
allele frequency: 1.151596112211525e-5
allele num: 86836
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1990C>T
  hgvsp: ENSP00000437872.1:p.His664Tyr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1990C>T
  hgvsp: ENSP00000437394.1:p.His664Tyr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1990C>T
  hgvsp: ENSP00000339057.3:p.His664Tyr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13149
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His664Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

X-101971790-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971790
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971790
    reference: chr 0
allele count: 1
allele frequency: 1.151622636294539e-5
allele num: 86834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1993A>G
  hgvsp: ENSP00000339057.3:p.Met665Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1993A>G
  hgvsp: ENSP00000437394.1:p.Met665Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1993A>G
  hgvsp: ENSP00000437872.1:p.Met665Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6534
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met665Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

X-101971793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971793
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971793
    reference: chr 0
allele count: 1
allele frequency: 1.15350897429982e-5
allele num: 86692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.1996G>A
  hgvsp: ENSP00000339057.3:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.1996G>A
  hgvsp: ENSP00000437872.1:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.1996G>A
  hgvsp: ENSP00000437394.1:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13149
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6527
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 27271
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala666Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-101971798-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971798
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971798
    reference: chr 0
allele count: 1
allele frequency: 1.156136192843517e-5
allele num: 86495
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2001A>G
  hgvsp: ENST00000543253.1:c.2001A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2001A>G
  hgvsp: ENST00000332262.5:c.2001A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2001A>G
  hgvsp: ENST00000535209.1:c.2001A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1870
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro667Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

X-101971809-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971809
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971809
    reference: chr 0
allele count: 1
allele frequency: 1.16048322521498e-5
allele num: 86171
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2012A>C
  hgvsp: ENSP00000437872.1:p.Asn671Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2012A>C
  hgvsp: ENSP00000339057.3:p.Asn671Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2012A>C
  hgvsp: ENSP00000437394.1:p.Asn671Thr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn671Thr
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-101971831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971831
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971831
    reference: chr 0
allele count: 1
allele frequency: 1.170014859188712e-5
allele num: 85469
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2034C>T
  hgvsp: ENST00000332262.5:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2034C>T
  hgvsp: ENST00000535209.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2034C>T
  hgvsp: ENST00000543253.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16761
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2308
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6399
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  variant carriers: 0
hgvs: p.Phe678Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

X-101971832-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971832
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971832
    reference: chr 0
allele count: 1
allele frequency: 1.169809555004445e-5
allele num: 85484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2035A>G
  hgvsp: ENSP00000437394.1:p.Ile679Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2035A>G
  hgvsp: ENSP00000339057.3:p.Ile679Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2035A>G
  hgvsp: ENSP00000437872.1:p.Ile679Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2995
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25948
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile679Val
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

X-101971840-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971840
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971840
    reference: chr 0
allele count: 1
allele frequency: 1.173185668363875e-5
allele num: 85238
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2043A>G
  hgvsp: ENST00000543253.1:c.2043A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2043A>G
  hgvsp: ENST00000332262.5:c.2043A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2043A>G
  hgvsp: ENST00000535209.1:c.2043A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25778
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln681Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-101971854-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971854
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971854
    reference: chr 0
allele count: 1
allele frequency: 1.178772661904425e-5
allele num: 84834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2057C>A
  hgvsp: ENSP00000437394.1:p.Thr686Asn
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2057C>A
  hgvsp: ENSP00000339057.3:p.Thr686Asn
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2057C>A
  hgvsp: ENSP00000437872.1:p.Thr686Asn
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr686Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-101971869-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971869
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971869
    reference: chr 0
allele count: 1
allele frequency: 1.183796197646613e-5
allele num: 84474
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2072T>C
  hgvsp: ENSP00000339057.3:p.Val691Ala
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2072T>C
  hgvsp: ENSP00000437872.1:p.Val691Ala
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2072T>C
  hgvsp: ENSP00000437394.1:p.Val691Ala
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 129
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13152
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hgvs: p.Val691Ala
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

X-101971900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971900
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971900
    reference: chr 0
allele count: 2
allele frequency: 2.374338153239784e-5
allele num: 84234
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2103G>A
  hgvsp: ENST00000543253.1:c.2103G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2103G>A
  hgvsp: ENST00000535209.1:c.2103G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2103G>A
  hgvsp: ENST00000332262.5:c.2103G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2552
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  variant carriers: 0
hgvs: p.Arg701Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

X-101971912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971912
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971912
    reference: chr 0
allele count: 3
allele frequency: 3.559436659824639e-5
allele num: 84283
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2115C>T
  hgvsp: ENST00000535209.1:c.2115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2115C>T
  hgvsp: ENST00000543253.1:c.2115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2115C>T
  hgvsp: ENST00000332262.5:c.2115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11080
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13154
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6364
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25374
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His705His
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-101971917-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971917
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971917
    reference: chr 0
allele count: 21
allele frequency: 2.490394193823822e-4
allele num: 84324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2120C>G
  hgvsp: ENSP00000437394.1:p.Thr707Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2120C>G
  hgvsp: ENSP00000339057.3:p.Thr707Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2120C>G
  hgvsp: ENSP00000437872.1:p.Thr707Ser
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13164
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
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genotype quality: GenotypeQuality
  all individuals: 405
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 254
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genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
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genotype quality: GenotypeQuality
  all individuals: 2999
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
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genotype quality: GenotypeQuality
  all individuals: 25430
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 190
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genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 6360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr707Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

X-101971919-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971919
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971919
    reference: chr 0
allele count: 1
allele frequency: 1.184749899296259e-5
allele num: 84406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2122A>G
  hgvsp: ENSP00000339057.3:p.Met708Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2122A>G
  hgvsp: ENSP00000437872.1:p.Met708Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2122A>G
  hgvsp: ENSP00000437394.1:p.Met708Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7846
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6364
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1869
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
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genotype quality: GenotypeQuality
  all individuals: 23
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met708Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD

X-101971926-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971926
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971926
    reference: chr 0
allele count: 1
allele frequency: 1.182955970378782e-5
allele num: 84534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2129T>C
  hgvsp: ENSP00000339057.3:p.Ile710Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2129T>C
  hgvsp: ENSP00000437872.1:p.Ile710Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2129T>C
  hgvsp: ENSP00000437394.1:p.Ile710Thr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6370
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
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genotype quality: GenotypeQuality
  all individuals: 3000
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile710Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

X-101971936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971936
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971936
    reference: chr 0
allele count: 7
allele frequency: 8.26944204893147e-5
allele num: 84649
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2139C>T
  hgvsp: ENST00000332262.5:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2139C>T
  hgvsp: ENST00000535209.1:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2139C>T
  hgvsp: ENST00000543253.1:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 13154
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His713His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

X-101971945-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971945
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971945
    reference: chr 0
allele count: 1
allele frequency: 1.177204609933253e-5
allele num: 84947
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2148T>A
  hgvsp: ENST00000543253.1:c.2148T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2148T>A
  hgvsp: ENST00000332262.5:c.2148T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2148T>A
  hgvsp: ENST00000535209.1:c.2148T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 273
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 396
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2464
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genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile716Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

X-101971949-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971949
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971949
    reference: chr 0
allele count: 13
allele frequency: 1.526609986377942e-4
allele num: 85156
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2152A>G
  hgvsp: ENSP00000437872.1:p.Asn718Asp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2152A>G
  hgvsp: ENSP00000437394.1:p.Asn718Asp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2152A>G
  hgvsp: ENSP00000339057.3:p.Asn718Asp
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
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  variant carriers: 5
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 5.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2303
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 100
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 74
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn718Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

X-101971957-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971957
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971957
    reference: chr 0
allele count: 8
allele frequency: 9.364391899801007e-5
allele num: 85430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2160G>A
  hgvsp: ENSP00000437394.1:p.Met720Ile
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2160G>A
  hgvsp: ENSP00000339057.3:p.Met720Ile
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2160G>A
  hgvsp: ENSP00000437872.1:p.Met720Ile
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 360
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genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1868
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genotype quality: GenotypeQuality
  all individuals: 1142
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genotype quality: GenotypeQuality
  all individuals: 3011
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  variant carriers: 0
hgvs: p.Met720Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-101971958-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971958
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971958
    reference: chr 0
allele count: 5
allele frequency: 5.851512030708735e-5
allele num: 85448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2161T>C
  hgvsp: ENSP00000437394.1:p.Ser721Pro
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2161T>C
  hgvsp: ENSP00000339057.3:p.Ser721Pro
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2161T>C
  hgvsp: ENSP00000437872.1:p.Ser721Pro
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13148
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser721Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-101971960-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971960
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971960
    reference: chr 0
allele count: 1
allele frequency: 1.168893408610069e-5
allele num: 85551
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2163C>G
  hgvsp: ENST00000535209.1:c.2163C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2163C>G
  hgvsp: ENST00000332262.5:c.2163C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2163C>G
  hgvsp: ENST00000543253.1:c.2163C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2291
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser721Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

X-101971960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971960
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971960
    reference: chr 0
allele count: 751
allele frequency: 8.778389498661616e-3
allele num: 85551
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2163C>T
  hgvsp: ENST00000332262.5:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2163C>T
  hgvsp: ENST00000543253.1:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2163C>T
  hgvsp: ENST00000535209.1:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16755
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 7820
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 12278
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 448
genotype depth: GenotypeDepth
  all individuals: 270
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  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 73
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6394
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2985
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 45
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  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 218
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  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 26598
  bin: 6.25e1
  variant carriers: 4
hgvs: p.Ser721Ser
num of homozygotes: 11
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-101971961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971961
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971961
    reference: chr 0
allele count: 1
allele frequency: 1.167297007050474e-5
allele num: 85668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2164G>A
  hgvsp: ENSP00000437872.1:p.Gly722Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2164G>A
  hgvsp: ENSP00000437394.1:p.Gly722Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2164G>A
  hgvsp: ENSP00000339057.3:p.Gly722Arg
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12981
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3019
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly722Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

X-101971976-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971976
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971976
    reference: chr 0
allele count: 1
allele frequency: 1.157501186438716e-5
allele num: 86393
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2179T>C
  hgvsp: ENST00000543253.1:c.2179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2179T>C
  hgvsp: ENST00000332262.5:c.2179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2179T>C
  hgvsp: ENST00000535209.1:c.2179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 560
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu727Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-101971992-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971992
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971992
    reference: chr 0
allele count: 1
allele frequency: 1.150946653622605e-5
allele num: 86885
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2195C>T
  hgvsp: ENSP00000437394.1:p.Ala732Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2195C>T
  hgvsp: ENSP00000339057.3:p.Ala732Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2195C>T
  hgvsp: ENSP00000437872.1:p.Ala732Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 71
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  variant carriers: 0
hgvs: p.Ala732Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

X-101971999-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101971999
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101971999
    reference: chr 0
allele count: 1
allele frequency: 1.1490950876185e-5
allele num: 87025
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2202G>A
  hgvsp: ENST00000543253.1:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2202G>A
  hgvsp: ENST00000535209.1:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2202G>A
  hgvsp: ENST00000332262.5:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 650
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1888
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hgvs: p.Thr734Thr
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

X-101972008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972008
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972008
    reference: chr 0
allele count: 1
allele frequency: 1.148501205926266e-5
allele num: 87070
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2211C>T
  hgvsp: ENST00000543253.1:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2211C>T
  hgvsp: ENST00000535209.1:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2211C>T
  hgvsp: ENST00000332262.5:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12980
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genotype quality: GenotypeQuality
  all individuals: 2326
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hgvs: p.His737His
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-101972023-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972023
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972023
    reference: chr 0
allele count: 1
allele frequency: 1.150192082077707e-5
allele num: 86942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2226A>G
  hgvsp: ENST00000535209.1:c.2226A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2226A>G
  hgvsp: ENST00000543253.1:c.2226A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2226A>G
  hgvsp: ENST00000332262.5:c.2226A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6599
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu742Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

X-101972025-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972025
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972025
    reference: chr 0
allele count: 5
allele frequency: 5.756853534132384e-5
allele num: 86853
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2228T>C
  hgvsp: ENSP00000437394.1:p.Leu743Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2228T>C
  hgvsp: ENSP00000437872.1:p.Leu743Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2228T>C
  hgvsp: ENSP00000339057.3:p.Leu743Ser
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28469
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu743Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

X-101972030-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972030
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972030
    reference: chr 0
allele count: 1
allele frequency: 1.151503287541886e-5
allele num: 86843
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2233T>G
  hgvsp: ENSP00000339057.3:p.Leu745Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2233T>G
  hgvsp: ENSP00000437872.1:p.Leu745Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2233T>G
  hgvsp: ENSP00000437394.1:p.Leu745Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 104
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12977
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genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6574
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu745Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

X-101972042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972042
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972042
    reference: chr 0
allele count: 1
allele frequency: 1.156162926479599e-5
allele num: 86493
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2245C>T
  hgvsp: ENSP00000437872.1:p.Pro749Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2245C>T
  hgvsp: ENSP00000437394.1:p.Pro749Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2245C>T
  hgvsp: ENSP00000339057.3:p.Pro749Ser
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 395
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genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1888
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genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 101
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27885
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro749Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

X-101972046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972046
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972046
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 86385
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2249C>T
  hgvsp: ENSP00000437394.1:p.Ala750Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2249C>T
  hgvsp: ENSP00000339057.3:p.Ala750Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2249C>T
  hgvsp: ENSP00000437872.1:p.Ala750Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12975
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6516
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala750Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-101972052-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972052
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972053
    reference: chr 0
allele count: 1
allele frequency: 1.162101544432953e-5
allele num: 86051
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2262dupA
  hgvsp: ENSP00000437394.1:p.Leu755ThrfsTer15
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2262dupA
  hgvsp: ENSP00000339057.3:p.Leu755ThrfsTer15
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2262dupA
  hgvsp: ENSP00000437872.1:p.Leu755ThrfsTer15
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6457
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu755ThrfsTer15
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

X-101972094-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972094
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972094
    reference: chr 0
allele count: 1
allele frequency: 1.196615970036736e-5
allele num: 83569
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2297G>T
  hgvsp: ENSP00000437872.1:p.Gly766Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2297G>T
  hgvsp: ENSP00000339057.3:p.Gly766Val
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2297G>T
  hgvsp: ENSP00000437394.1:p.Gly766Val
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly766Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

X-101972108-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972108
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972108
    reference: chr 0
allele count: 1
allele frequency: 1.211563158787468e-5
allele num: 82538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2311G>C
  hgvsp: ENSP00000437394.1:p.Glu771Gln
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2311G>C
  hgvsp: ENSP00000339057.3:p.Glu771Gln
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2311G>C
  hgvsp: ENSP00000437872.1:p.Glu771Gln
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu771Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-101972109-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972109
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972109
    reference: chr 0
allele count: 1
allele frequency: 1.21190086650912e-5
allele num: 82515
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2312A>G
  hgvsp: ENSP00000437394.1:p.Glu771Gly
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2312A>G
  hgvsp: ENSP00000339057.3:p.Glu771Gly
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2312A>G
  hgvsp: ENSP00000437872.1:p.Glu771Gly
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 6322
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12977
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Glu771Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

X-101972144-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972144
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972144
    reference: chr 0
allele count: 1
allele frequency: 1.240664003374606e-5
allele num: 80602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2347A>T
  hgvsp: ENSP00000437394.1:p.Met783Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2347A>T
  hgvsp: ENSP00000339057.3:p.Met783Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2347A>T
  hgvsp: ENSP00000437872.1:p.Met783Leu
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met783Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-101972151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972151
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972151
    reference: chr 0
allele count: 4
allele frequency: 4.970549494246589e-5
allele num: 80474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2354A>G
  hgvsp: ENSP00000437394.1:p.Gln785Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2354A>G
  hgvsp: ENSP00000339057.3:p.Gln785Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2354A>G
  hgvsp: ENSP00000437872.1:p.Gln785Arg
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10100
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12980
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1885
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln785Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-101972166-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972166
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972166
    reference: chr 0
allele count: 5
allele frequency: 6.227037798119434e-5
allele num: 80295
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2369T>G
  hgvsp: ENSP00000437394.1:p.Ile790Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2369T>G
  hgvsp: ENSP00000339057.3:p.Ile790Ser
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2369T>G
  hgvsp: ENSP00000437872.1:p.Ile790Ser
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
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genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 50
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  variant carriers: 0
hgvs: p.Ile790Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

X-101972183-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972183
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972183
    reference: chr 0
allele count: 7
allele frequency: 8.724045963259304e-5
allele num: 80238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2386A>T
  hgvsp: ENSP00000339057.3:p.Met796Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2386A>T
  hgvsp: ENSP00000437394.1:p.Met796Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2386A>T
  hgvsp: ENSP00000437872.1:p.Met796Leu
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1189
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12982
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met796Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-101972193-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972193
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972193
    reference: chr 0
allele count: 5
allele frequency: 6.234103037254999e-5
allele num: 80204
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2396T>C
  hgvsp: ENSP00000437872.1:p.Ile799Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2396T>C
  hgvsp: ENSP00000437394.1:p.Ile799Thr
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2396T>C
  hgvsp: ENSP00000339057.3:p.Ile799Thr
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 560
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6322
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile799Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

X-101972206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972206
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972206
    reference: chr 0
allele count: 1
allele frequency: 1.247707337766853e-5
allele num: 80147
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2409C>T
  hgvsp: ENST00000332262.5:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2409C>T
  hgvsp: ENST00000535209.1:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2409C>T
  hgvsp: ENST00000543253.1:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe803Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-101972215-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972215
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972215
    reference: chr 0
allele count: 1
allele frequency: 1.248595330253465e-5
allele num: 80090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2418G>T
  hgvsp: ENSP00000437394.1:p.Glu806Asp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2418G>T
  hgvsp: ENSP00000339057.3:p.Glu806Asp
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2418G>T
  hgvsp: ENSP00000437872.1:p.Glu806Asp
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu806Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-101972217-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972217
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972217
    reference: chr 0
allele count: 5
allele frequency: 6.244692011789979e-5
allele num: 80068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2420C>T
  hgvsp: ENSP00000339057.3:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2420C>T
  hgvsp: ENSP00000437394.1:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2420C>T
  hgvsp: ENSP00000437872.1:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro807Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

X-101972234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972234
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972234
    reference: chr 0
allele count: 1
allele frequency: 1.25037511253376e-5
allele num: 79976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2437C>T
  hgvsp: ENSP00000437394.1:p.Arg813Cys
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2437C>T
  hgvsp: ENSP00000437872.1:p.Arg813Cys
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2437C>T
  hgvsp: ENSP00000339057.3:p.Arg813Cys
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
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genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1884
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 8
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genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2993
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12975
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genotype quality: GenotypeQuality
  all individuals: 24398
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg813Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-101972235-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972235
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972235
    reference: chr 0
allele count: 1
allele frequency: 1.250703520730411e-5
allele num: 79955
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2438G>A
  hgvsp: ENSP00000339057.3:p.Arg813His
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2438G>A
  hgvsp: ENSP00000437394.1:p.Arg813His
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2438G>A
  hgvsp: ENSP00000437872.1:p.Arg813His
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16316
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 4.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 15
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genotype quality: GenotypeQuality
  all individuals: 2322
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1152
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6301
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg813His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

X-101972264-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972264
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972264
    reference: chr 0
allele count: 1
allele frequency: 1.255823883258612e-5
allele num: 79629
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2467C>A
  hgvsp: ENSP00000437872.1:p.Gln823Lys
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2467C>A
  hgvsp: ENSP00000437394.1:p.Gln823Lys
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2467C>A
  hgvsp: ENSP00000339057.3:p.Gln823Lys
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 356
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2323
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  variant carriers: 0
hgvs: p.Gln823Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

X-101972274-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972274
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972274
    reference: chr 0
allele count: 2
allele frequency: 2.516514627241271e-5
allele num: 79475
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2477T>G
  hgvsp: ENSP00000437872.1:p.Ile826Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2477T>G
  hgvsp: ENSP00000437394.1:p.Ile826Arg
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2477T>G
  hgvsp: ENSP00000339057.3:p.Ile826Arg
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 153
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile826Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-101972281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972281
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972281
    reference: chr 0
allele count: 28
allele frequency: 3.527959075674722e-4
allele num: 79366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2484C>T
  hgvsp: ENST00000332262.5:c.2484C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2484C>T
  hgvsp: ENST00000535209.1:c.2484C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2484C>T
  hgvsp: ENST00000543253.1:c.2484C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 16
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 49
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Asn828Asn
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

X-101972282-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972282
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972282
    reference: chr 0
allele count: 1
allele frequency: 1.259842519685039e-5
allele num: 79375
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2485C>G
  hgvsp: ENSP00000437394.1:p.Gln829Glu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2485C>G
  hgvsp: ENSP00000437872.1:p.Gln829Glu
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2485C>G
  hgvsp: ENSP00000339057.3:p.Gln829Glu
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln829Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-101972306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972306
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972306
    reference: chr 0
allele count: 1
allele frequency: 1.26702565726956e-5
allele num: 78925
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2509C>T
  hgvsp: ENSP00000339057.3:p.Gln837Ter
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2509C>T
  hgvsp: ENSP00000437394.1:p.Gln837Ter
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2509C>T
  hgvsp: ENSP00000437872.1:p.Gln837Ter
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2322
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  variant carriers: 0
hgvs: p.Gln837Ter
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

X-101972312-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972312
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972312
    reference: chr 0
allele count: 1
allele frequency: 1.271197213535708e-5
allele num: 78666
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.2515T>A
  hgvsp: ENSP00000437872.1:p.Ter839LysextTer3
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.2515T>A
  hgvsp: ENSP00000339057.3:p.Ter839LysextTer3
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.2515T>A
  hgvsp: ENSP00000437394.1:p.Ter839LysextTer3
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: stop lost
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2314
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ter839LysextTer3
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

X-101972316-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972316
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972316
    reference: chr 0
allele count: 1
allele frequency: 1.274161283335245e-5
allele num: 78483
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*2A>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*2A>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*2A>T
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 12967
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-101972317-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972317
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972317
    reference: chr 0
allele count: 2
allele frequency: 2.548517400002549e-5
allele num: 78477
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*3T>G
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*3T>G
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*3T>G
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12967
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS

X-101972318-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
allele count: 1
allele frequency: 1.276210166290185e-5
allele num: 78357
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*4G>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-101972318-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
allele count: 1
allele frequency: 1.276210166290185e-5
allele num: 78357
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*4G>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*4G>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*4G>C
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 80
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-101972318-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972318
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 78357
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*4G>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*4G>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*4G>T
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: AC_Adj0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-101972320-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972320
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972320
    reference: chr 0
allele count: 2
allele frequency: 2.564135437633816e-5
allele num: 77999
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*6T>G
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*6T>G
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*6T>G
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 462
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

X-101972321-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972321
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972321
    reference: chr 0
allele count: 4
allele frequency: 5.141388174807198e-5
allele num: 77800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*7T>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*7T>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*7T>A
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 6
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD

X-101972322-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972322
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972322
    reference: chr 0
allele count: 1
allele frequency: 1.287448662984563e-5
allele num: 77673
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*8A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*8A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*8A>C
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1617
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-101972323-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972323
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972323
    reference: chr 0
allele count: 106
allele frequency: 1.37723150482031e-3
allele num: 76966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*9A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*9A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*9A>C
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 354
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  variant carriers: 6
genotype depth: GenotypeDepth
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  variant carriers: 10
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 14638
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 5.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5500
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12959
  bin: 9.75e1
  variant carriers: 152
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

X-101972325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972325
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972325
    reference: chr 0
allele count: 12
allele frequency: 1.541544627716973e-4
allele num: 77844
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*11C>T
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14226
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13734
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2971
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19072
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-101972326-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972326
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972326
    reference: chr 0
allele count: 2164
allele frequency: 2.929074174336762e-2
allele num: 73880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*12A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*12A>C
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*12A>C
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 2.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 3.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 3.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 14031
  bin: 2.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 4.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 5.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 5.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 9.75e1
  variant carriers: 562
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 17791
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 9.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 7.25e1
  variant carriers: 15
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-101972333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24101972333
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24101972333
    reference: chr 0
allele count: 1
allele frequency: 1.291922898041445e-5
allele num: 77404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437872
  ensembl transcript: ENST00000543253
  gene symbol: GPRASP2
  hgvsc: ENST00000543253.1:c.*19G>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000437394
  ensembl transcript: ENST00000535209
  gene symbol: GPRASP2
  hgvsc: ENST00000535209.1:c.*19G>A
  variant of: http://identifiers.org/hgnc/25169
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158301
  ensembl protein: ENSP00000339057
  ensembl transcript: ENST00000332262
  gene symbol: GPRASP2
  hgvsc: ENST00000332262.5:c.*19G>A
  variant of: http://identifiers.org/hgnc/25169
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8222
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 13181
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8357
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08554922938956e-5
allele num: 47949
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 2.086185e6

QD
type: SiteQuality
SIO_000300: 1.264e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.157e0

MQ
type: SiteQuality
SIO_000300: 5.271e1

VQSLOD
type: SiteQuality
SIO_000300: -2.185e0

FS
type: SiteQuality
SIO_000300: 1.893e0

MQRankSum
type: SiteQuality
SIO_000300: -3.064e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.286e0

GenotypeQuality
all individuals: 7114
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8357
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47949
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.286e0

VQSLOD
type: SiteQuality
SIO_000300: -2.185e0

MQ
type: SiteQuality
SIO_000300: 5.271e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -3.064e0

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 1.893e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.086185e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.157e0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085505735140772e-5
allele num: 47950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.986e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

DP
type: SiteQuality
SIO_000300: 2.086185e6

FS
type: SiteQuality
SIO_000300: 7.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

MQ
type: SiteQuality
SIO_000300: 5.851e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.526e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.33e-1

GenotypeQuality
all individuals: 7068
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8355
num of homozygotes: 0

European (Finnish)
type: Population
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 47952
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South Asian
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African
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Latino
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allele frequency: 4.292306041420754e-4
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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Other
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African
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South Asian
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East Asian
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allele frequency: 1.808318264014466e-3
allele num: 6636
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.086419495503766e-5
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South Asian
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Other
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African
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Latino
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ReadPosRankSum
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QD
type: SiteQuality
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ClippingRankSum
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
type: SiteQuality
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GenotypeQuality
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Other
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African
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East Asian
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allele frequency: 1.507159005275056e-4
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European (Non-Finnish)
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South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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FS
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QD
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ClippingRankSum
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MQ
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GenotypeQuality
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African
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East Asian
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allele frequency: 1.506931886678722e-4
allele num: 6636
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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VQSLOD
type: SiteQuality
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MQ
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QD
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FS
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InbreedingCoeff
type: SiteQuality
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DP
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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allele frequency: 9.926543577526305e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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DP
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InbreedingCoeff
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MQ
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VQSLOD
type: SiteQuality
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QD
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
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African
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East Asian
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European (Non-Finnish)
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allele frequency: 4.174493842621582e-5
allele num: 47910
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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FS
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DP
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
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QD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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allele frequency: 2.146613716861651e-4
allele num: 9317
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Other
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East Asian
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DP
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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Other
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European (Finnish)
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African
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South Asian
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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QD
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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Latino
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European (Non-Finnish)
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Other
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East Asian
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
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DP
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VQSLOD
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QD
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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Other
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East Asian
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European (Non-Finnish)
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FS
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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African
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South Asian
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European (Non-Finnish)
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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FS
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MQ
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DP
type: SiteQuality
SIO_000300: 2.042519e6

InbreedingCoeff
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SIO_000300: 2.67e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.405e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8491
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.104554255408704e-5
allele num: 47516
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9307
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Latino
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allele frequency: 1.074575542660649e-4
allele num: 9306
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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MQ
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ReadPosRankSum
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FS
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QD
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 605
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European (Non-Finnish)
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allele frequency: 2.107037505267594e-5
allele num: 47460
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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QD
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele frequency: 1.259604484191964e-4
allele num: 7939
num of homozygotes: 0

MQ
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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DP
type: SiteQuality
SIO_000300: 2.020511e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.331e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.115551418477226e-5
allele num: 47269
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 2.015837e6

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

South Asian
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allele frequency: 2.66844563042028e-4
allele num: 7495
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 2.358490566037736e-4
allele num: 8480
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.117701869930751e-5
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

European (Non-Finnish)
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allele count: 17
allele frequency: 3.598340530014393e-4
allele num: 47244
num of homozygotes: 0

Latino
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allele frequency: 1.075384449940854e-4
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num of homozygotes: 0

African
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allele frequency: 2.358212474943992e-4
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 2.207505518763797e-4
allele num: 4530
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
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QD
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.116043844428456e-5
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South Asian
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Other
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DP
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QD
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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Other
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African
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
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DP
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GenotypeQuality
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Latino
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European (Non-Finnish)
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allele frequency: 1.056970721911003e-4
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 2.358768722726737e-4
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ReadPosRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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Latino
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African
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Other
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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Other
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 9.428403064230996e-4
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.05e-2

DP
type: SiteQuality
SIO_000300: 2.037762e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.431e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.728e1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8485
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.544892108042855e-4
allele num: 6627
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8393
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9309
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47493
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.129999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.038509e6

MQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.75e1

FS
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.149e-1

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.104775736145314e-5
allele num: 47511
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.589e-1

DP
type: SiteQuality
SIO_000300: 2.091395e6

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

QD
type: SiteQuality
SIO_000300: 1.845e1

VQSLOD
type: SiteQuality
SIO_000300: 2.724e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
all individuals: 13437
bin: 9.75e1
variant carriers: 705

South Asian
type: Population
allele count: 55
allele frequency: 6.49120736456981e-3
allele num: 8473
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 286
allele frequency: 6.019658605375598e-3
allele num: 47511
num of homozygotes: 1

Other
type: Population
allele count: 3
allele frequency: 4.918032786885246e-3
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508523155830442e-4
allele num: 6629
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 2.36254295532646e-3
allele num: 9312
num of homozygotes: 0

African
type: Population
allele count: 380
allele frequency: 4.47796370492576e-2
allele num: 8486
num of homozygotes: 10

European (Finnish)
type: Population
allele count: 4
allele frequency: 8.830022075055188e-4
allele num: 4530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 2.091395e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.589e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.724e1

QD
type: SiteQuality
SIO_000300: 1.845e1

GenotypeQuality
all individuals: 2460
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103934357248054e-5
allele num: 47530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.502e0

QD
type: SiteQuality
SIO_000300: 2.156e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.45e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

DP
type: SiteQuality
SIO_000300: 2.035263e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.097755401720159e-5
allele num: 47670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 2.05068e6

QD
type: SiteQuality
SIO_000300: 1.719e1

GenotypeQuality
all individuals: 2328
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.049097775912715e-4
allele num: 9532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8473
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.759e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.598e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.453e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.33e-2

DP
type: SiteQuality
SIO_000300: 2.061199e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

GenotypeQuality
all individuals: 1153
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9677
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.092225290819315e-5
allele num: 47796
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.14e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.064112e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.398e1

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9725
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.091743886878491e-5
allele num: 47807
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8425
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.06528e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.098e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.98e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 2.803e1

GenotypeQuality
all individuals: 12980
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8359
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47790
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.033164583118091e-4
allele num: 9679
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.917e1

FS
type: SiteQuality
SIO_000300: 6.812e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.99e-1

DP
type: SiteQuality
SIO_000300: 2.062857e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.235e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9622
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47768
num of homozygotes: 0

East Asian
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allele count: 5
allele frequency: 7.535795026375283e-4
allele num: 6635
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.514e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

FS
type: SiteQuality
SIO_000300: 2.454e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.79e-1

DP
type: SiteQuality
SIO_000300: 2.061144e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.37e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 1.03982530934803e-4
allele num: 9617
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.363e1

MQ
type: SiteQuality
SIO_000300: 5.885e1

DP
type: SiteQuality
SIO_000300: 2.060459e6

VQSLOD
type: SiteQuality
SIO_000300: -4.95e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.67e-2

GenotypeQuality
all individuals: 1153
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47677
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.052051e6

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 7.994e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 2.049769e6

MQ
type: SiteQuality
SIO_000300: 5.861e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.29e-2

QD
type: SiteQuality
SIO_000300: 3.017e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.279e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8261
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.101458412138024e-5
allele num: 47586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.045671e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

FS
type: SiteQuality
SIO_000300: 4.826e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46855
num of homozygotes: 0

East Asian
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allele frequency: 1.511030522816561e-4
allele num: 6618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.999897e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.830000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.282e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.557e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.149797918995614e-5
allele num: 46516
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.98562e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

FS
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46506
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 589
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.444251877527441e-4
allele num: 6924
num of homozygotes: 0

InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.746e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5842
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8042
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 2.207505518763797e-4
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 7.27e0

InbreedingCoeff
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SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 1.961629e6

QD
type: SiteQuality
SIO_000300: 1.721e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8047
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European (Non-Finnish)
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allele count: 3
allele frequency: 6.5606753121788e-5
allele num: 45727
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 565
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.079214331966328e-4
allele num: 9266
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.69e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.959565e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.23e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45589
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 559
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 8.787346221441124e-4
allele num: 5690
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8117
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.74e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.986e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.955908e6

FS
type: SiteQuality
SIO_000300: 1.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 7
allele frequency: 1.538461538461539e-4
allele num: 45500
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.379e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

FS
type: SiteQuality
SIO_000300: 5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.735e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.95e-1

DP
type: SiteQuality
SIO_000300: 1.953519e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 8.797589460487827e-5
allele num: 45467
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Other
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allele count: 0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 1.079680414597279e-4
allele num: 9262
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
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allele num: 9264
num of homozygotes: 0

East Asian
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allele frequency: 1.528818223513224e-4
allele num: 6541
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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MQ
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DP
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele num: 4530
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African
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Latino
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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allele num: 45374
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MQRankSum
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FS
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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South Asian
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African
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Other
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East Asian
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Latino
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allele frequency: 3.239041243791838e-4
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European (Non-Finnish)
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allele frequency: 4.409754376681219e-5
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European (Finnish)
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allele frequency: 0.0e0
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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Latino
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South Asian
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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allele frequency: 2.20682349825661e-5
allele num: 45314
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele num: 9260
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European (Finnish)
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Other
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South Asian
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East Asian
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African
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European (Non-Finnish)
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DP
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MQ
type: SiteQuality
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ClippingRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
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SIO_000300: 5.1e-3

MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 3.478e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9253
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 553
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
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European (Non-Finnish)
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allele frequency: 4.437147801393264e-5
allele num: 45074
num of homozygotes: 0

ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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QD
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MQ
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.946e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

African
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allele frequency: 1.274047649382087e-4
allele num: 7849
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 5.402485143165856e-4
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 4.415011037527594e-4
allele num: 4530
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European (Non-Finnish)
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allele frequency: 4.44286475919673e-4
allele num: 45016
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InbreedingCoeff
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MQ
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ClippingRankSum
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VQSLOD
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QD
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FS
type: SiteQuality
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 45020
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Latino
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allele num: 9255
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South Asian
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allele frequency: 1.774937877174299e-4
allele num: 5634
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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Other
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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FS
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.231943576466387e-5
allele num: 44804
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African
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East Asian
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QD
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.627e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 2.23929059274022e-5
allele num: 44657
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South Asian
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 0.0e0
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VQSLOD
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MQ
type: SiteQuality
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FS
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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QD
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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East Asian
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Latino
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African
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allele frequency: 1.326787846623325e-4
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European (Non-Finnish)
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.542e0

GenotypeQuality
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variant carriers: 0

Latino
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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allele frequency: 4.489539373260304e-5
allele num: 44548
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European (Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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FS
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GenotypeQuality
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variant carriers: 2

East Asian
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European (Non-Finnish)
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allele frequency: 2.248201438848921e-5
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South Asian
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Latino
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European (Finnish)
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Other
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African
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 44480
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Latino
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East Asian
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Other
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South Asian
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African
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allele num: 7496
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MQ
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ClippingRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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Other
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

Latino
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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ClippingRankSum
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MQRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

African
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European (Finnish)
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Other
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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num of homozygotes: 0

ClippingRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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Other
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African
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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FS
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MQRankSum
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MQ
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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African
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allele count: 14
allele frequency: 1.969057665260197e-3
allele num: 7110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 31
allele frequency: 6.955351133049136e-3
allele num: 4457
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 1.282785477035849e-3
allele num: 43655
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.088731627653783e-4
allele num: 9185
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5590
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 5.607476635514018e-3
allele num: 535
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.554243083618278e-4
allele num: 6434
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.206e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

QD
type: SiteQuality
SIO_000300: 5.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.103e0

VQSLOD
type: SiteQuality
SIO_000300: -3.443e0

FS
type: SiteQuality
SIO_000300: 1.6395e1

DP
type: SiteQuality
SIO_000300: 1.867629e6

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44209
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.633764465622873e-3
allele num: 7345
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5585
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9201
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6441
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 545
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.907346e6

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e0

QD
type: SiteQuality
SIO_000300: 1.461e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.543e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 13927
bin: 9.75e1
variant carriers: 2183

Other
type: Population
allele count: 35
allele frequency: 6.986027944111776e-2
allele num: 501
num of homozygotes: 0

African
type: Population
allele count: 287
allele frequency: 4.334038054968287e-2
allele num: 6622
num of homozygotes: 0

Latino
type: Population
allele count: 55
allele frequency: 6.047278724573941e-3
allele num: 9095
num of homozygotes: 0

East Asian
type: Population
allele count: 60
allele frequency: 9.49367088607595e-3
allele num: 6320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1255
allele frequency: 3.016391866557708e-2
allele num: 41606
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 5.423973964924968e-4
allele num: 5531
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 469
allele frequency: 1.115338882282996e-1
allele num: 4205
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.271e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

FS
type: SiteQuality
SIO_000300: 2.8975e1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.821e0

DP
type: SiteQuality
SIO_000300: 1.940164e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.96e-2

QD
type: SiteQuality
SIO_000300: 4.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.27e-1